Gene annotation
Transcriptome id Sobic.007G127100.1
Synonym Sb07g020370
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
oxidoreductase, 2OG-FeII oxygenase domain containing protein, putative, expressed
UniProt C5YKX0
Pfam PF03171
Panther DB PTHR10209:SF163 PTHR10209
NCBI CDD KOG0143; Iron/ascorbate family oxidoreductases
KEGG Orthology -
Gene Ontology GO:0016491; oxidoreductase activity


Orthologs (automatic annotation)
TAIR AT1G52820 : 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
RAP-DB (Rice) LOC_Os08g32170.1 : oxidoreductase, 2OG-FeII oxygenase domain containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a031038
Brachypodium KQJ98283 , KQJ98279
Barley HORVU0Hr1G017000.6 , HORVU0Hr1G017000.7 , HORVU0Hr1G017000.4 , HORVU0Hr1G017000.5 , HORVU0Hr1G017000.2 , HORVU0Hr1G017000.3 , HORVU0Hr1G017000.1 , HORVU2Hr1G011660.2 , HORVU2Hr1G011660.3 , HORVU2Hr1G011660.1 , HORVU4Hr1G069300.1
Wheat TraesCS2B02G073900 , TraesCS2A02G060400 , TraesCS4D02G253800
Populus -


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cDNA sequences
Sobic.007G127100


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G416300 glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
2 Sobic.002G327300 expressed protein -
3 Sobic.010G008400 bark storage protein A precursor, putative, expressed -
4 Sobic.008G128900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@DNA-directed RNA polymerase II subunit RPB9, putative, expressed K03017: RPB9, DNA-directed RNA polymerase II subunit RPB9
5 Sobic.009G065300 expressed protein -
6 Sobic.001G432700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
7 Sobic.002G407100 expressed protein -
8 Sobic.004G064400 class I glutamine amidotransferase, putative, expressed -
9 Sobic.009G121900 Annexin arabidopsis 4(PubMedID : 26320239)@annexin, putative, expressed -
10 Sobic.007G211700 60S ribosomal protein L31, putative, expressed K02910: RP-L31e, large subunit ribosomal protein L31e
11 Sobic.002G327100 expressed protein -
12 Sobic.003G264600 glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
13 Sobic.007G178900 CXE carboxylesterase, putative, expressed -
14 Sobic.004G046200 sulfotransferase domain containing protein, expressed -
15 Sobic.002G003800 plastocyanin-like domain containing protein, putative, expressed -
16 Sobic.005G168800 DJ-1 family protein, putative, expressed K18881: D-lactate dehydratase
17 Sobic.003G228200 cytochrome P450 72A1, putative, expressed -
18 Sobic.010G251600 60S acidic ribosomal protein, putative, expressed K02942: RP-LP1, large subunit ribosomal protein LP1
19 Sobic.009G105700 60S ribosomal protein L29-2, putative, expressed K02905: RP-L29e, large subunit ribosomal protein L29e
20 Sobic.003G050200 embryo-specific 3, putative, expressed -


Gene co-expression network
sample Sobic007G127100 Sobic007G127100 Sobic003G416300 Sobic003G416300 Sobic007G127100--Sobic003G416300 Sobic002G327300 Sobic002G327300 Sobic007G127100--Sobic002G327300 Sobic010G008400 Sobic010G008400 Sobic007G127100--Sobic010G008400 Sobic008G128900 Sobic008G128900 Sobic007G127100--Sobic008G128900 Sobic009G065300 Sobic009G065300 Sobic007G127100--Sobic009G065300 Sobic001G432700 Sobic001G432700 Sobic007G127100--Sobic001G432700 Sobic002G407100 Sobic002G407100 Sobic007G127100--Sobic002G407100 Sobic004G064400 Sobic004G064400 Sobic007G127100--Sobic004G064400 Sobic009G121900 Sobic009G121900 Sobic007G127100--Sobic009G121900 Sobic005G168800 Sobic005G168800 Sobic003G416300--Sobic005G168800 Sobic003G416300--Sobic002G327300 Sobic004G046200 Sobic004G046200 Sobic003G416300--Sobic004G046200 Sobic003G050200 Sobic003G050200 Sobic003G416300--Sobic003G050200 Sobic002G312900 Sobic002G312900 Sobic003G416300--Sobic002G312900 Sobic003G416300--Sobic007G127100 Sobic003G079400 Sobic003G079400 Sobic003G416300--Sobic003G079400 Sobic008G106700 Sobic008G106700 Sobic003G416300--Sobic008G106700 Sobic001G082600 Sobic001G082600 Sobic003G416300--Sobic001G082600 Sobic002G327300--Sobic010G008400 Sobic003G264600 Sobic003G264600 Sobic002G327300--Sobic003G264600 Sobic002G327300--Sobic004G046200 Sobic003G084400 Sobic003G084400 Sobic002G327300--Sobic003G084400 Sobic003G228200 Sobic003G228200 Sobic002G327300--Sobic003G228200 Sobic003G319500 Sobic003G319500 Sobic002G327300--Sobic003G319500 Sobic002G327100 Sobic002G327100 Sobic002G327300--Sobic002G327100 Sobic001G500000 Sobic001G500000 Sobic002G327300--Sobic001G500000 Sobic002G017800 Sobic002G017800 Sobic002G327300--Sobic002G017800 Sobic002G176100 Sobic002G176100 Sobic010G008400--Sobic002G176100 Sobic002G003800 Sobic002G003800 Sobic010G008400--Sobic002G003800 Sobic010G008400--Sobic003G319500 Sobic010G008400--Sobic002G327300 Sobic010G008400--Sobic004G046200 Sobic010G008400--Sobic001G500000 Sobic010G085800 Sobic010G085800 Sobic010G008400--Sobic010G085800 Sobic010G008400--Sobic002G017800 Sobic009G111000 Sobic009G111000 Sobic010G008400--Sobic009G111000 Sobic008G128900--Sobic002G312900 Sobic007G161400 Sobic007G161400 Sobic008G128900--Sobic007G161400 Sobic008G128900--Sobic003G416300 Sobic001G494000 Sobic001G494000 Sobic008G128900--Sobic001G494000 Sobic005G043000 Sobic005G043000 Sobic008G128900--Sobic005G043000 Sobic008G128900--Sobic007G127100 Sobic003G363800 Sobic003G363800 Sobic008G128900--Sobic003G363800 Sobic010G195500 Sobic010G195500 Sobic008G128900--Sobic010G195500 Sobic003G280400 Sobic003G280400 Sobic008G128900--Sobic003G280400 Sobic009G065300--Sobic002G327300 Sobic001G234800 Sobic001G234800 Sobic009G065300--Sobic001G234800 Sobic009G065300--Sobic002G327100 Sobic009G065300--Sobic003G228200 Sobic009G065300--Sobic003G416300 Sobic003G037500 Sobic003G037500 Sobic009G065300--Sobic003G037500 Sobic009G065300--Sobic007G127100 Sobic001G318500 Sobic001G318500 Sobic009G065300--Sobic001G318500 Sobic002G302500 Sobic002G302500 Sobic009G065300--Sobic002G302500 Sobic001G432700--Sobic002G407100 Sobic001G432700--Sobic007G127100 Sobic001G403300 Sobic001G403300 Sobic001G432700--Sobic001G403300 Sobic006G068800 Sobic006G068800 Sobic001G432700--Sobic006G068800 Sobic001G432700--Sobic009G065300 Sobic001G432700--Sobic010G195500 Sobic005G080200 Sobic005G080200 Sobic001G432700--Sobic005G080200 Sobic001G432700--Sobic002G327300 Sobic004G302200 Sobic004G302200 Sobic001G432700--Sobic004G302200 Sobic001G397300 Sobic001G397300 Sobic002G407100--Sobic001G397300 Sobic007G178000 Sobic007G178000 Sobic002G407100--Sobic007G178000 Sobic002G407100--Sobic009G121900 Sobic002G407100--Sobic002G327300 Sobic002G250000 Sobic002G250000 Sobic002G407100--Sobic002G250000 Sobic002G407100--Sobic001G432700 Sobic007G006300 Sobic007G006300 Sobic002G407100--Sobic007G006300 Sobic002G327201 Sobic002G327201 Sobic002G407100--Sobic002G327201 Sobic009G074100 Sobic009G074100 Sobic002G407100--Sobic009G074100 Sobic003G119500 Sobic003G119500 Sobic004G064400--Sobic003G119500 Sobic004G064400--Sobic002G407100 Sobic004G064400--Sobic007G127100 Sobic004G064400--Sobic009G121900 Sobic009G109000 Sobic009G109000 Sobic004G064400--Sobic009G109000 Sobic004G064400--Sobic010G008400 Sobic004G064400--Sobic002G327300 Sobic004G064400--Sobic002G327100 Sobic004G064400--Sobic002G176100 Sobic009G121900--Sobic002G407100 Sobic009G121900--Sobic007G127100 Sobic009G121900--Sobic004G064400 Sobic009G121900--Sobic010G008400 Sobic009G121900--Sobic002G327300 Sobic009G121900--Sobic009G065300 Sobic003G110200 Sobic003G110200 Sobic009G121900--Sobic003G110200 Sobic009G121900--Sobic001G432700 Sobic003G376100 Sobic003G376100 Sobic009G121900--Sobic003G376100
Octagon: transcription factors


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