Gene annotation
Transcriptome id Sobic.007G149300.1
Synonym Sb07g022340
Functional annotation expressed protein
UniProt C5YM34
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os08g35560.1 : expressed protein
MaizeGDB (Corn) Zm00025a005750
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G383700 OsCML27 - Calmodulin-related calcium sensor protein, expressed K13448: calcium-binding protein CML
2 Sobic.001G449700 highly upregulated during chilling in a chilling tolerant sorghum NSG(PubMedID : 29293808)@cytochrome P450, putative, expressed K01723: hydroperoxide dehydratase
3 Sobic.003G202200 uncharacterized protein PA4923, putative, expressed K06966: pyrimidine/purine-5'-nucleotide nucleosidase
4 Sobic.010G267600 similar to Putative senescence-associated protein(PubMedID : 29862293)@senescence-associated protein, putative, expressed -
5 Sobic.009G247900 similar to Putative late embryogenesis abundant protein(PubMedID : 29862293)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@late embryogenesis abundant protein, putative, expressed -
6 Sobic.004G191400 - -
7 Sobic.003G110200 NADP-dependent oxidoreductase, putative, expressed K07119: PTGR3, prostaglandin reductase 3
8 Sobic.001G481100 DUF581 domain containing protein, expressed -
9 Sobic.009G122400 expressed protein -
10 Sobic.003G428700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
11 Sobic.007G123300 C1-like domain containing protein, expressed -
12 Sobic.003G092900 expressed protein -
13 Sobic.003G093000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@expressed protein -
14 Sobic.002G395300 gibberellin receptor GID1L2, putative, expressed -
15 Sobic.001G055600 prenylated rab acceptor, putative, expressed -
16 Sobic.006G263600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
17 Sobic.004G341800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@thioredoxin family protein, putative, expressed -
18 Sobic.001G079300 helix-loop-helix DNA-binding domain containing protein, expressed -
19 Sobic.009G192600 Protein tyrosine/DOPA decarboxylase 1 (Os)(PubMedID : 27208977)@decarboxylase, putative, expressed K01592: tyrosine decarboxylase
20 Sobic.004G219800 MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant


Gene co-expression network
sample Sobic007G149300 Sobic007G149300 Sobic001G383700 Sobic001G383700 Sobic007G149300--Sobic001G383700 Sobic001G449700 Sobic001G449700 Sobic007G149300--Sobic001G449700 Sobic003G202200 Sobic003G202200 Sobic007G149300--Sobic003G202200 Sobic010G267600 Sobic010G267600 Sobic007G149300--Sobic010G267600 Sobic009G247900 Sobic009G247900 Sobic007G149300--Sobic009G247900 Sobic004G191400 Sobic004G191400 Sobic007G149300--Sobic004G191400 Sobic003G110200 Sobic003G110200 Sobic007G149300--Sobic003G110200 Sobic001G481100 Sobic001G481100 Sobic007G149300--Sobic001G481100 Sobic009G122400 Sobic009G122400 Sobic007G149300--Sobic009G122400 Sobic001G383700--Sobic003G202200 Sobic001G383700--Sobic009G247900 Sobic001G383700--Sobic001G449700 Sobic001G383700--Sobic007G149300 Sobic009G036000 Sobic009G036000 Sobic001G383700--Sobic009G036000 Sobic006G263600 Sobic006G263600 Sobic001G383700--Sobic006G263600 Sobic004G169200 Sobic004G169200 Sobic001G383700--Sobic004G169200 Sobic001G383700--Sobic004G191400 Sobic002G395300 Sobic002G395300 Sobic001G383700--Sobic002G395300 Sobic001G449700--Sobic001G383700 Sobic001G449700--Sobic003G202200 Sobic001G449700--Sobic003G110200 Sobic001G449700--Sobic007G149300 Sobic003G021500 Sobic003G021500 Sobic001G449700--Sobic003G021500 Sobic001G449700--Sobic009G036000 Sobic002G333400 Sobic002G333400 Sobic001G449700--Sobic002G333400 Sobic001G259700 Sobic001G259700 Sobic001G449700--Sobic001G259700 Sobic005G186100 Sobic005G186100 Sobic001G449700--Sobic005G186100 Sobic003G202200--Sobic001G481100 Sobic003G202200--Sobic009G247900 Sobic003G202200--Sobic001G383700 Sobic003G202200--Sobic001G449700 Sobic003G202200--Sobic003G021500 Sobic003G228900 Sobic003G228900 Sobic003G202200--Sobic003G228900 Sobic003G202200--Sobic004G191400 Sobic003G364600 Sobic003G364600 Sobic003G202200--Sobic003G364600 Sobic003G202200--Sobic009G036000 Sobic010G267600--Sobic003G202200 Sobic003G092900 Sobic003G092900 Sobic010G267600--Sobic003G092900 Sobic010G267600--Sobic007G149300 Sobic002G405600 Sobic002G405600 Sobic010G267600--Sobic002G405600 Sobic010G267600--Sobic001G383700 Sobic010G267600--Sobic009G247900 Sobic010G267600--Sobic001G449700 Sobic010G204600 Sobic010G204600 Sobic010G267600--Sobic010G204600 Sobic010G267600--Sobic001G259700 Sobic007G074000 Sobic007G074000 Sobic009G247900--Sobic007G074000 Sobic009G247900--Sobic003G202200 Sobic009G247900--Sobic001G383700 Sobic009G247900--Sobic003G228900 Sobic003G428700 Sobic003G428700 Sobic009G247900--Sobic003G428700 Sobic010G209200 Sobic010G209200 Sobic009G247900--Sobic010G209200 Sobic009G036100 Sobic009G036100 Sobic009G247900--Sobic009G036100 Sobic009G247900--Sobic009G036000 Sobic004G341800 Sobic004G341800 Sobic009G247900--Sobic004G341800 Sobic004G191300 Sobic004G191300 Sobic004G191400--Sobic004G191300 Sobic001G079300 Sobic001G079300 Sobic004G191400--Sobic001G079300 Sobic004G191400--Sobic009G122400 Sobic004G191400--Sobic010G209200 Sobic007G122800 Sobic007G122800 Sobic004G191400--Sobic007G122800 Sobic004G191400--Sobic003G228900 Sobic004G308900 Sobic004G308900 Sobic004G191400--Sobic004G308900 Sobic004G191400--Sobic003G428700 Sobic004G294400 Sobic004G294400 Sobic004G191400--Sobic004G294400 Sobic003G110200--Sobic001G449700 Sobic003G110200--Sobic003G202200 Sobic003G110200--Sobic007G149300 Sobic002G092801 Sobic002G092801 Sobic003G110200--Sobic002G092801 Sobic003G102200 Sobic003G102200 Sobic003G110200--Sobic003G102200 Sobic003G110200--Sobic001G383700 Sobic003G110200--Sobic001G481100 Sobic003G110200--Sobic003G021500 Sobic003G110200--Sobic005G186100 Sobic001G481100--Sobic003G228900 Sobic006G075400 Sobic006G075400 Sobic001G481100--Sobic006G075400 Sobic001G318700 Sobic001G318700 Sobic001G481100--Sobic001G318700 Sobic001G481100--Sobic007G074000 Sobic001G256700 Sobic001G256700 Sobic001G481100--Sobic001G256700 Sobic001G481100--Sobic003G202200 Sobic001G481100--Sobic001G079300 Sobic004G301000 Sobic004G301000 Sobic001G481100--Sobic004G301000 Sobic002G251000 Sobic002G251000 Sobic001G481100--Sobic002G251000 Sobic009G122400--Sobic004G191400 Sobic009G122400--Sobic010G209200 Sobic009G122400--Sobic004G191300 Sobic009G122400--Sobic003G428700 Sobic009G122400--Sobic003G228900 Sobic009G122400--Sobic001G079300 Sobic001G330400 Sobic001G330400 Sobic009G122400--Sobic001G330400 Sobic009G122400--Sobic001G256700 Sobic002G388900 Sobic002G388900 Sobic009G122400--Sobic002G388900
Octagon: transcription factors


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