Gene annotation
Transcriptome id Sobic.003G162700.2
Synonym
Functional annotation expressed protein
UniProt A0A1W0VXH1
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) ChrUn.fgenesh.mRNA.68 : expressed protein
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G067601 - K17553: protein phosphatase 1 regulatory subunit 11
2 Sobic.009G070400 expressed protein -
3 Sobic.002G333400 KI domain interacting kinase 1, putative, expressed -
4 Sobic.006G158600 short-chain dehydrogenase/reductase, putative, expressed K15095: (+)-neomenthol dehydrogenase
5 Sobic.003G334600 NAC domain transcription factor, putative, expressed -
6 Sobic.010G238600 transferase family protein, putative, expressed -
7 Sobic.010G274900 serine/threonine-protein kinase Cx32, chloroplast precursor, putative, expressed -
8 Sobic.007G025500 amino acid transporter, putative, expressed -
9 Sobic.008G136400 expressed protein -
10 Sobic.004G177700 AIG1, putative, expressed -
11 Sobic.003G364600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@glycosyl hydrolases family 17, putative, expressed -
12 Sobic.009G023200 glycine-rich protein A3, putative, expressed -
13 Sobic.002G070200 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@LTPL84 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
14 Sobic.003G021500 sodium/calcium exchanger protein, putative, expressed -
15 Sobic.002G312400 domain of unknown function domain containing protein, expressed -
16 Sobic.009G221400 B3 DNA binding domain containing protein, expressed K09287: RAV-like factor
17 Sobic.001G339801 - -
18 Sobic.001G019900 zinc finger, C3HC4 type domain containing protein, expressed K15707: RING finger protein 170
19 Sobic.007G187800 mtN19, putative, expressed -
20 Sobic.003G078100 B3 DNA binding domain containing protein, expressed -


Gene co-expression network
sample Sobic003G162700 Sobic003G162700 Sobic001G067601 Sobic001G067601 Sobic003G162700--Sobic001G067601 Sobic009G070400 Sobic009G070400 Sobic003G162700--Sobic009G070400 Sobic002G333400 Sobic002G333400 Sobic003G162700--Sobic002G333400 Sobic006G158600 Sobic006G158600 Sobic003G162700--Sobic006G158600 Sobic003G334600 Sobic003G334600 Sobic003G162700--Sobic003G334600 Sobic010G238600 Sobic010G238600 Sobic003G162700--Sobic010G238600 Sobic010G274900 Sobic010G274900 Sobic003G162700--Sobic010G274900 Sobic007G025500 Sobic007G025500 Sobic003G162700--Sobic007G025500 Sobic008G136400 Sobic008G136400 Sobic003G162700--Sobic008G136400 Sobic001G019900 Sobic001G019900 Sobic001G067601--Sobic001G019900 Sobic009G023200 Sobic009G023200 Sobic001G067601--Sobic009G023200 Sobic002G046100 Sobic002G046100 Sobic001G067601--Sobic002G046100 Sobic010G217900 Sobic010G217900 Sobic001G067601--Sobic010G217900 Sobic003G063200 Sobic003G063200 Sobic001G067601--Sobic003G063200 Sobic001G037000 Sobic001G037000 Sobic001G067601--Sobic001G037000 Sobic005G228000 Sobic005G228000 Sobic001G067601--Sobic005G228000 Sobic003G181500 Sobic003G181500 Sobic001G067601--Sobic003G181500 Sobic001G067601--Sobic003G162700 Sobic010G176600 Sobic010G176600 Sobic009G070400--Sobic010G176600 Sobic001G423800 Sobic001G423800 Sobic009G070400--Sobic001G423800 Sobic002G393000 Sobic002G393000 Sobic009G070400--Sobic002G393000 Sobic009G070400--Sobic008G136400 Sobic004G301000 Sobic004G301000 Sobic009G070400--Sobic004G301000 Sobic009G070400--Sobic006G158600 Sobic003G286600 Sobic003G286600 Sobic009G070400--Sobic003G286600 Sobic002G140400 Sobic002G140400 Sobic009G070400--Sobic002G140400 Sobic001G038900 Sobic001G038900 Sobic009G070400--Sobic001G038900 Sobic001G407800 Sobic001G407800 Sobic002G333400--Sobic001G407800 Sobic002G333400--Sobic006G158600 Sobic006G056400 Sobic006G056400 Sobic002G333400--Sobic006G056400 Sobic002G333400--Sobic008G136400 Sobic005G186100 Sobic005G186100 Sobic002G333400--Sobic005G186100 Sobic003G369100 Sobic003G369100 Sobic002G333400--Sobic003G369100 Sobic009G151600 Sobic009G151600 Sobic002G333400--Sobic009G151600 Sobic002G333400--Sobic002G140400 Sobic007G074000 Sobic007G074000 Sobic002G333400--Sobic007G074000 Sobic006G158600--Sobic008G136400 Sobic002G192000 Sobic002G192000 Sobic006G158600--Sobic002G192000 Sobic006G158600--Sobic002G140400 Sobic006G158600--Sobic002G333400 Sobic006G158600--Sobic006G056400 Sobic006G158600--Sobic001G038900 Sobic006G158600--Sobic001G423800 Sobic002G336600 Sobic002G336600 Sobic006G158600--Sobic002G336600 Sobic004G243100 Sobic004G243100 Sobic006G158600--Sobic004G243100 Sobic003G334600--Sobic003G369100 Sobic003G334600--Sobic001G038900 Sobic003G334600--Sobic008G136400 Sobic003G334600--Sobic002G140400 Sobic008G050600 Sobic008G050600 Sobic003G334600--Sobic008G050600 Sobic001G308300 Sobic001G308300 Sobic003G334600--Sobic001G308300 Sobic003G334600--Sobic007G074000 Sobic003G387000 Sobic003G387000 Sobic003G334600--Sobic003G387000 Sobic003G345100 Sobic003G345100 Sobic003G334600--Sobic003G345100 Sobic003G430400 Sobic003G430400 Sobic010G238600--Sobic003G430400 Sobic010G238600--Sobic002G140400 Sobic010G238600--Sobic003G334600 Sobic001G015100 Sobic001G015100 Sobic010G238600--Sobic001G015100 Sobic003G364600 Sobic003G364600 Sobic010G238600--Sobic003G364600 Sobic007G155200 Sobic007G155200 Sobic010G238600--Sobic007G155200 Sobic009G036000 Sobic009G036000 Sobic010G238600--Sobic009G036000 Sobic010G238600--Sobic002G333400 Sobic010G238600--Sobic006G056400 Sobic001G477600 Sobic001G477600 Sobic010G274900--Sobic001G477600 Sobic003G367200 Sobic003G367200 Sobic010G274900--Sobic003G367200 Sobic003G350300 Sobic003G350300 Sobic010G274900--Sobic003G350300 Sobic010G274900--Sobic008G136400 Sobic010G166500 Sobic010G166500 Sobic010G274900--Sobic010G166500 Sobic006G275200 Sobic006G275200 Sobic010G274900--Sobic006G275200 Sobic009G008900 Sobic009G008900 Sobic010G274900--Sobic009G008900 Sobic007G015600 Sobic007G015600 Sobic010G274900--Sobic007G015600 Sobic003G357300 Sobic003G357300 Sobic010G274900--Sobic003G357300 Sobic002G034800 Sobic002G034800 Sobic007G025500--Sobic002G034800 Sobic001G119400 Sobic001G119400 Sobic007G025500--Sobic001G119400 Sobic003G297600 Sobic003G297600 Sobic007G025500--Sobic003G297600 Sobic002G366600 Sobic002G366600 Sobic007G025500--Sobic002G366600 Sobic009G139400 Sobic009G139400 Sobic007G025500--Sobic009G139400 Sobic010G066700 Sobic010G066700 Sobic007G025500--Sobic010G066700 Sobic009G183400 Sobic009G183400 Sobic007G025500--Sobic009G183400 Sobic009G077800 Sobic009G077800 Sobic007G025500--Sobic009G077800 Sobic010G136000 Sobic010G136000 Sobic007G025500--Sobic010G136000 Sobic008G136400--Sobic001G038900 Sobic008G136400--Sobic008G050600 Sobic008G136400--Sobic002G140400 Sobic008G136400--Sobic006G275200 Sobic001G140900 Sobic001G140900 Sobic008G136400--Sobic001G140900 Sobic008G136400--Sobic006G158600 Sobic004G189400 Sobic004G189400 Sobic008G136400--Sobic004G189400 Sobic008G136400--Sobic001G423800 Sobic008G136400--Sobic009G008900
Octagon: transcription factors


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