Gene annotation
| Transcriptome id | Sobic.009G121900.3,Sobic.009G121900.1,Sobic.009G121900.2 |
|---|---|
| Synonym | ANNAT4, Sb09g018970 |
| Functional annotation | Annexin arabidopsis 4 (PubMedID : 26320239) annexin, putative, expressed |
| UniProt | A0A1B6P848 , A0A1B6P820 , A0A1B6P8E4 |
| Pfam | PF00191 |
| Panther DB | PTHR10502 PTHR10502:SF124 |
| NCBI CDD | KOG0819; Annexin |
| KEGG Orthology | - |
| Gene Ontology | GO:0005544; calcium-dependent phospholipid binding GO:0005509calcium ion binding |
Orthologs (automatic annotation)
| TAIR | AT2G38750 : annexin 4 |
|---|---|
| RAP-DB (Rice) | LOC_Os05g31750.1 : annexin, putative, expressed |
| MaizeGDB (Corn) | Zm00025a043518 , Zm00025a002528 |
| Brachypodium | KQK06514 , PNT77408 , KQK06513 |
| Barley | HORVU1Hr1G057170.20 , HORVU1Hr1G057170.21 , HORVU1Hr1G057180.1 , HORVU1Hr1G057170.2 , HORVU1Hr1G057170.3 , HORVU1Hr1G057170.1 , HORVU1Hr1G057170.5 , HORVU1Hr1G057170.4 , HORVU1Hr1G057170.7 , HORVU1Hr1G057170.8 , HORVU1Hr1G057170.6 , HORVU1Hr1G057170.13 , HORVU1Hr1G057170.12 , HORVU1Hr1G057170.11 , HORVU1Hr1G057170.10 , HORVU1Hr1G057170.17 , HORVU1Hr1G057170.16 , HORVU1Hr1G057170.15 , HORVU1Hr1G057170.14 , HORVU1Hr1G057170.19 , HORVU1Hr1G057170.18 , HORVU1Hr1G057170.9 , HORVU4Hr1G074130.2 |
| Wheat | TraesCS4D02G278600 , TraesCS1B02G251800 , TraesCS1D02G239800 , TraesCS1D02G239800 , TraesCS4B02G280100 , TraesCS4A02G023400 , TraesCS1A02G239600 |
| Populus | - |
JBrowse
Expression pattern by RNA-Seq analysis
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Find similar expressed genes
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| Rank | Gene | Function | KEGG orthology |
|---|---|---|---|
| 1 | Sobic.002G407100 | expressed protein | - |
| 2 | Sobic.007G127100 | SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@oxidoreductase, 2OG-FeII oxygenase domain containing protein, putative, expressed | - |
| 3 | Sobic.004G064400 | class I glutamine amidotransferase, putative, expressed | - |
| 4 | Sobic.010G008400 | bark storage protein A precursor, putative, expressed | - |
| 5 | Sobic.002G327300 | expressed protein | - |
| 6 | Sobic.009G065300 | expressed protein | - |
| 7 | Sobic.003G110200 | NADP-dependent oxidoreductase, putative, expressed | K07119: PTGR3, prostaglandin reductase 3 |
| 8 | Sobic.001G432700 | SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein | - |
| 9 | Sobic.003G376100 | 4,5-DOPA dioxygenase extradiol, putative, expressed | K15777: 4,5-DOPA dioxygenase extradiol |
| 10 | Sobic.004G302200 | "domain confirmed by Pfam database, expression supported by NCBI EST database"(PubMedID : 20499123)@SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@OsSAUR11 - Auxin-responsive SAUR gene family member, expressed | K14488: SAUR family protein |
| 11 | Sobic.003G416300 | glutathione S-transferase, putative, expressed | K00799: GST, glutathione S-transferase |
| 12 | Sobic.001G052000 | aspartic proteinase nepenthesin-1 precursor, putative, expressed | - |
| 13 | Sobic.002G176100 | membrane protein, putative, expressed | - |
| 14 | Sobic.005G186100 | SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@patatin, putative, expressed | - |
| 15 | Sobic.001G061101 | - | - |
| 16 | Sobic.001G449700 | highly upregulated during chilling in a chilling tolerant sorghum NSG(PubMedID : 29293808)@cytochrome P450, putative, expressed | K01723: hydroperoxide dehydratase |
| 17 | Sobic.002G327100 | expressed protein | - |
| 18 | Sobic.004G286000 | SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@protein kinase domain containing protein, expressed | - |
| 19 | Sobic.003G319500 | receptor protein kinase, putative, expressed | - |
| 20 | Sobic.001G397300 | Up-reguralion under heat(PubMedID : 24916767)@expressed protein | - |
Gene co-expression network
Octagon: transcription factors
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