Gene annotation
Transcriptome id Sobic.004G302200.1
Synonym Sb04g033550, SbSAUR38;small auxin up RNA, small auxin up RNA, SbSAUR38
Functional annotation "domain confirmed by Pfam database, expression supported by NCBI EST database" (PubMedID : 20499123)
SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence. (PubMedID : 27586543)
OsSAUR11 - Auxin-responsive SAUR gene family member, expressed
UniProt C5XS51
Pfam PF02519
Panther DB PTHR31374 PTHR31374:SF56
NCBI CDD -
KEGG Orthology K14488; SAUR family protein
Gene Ontology GO:0009733; response to auxin


Orthologs (automatic annotation)
TAIR AT2G45210 : SAUR-like auxin-responsive protein family
RAP-DB (Rice) LOC_Os02g42990.1 : OsSAUR11 - Auxin-responsive SAUR gene family member, expressed
MaizeGDB (Corn) Zm00025a020962 , Zm00025a056604 , Zm00025a010423 , Zm00025a032144
Brachypodium KQK00528
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G136000 expressed protein -
2 Sobic.003G320800 peroxidase precursor, putative, expressed K00430: peroxidase
3 Sobic.010G268400 eukaryotic aspartyl protease domain containing protein, expressed -
4 Sobic.001G432700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
5 Sobic.003G135700 - -
6 Sobic.002G407100 expressed protein -
7 Sobic.002G319500 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@AAA family ATPase, putative, expressed K08900: mitochondrial chaperone BCS1
8 Sobic.002G373001 - -
9 Sobic.009G065300 expressed protein -
10 Sobic.005G093000 - -
11 Sobic.002G082600 DUF567 domain containing protein, putative, expressed -
12 Sobic.001G226800 zinc finger family protein, putative, expressed -
13 Sobic.007G127100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@oxidoreductase, 2OG-FeII oxygenase domain containing protein, putative, expressed -
14 Sobic.009G121900 Annexin arabidopsis 4(PubMedID : 26320239)@annexin, putative, expressed -
15 Sobic.002G092801 - -
16 Sobic.003G021500 sodium/calcium exchanger protein, putative, expressed -
17 Sobic.010G195500 reductase, putative, expressed -
18 Sobic.001G516600 AMP-binding domain containing protein, expressed K10526: OPC-8:0 CoA ligase 1
19 Sobic.006G131600 OsCML22 - Calmodulin-related calcium sensor protein, expressed K13448: calcium-binding protein CML
20 Sobic.001G449700 highly upregulated during chilling in a chilling tolerant sorghum NSG(PubMedID : 29293808)@cytochrome P450, putative, expressed K01723: hydroperoxide dehydratase


Gene co-expression network
sample Sobic004G302200 Sobic004G302200 Sobic010G136000 Sobic010G136000 Sobic004G302200--Sobic010G136000 Sobic003G320800 Sobic003G320800 Sobic004G302200--Sobic003G320800 Sobic010G268400 Sobic010G268400 Sobic004G302200--Sobic010G268400 Sobic001G432700 Sobic001G432700 Sobic004G302200--Sobic001G432700 Sobic003G135700 Sobic003G135700 Sobic004G302200--Sobic003G135700 Sobic002G407100 Sobic002G407100 Sobic004G302200--Sobic002G407100 Sobic002G319500 Sobic002G319500 Sobic004G302200--Sobic002G319500 Sobic002G373001 Sobic002G373001 Sobic004G302200--Sobic002G373001 Sobic009G065300 Sobic009G065300 Sobic004G302200--Sobic009G065300 Sobic010G066700 Sobic010G066700 Sobic010G136000--Sobic010G066700 Sobic007G025500 Sobic007G025500 Sobic010G136000--Sobic007G025500 Sobic009G183400 Sobic009G183400 Sobic010G136000--Sobic009G183400 Sobic010G136000--Sobic003G320800 Sobic007G057000 Sobic007G057000 Sobic010G136000--Sobic007G057000 Sobic004G340900 Sobic004G340900 Sobic010G136000--Sobic004G340900 Sobic001G038900 Sobic001G038900 Sobic010G136000--Sobic001G038900 Sobic004G259366 Sobic004G259366 Sobic010G136000--Sobic004G259366 Sobic002G188900 Sobic002G188900 Sobic010G136000--Sobic002G188900 Sobic007G155000 Sobic007G155000 Sobic003G320800--Sobic007G155000 Sobic003G320800--Sobic010G136000 Sobic003G033900 Sobic003G033900 Sobic003G320800--Sobic003G033900 Sobic003G021500 Sobic003G021500 Sobic003G320800--Sobic003G021500 Sobic007G036900 Sobic007G036900 Sobic003G320800--Sobic007G036900 Sobic003G320800--Sobic002G188900 Sobic003G320800--Sobic002G319500 Sobic006G234800 Sobic006G234800 Sobic003G320800--Sobic006G234800 Sobic001G435000 Sobic001G435000 Sobic003G320800--Sobic001G435000 Sobic002G329000 Sobic002G329000 Sobic010G268400--Sobic002G329000 Sobic001G516600 Sobic001G516600 Sobic010G268400--Sobic001G516600 Sobic003G192100 Sobic003G192100 Sobic010G268400--Sobic003G192100 Sobic005G093000 Sobic005G093000 Sobic010G268400--Sobic005G093000 Sobic001G107400 Sobic001G107400 Sobic010G268400--Sobic001G107400 Sobic003G037800 Sobic003G037800 Sobic010G268400--Sobic003G037800 Sobic002G245100 Sobic002G245100 Sobic010G268400--Sobic002G245100 Sobic003G429000 Sobic003G429000 Sobic010G268400--Sobic003G429000 Sobic010G195500 Sobic010G195500 Sobic010G268400--Sobic010G195500 Sobic001G432700--Sobic002G407100 Sobic007G127100 Sobic007G127100 Sobic001G432700--Sobic007G127100 Sobic001G403300 Sobic001G403300 Sobic001G432700--Sobic001G403300 Sobic006G068800 Sobic006G068800 Sobic001G432700--Sobic006G068800 Sobic001G432700--Sobic009G065300 Sobic001G432700--Sobic010G195500 Sobic005G080200 Sobic005G080200 Sobic001G432700--Sobic005G080200 Sobic002G327300 Sobic002G327300 Sobic001G432700--Sobic002G327300 Sobic001G432700--Sobic004G302200 Sobic003G135700--Sobic010G268400 Sobic003G135700--Sobic003G192100 Sobic003G135700--Sobic007G025500 Sobic003G135700--Sobic010G136000 Sobic002G082600 Sobic002G082600 Sobic003G135700--Sobic002G082600 Sobic003G135700--Sobic001G107400 Sobic003G135700--Sobic002G373001 Sobic008G032100 Sobic008G032100 Sobic003G135700--Sobic008G032100 Sobic002G312400 Sobic002G312400 Sobic003G135700--Sobic002G312400 Sobic001G397300 Sobic001G397300 Sobic002G407100--Sobic001G397300 Sobic007G178000 Sobic007G178000 Sobic002G407100--Sobic007G178000 Sobic009G121900 Sobic009G121900 Sobic002G407100--Sobic009G121900 Sobic002G407100--Sobic002G327300 Sobic002G250000 Sobic002G250000 Sobic002G407100--Sobic002G250000 Sobic002G407100--Sobic001G432700 Sobic007G006300 Sobic007G006300 Sobic002G407100--Sobic007G006300 Sobic002G327201 Sobic002G327201 Sobic002G407100--Sobic002G327201 Sobic009G074100 Sobic009G074100 Sobic002G407100--Sobic009G074100 Sobic002G192000 Sobic002G192000 Sobic002G319500--Sobic002G192000 Sobic002G319500--Sobic003G320800 Sobic001G192600 Sobic001G192600 Sobic002G319500--Sobic001G192600 Sobic002G319500--Sobic010G136000 Sobic002G319500--Sobic001G038900 Sobic002G140400 Sobic002G140400 Sobic002G319500--Sobic002G140400 Sobic003G430400 Sobic003G430400 Sobic002G319500--Sobic003G430400 Sobic002G319500--Sobic007G155000 Sobic001G367600 Sobic001G367600 Sobic002G319500--Sobic001G367600 Sobic001G449700 Sobic001G449700 Sobic002G373001--Sobic001G449700 Sobic002G034500 Sobic002G034500 Sobic002G373001--Sobic002G034500 Sobic002G373001--Sobic003G021500 Sobic002G373001--Sobic002G319500 Sobic003G102200 Sobic003G102200 Sobic002G373001--Sobic003G102200 Sobic002G070200 Sobic002G070200 Sobic002G373001--Sobic002G070200 Sobic002G373001--Sobic002G082600 Sobic002G333400 Sobic002G333400 Sobic002G373001--Sobic002G333400 Sobic004G095600 Sobic004G095600 Sobic002G373001--Sobic004G095600 Sobic009G065300--Sobic002G327300 Sobic001G234800 Sobic001G234800 Sobic009G065300--Sobic001G234800 Sobic002G327100 Sobic002G327100 Sobic009G065300--Sobic002G327100 Sobic003G228200 Sobic003G228200 Sobic009G065300--Sobic003G228200 Sobic003G416300 Sobic003G416300 Sobic009G065300--Sobic003G416300 Sobic003G037500 Sobic003G037500 Sobic009G065300--Sobic003G037500 Sobic009G065300--Sobic007G127100 Sobic001G318500 Sobic001G318500 Sobic009G065300--Sobic001G318500 Sobic002G302500 Sobic002G302500 Sobic009G065300--Sobic002G302500
Octagon: transcription factors


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