Gene annotation
Transcriptome id Sobic.002G373001.1
Synonym -
Functional annotation -
UniProt A0A1W0W784
Pfam PF07911
Panther DB PTHR33108 PTHR33108:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G72510 : Protein of unknown function (DUF1677)
RAP-DB (Rice) LOC_Os07g42220.1 : expressed protein
MaizeGDB (Corn) Zm00025a048742
Brachypodium KQK19131
Barley HORVU7Hr1G034120.2 , HORVU7Hr1G034120.1
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G449700 highly upregulated during chilling in a chilling tolerant sorghum NSG(PubMedID : 29293808)@cytochrome P450, putative, expressed K01723: hydroperoxide dehydratase
2 Sobic.002G034500 ERD4 protein, putative, expressed -
3 Sobic.003G021500 sodium/calcium exchanger protein, putative, expressed -
4 Sobic.002G319500 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@AAA family ATPase, putative, expressed K08900: mitochondrial chaperone BCS1
5 Sobic.003G102200 helix-loop-helix DNA-binding domain containing protein, expressed -
6 Sobic.002G070200 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@LTPL84 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
7 Sobic.002G082600 DUF567 domain containing protein, putative, expressed -
8 Sobic.002G333400 KI domain interacting kinase 1, putative, expressed -
9 Sobic.004G095600 NBS-LRR type disease resistance protein, putative, expressed -
10 Sobic.001G407800 leucoanthocyanidin dioxygenase, putative, expressed -
11 Sobic.010G267600 similar to Putative senescence-associated protein(PubMedID : 29862293)@senescence-associated protein, putative, expressed -
12 Sobic.003G202200 uncharacterized protein PA4923, putative, expressed K06966: pyrimidine/purine-5'-nucleotide nucleosidase
13 Sobic.007G123300 C1-like domain containing protein, expressed -
14 Sobic.004G186500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@gibberellin receptor GID1L2, putative, expressed -
15 Sobic.010G217900 diphthamide biosynthesis protein 3, putative, expressed K15455: DPH3, diphthamide biosynthesis protein 3
16 Sobic.005G109000 cytochrome P450, putative, expressed -
17 Sobic.003G162700 expressed protein -
18 Sobic.007G149300 expressed protein -
19 Sobic.009G036000 similar to Hydrophobic protein LTI6B(PubMedID : 29862293)@OsRCI2-6 - Hydrophobic protein LTI6B, expressed -
20 Sobic.001G383700 OsCML27 - Calmodulin-related calcium sensor protein, expressed K13448: calcium-binding protein CML


Gene co-expression network
sample Sobic002G373001 Sobic002G373001 Sobic001G449700 Sobic001G449700 Sobic002G373001--Sobic001G449700 Sobic002G034500 Sobic002G034500 Sobic002G373001--Sobic002G034500 Sobic003G021500 Sobic003G021500 Sobic002G373001--Sobic003G021500 Sobic002G319500 Sobic002G319500 Sobic002G373001--Sobic002G319500 Sobic003G102200 Sobic003G102200 Sobic002G373001--Sobic003G102200 Sobic002G070200 Sobic002G070200 Sobic002G373001--Sobic002G070200 Sobic002G082600 Sobic002G082600 Sobic002G373001--Sobic002G082600 Sobic002G333400 Sobic002G333400 Sobic002G373001--Sobic002G333400 Sobic004G095600 Sobic004G095600 Sobic002G373001--Sobic004G095600 Sobic001G383700 Sobic001G383700 Sobic001G449700--Sobic001G383700 Sobic003G202200 Sobic003G202200 Sobic001G449700--Sobic003G202200 Sobic003G110200 Sobic003G110200 Sobic001G449700--Sobic003G110200 Sobic007G149300 Sobic007G149300 Sobic001G449700--Sobic007G149300 Sobic001G449700--Sobic003G021500 Sobic009G036000 Sobic009G036000 Sobic001G449700--Sobic009G036000 Sobic001G449700--Sobic002G333400 Sobic001G259700 Sobic001G259700 Sobic001G449700--Sobic001G259700 Sobic005G186100 Sobic005G186100 Sobic001G449700--Sobic005G186100 Sobic002G034500--Sobic003G021500 Sobic002G034500--Sobic002G373001 Sobic002G034500--Sobic002G082600 Sobic005G228000 Sobic005G228000 Sobic002G034500--Sobic005G228000 Sobic001G234300 Sobic001G234300 Sobic002G034500--Sobic001G234300 Sobic001G019900 Sobic001G019900 Sobic002G034500--Sobic001G019900 Sobic002G034500--Sobic001G449700 Sobic002G092801 Sobic002G092801 Sobic002G034500--Sobic002G092801 Sobic002G312400 Sobic002G312400 Sobic002G034500--Sobic002G312400 Sobic003G364600 Sobic003G364600 Sobic003G021500--Sobic003G364600 Sobic003G021500--Sobic003G202200 Sobic003G021500--Sobic001G449700 Sobic003G021500--Sobic009G036000 Sobic003G320800 Sobic003G320800 Sobic003G021500--Sobic003G320800 Sobic003G021500--Sobic001G383700 Sobic003G021500--Sobic002G034500 Sobic003G021500--Sobic002G082600 Sobic003G021500--Sobic002G312400 Sobic002G192000 Sobic002G192000 Sobic002G319500--Sobic002G192000 Sobic002G319500--Sobic003G320800 Sobic001G192600 Sobic001G192600 Sobic002G319500--Sobic001G192600 Sobic010G136000 Sobic010G136000 Sobic002G319500--Sobic010G136000 Sobic001G038900 Sobic001G038900 Sobic002G319500--Sobic001G038900 Sobic002G140400 Sobic002G140400 Sobic002G319500--Sobic002G140400 Sobic003G430400 Sobic003G430400 Sobic002G319500--Sobic003G430400 Sobic007G155000 Sobic007G155000 Sobic002G319500--Sobic007G155000 Sobic001G367600 Sobic001G367600 Sobic002G319500--Sobic001G367600 Sobic003G102200--Sobic001G449700 Sobic003G102200--Sobic003G110200 Sobic001G195100 Sobic001G195100 Sobic003G102200--Sobic001G195100 Sobic003G102200--Sobic001G259700 Sobic003G102200--Sobic001G383700 Sobic003G102200--Sobic007G149300 Sobic002G342400 Sobic002G342400 Sobic003G102200--Sobic002G342400 Sobic003G102200--Sobic002G373001 Sobic003G250600 Sobic003G250600 Sobic003G102200--Sobic003G250600 Sobic004G186500 Sobic004G186500 Sobic002G070200--Sobic004G186500 Sobic003G162700 Sobic003G162700 Sobic002G070200--Sobic003G162700 Sobic002G070200--Sobic002G373001 Sobic002G070200--Sobic002G333400 Sobic001G407800 Sobic001G407800 Sobic002G070200--Sobic001G407800 Sobic008G044300 Sobic008G044300 Sobic002G070200--Sobic008G044300 Sobic002G070200--Sobic001G192600 Sobic002G070200--Sobic001G449700 Sobic002G070200--Sobic005G186100 Sobic002G082600--Sobic009G036000 Sobic009G036100 Sobic009G036100 Sobic002G082600--Sobic009G036100 Sobic009G159400 Sobic009G159400 Sobic002G082600--Sobic009G159400 Sobic001G320900 Sobic001G320900 Sobic002G082600--Sobic001G320900 Sobic004G065500 Sobic004G065500 Sobic002G082600--Sobic004G065500 Sobic003G387000 Sobic003G387000 Sobic002G082600--Sobic003G387000 Sobic002G082600--Sobic001G407800 Sobic003G334600 Sobic003G334600 Sobic002G082600--Sobic003G334600 Sobic010G086200 Sobic010G086200 Sobic002G082600--Sobic010G086200 Sobic002G333400--Sobic001G407800 Sobic006G158600 Sobic006G158600 Sobic002G333400--Sobic006G158600 Sobic006G056400 Sobic006G056400 Sobic002G333400--Sobic006G056400 Sobic008G136400 Sobic008G136400 Sobic002G333400--Sobic008G136400 Sobic002G333400--Sobic005G186100 Sobic003G369100 Sobic003G369100 Sobic002G333400--Sobic003G369100 Sobic009G151600 Sobic009G151600 Sobic002G333400--Sobic009G151600 Sobic002G333400--Sobic002G140400 Sobic007G074000 Sobic007G074000 Sobic002G333400--Sobic007G074000 Sobic004G095600--Sobic002G373001 Sobic001G226800 Sobic001G226800 Sobic004G095600--Sobic001G226800 Sobic006G131600 Sobic006G131600 Sobic004G095600--Sobic006G131600 Sobic004G095600--Sobic002G034500 Sobic004G095600--Sobic003G102200 Sobic004G095600--Sobic002G092801 Sobic004G302200 Sobic004G302200 Sobic004G095600--Sobic004G302200 Sobic007G165701 Sobic007G165701 Sobic004G095600--Sobic007G165701 Sobic003G262100 Sobic003G262100 Sobic004G095600--Sobic003G262100
Octagon: transcription factors


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