Gene annotation
Transcriptome id Sobic.009G070400.1
Synonym Sb09g005910
Functional annotation expressed protein
UniProt C5YUB1
Pfam -
Panther DB PTHR12626 PTHR12626:SF5
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os05g09580.1 : expressed protein
MaizeGDB (Corn) Zm00025a043084
Brachypodium KQK07143
Barley HORVU6Hr1G006840.2 , HORVU6Hr1G006840.3 , HORVU6Hr1G006840.1 , HORVU6Hr1G083600.2 , HORVU6Hr1G083600.1
Wheat -
Populus -


JBrowse

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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G176600 - -
2 Sobic.001G423800 DNA binding protein, putative, expressed -
3 Sobic.002G393000 pyrrolidone-carboxylate peptidase, putative, expressed K01304: pyroglutamyl-peptidase
4 Sobic.008G136400 expressed protein -
5 Sobic.004G301000 B-box (BBX) protein(PubMedID : 30626335)@B-box zinc finger family protein, putative, expressed -
6 Sobic.006G158600 short-chain dehydrogenase/reductase, putative, expressed K15095: (+)-neomenthol dehydrogenase
7 Sobic.003G286600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@sphingolipid C4-hydroxylase SUR2, putative, expressed K04713: sphinganine C4-monooxygenase
8 Sobic.002G140400 plastocyanin-like domain containing protein, putative, expressed -
9 Sobic.001G038900 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@DUF567 domain containing protein, putative, expressed -
10 Sobic.009G234100 WRKY49, expressed -
11 Sobic.001G308300 expressed protein -
12 Sobic.003G364600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@glycosyl hydrolases family 17, putative, expressed -
13 Sobic.003G357300 MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
14 Sobic.008G050600 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@Not investigated(PubMedID : 23766026)@ethylene-responsive transcription factor ERF110, putative, expressed -
15 Sobic.009G221400 B3 DNA binding domain containing protein, expressed K09287: RAV-like factor
16 Sobic.003G078100 B3 DNA binding domain containing protein, expressed -
17 Sobic.003G334600 NAC domain transcription factor, putative, expressed -
18 Sobic.003G041200 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@expressed protein -
19 Sobic.002G353900 "Belonging to the Sdw3 locus, Sbi_sdw3"(PubMedID : 20464438)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@transporter family protein, putative, expressed -
20 Sobic.001G477600 zinc finger protein, putative, expressed -


Gene co-expression network
sample Sobic009G070400 Sobic009G070400 Sobic010G176600 Sobic010G176600 Sobic009G070400--Sobic010G176600 Sobic001G423800 Sobic001G423800 Sobic009G070400--Sobic001G423800 Sobic002G393000 Sobic002G393000 Sobic009G070400--Sobic002G393000 Sobic008G136400 Sobic008G136400 Sobic009G070400--Sobic008G136400 Sobic004G301000 Sobic004G301000 Sobic009G070400--Sobic004G301000 Sobic006G158600 Sobic006G158600 Sobic009G070400--Sobic006G158600 Sobic003G286600 Sobic003G286600 Sobic009G070400--Sobic003G286600 Sobic002G140400 Sobic002G140400 Sobic009G070400--Sobic002G140400 Sobic001G038900 Sobic001G038900 Sobic009G070400--Sobic001G038900 Sobic010G176600--Sobic003G286600 Sobic005G063100 Sobic005G063100 Sobic010G176600--Sobic005G063100 Sobic010G176600--Sobic002G140400 Sobic008G050600 Sobic008G050600 Sobic010G176600--Sobic008G050600 Sobic010G176600--Sobic001G423800 Sobic009G234100 Sobic009G234100 Sobic010G176600--Sobic009G234100 Sobic010G084700 Sobic010G084700 Sobic010G176600--Sobic010G084700 Sobic003G116800 Sobic003G116800 Sobic010G176600--Sobic003G116800 Sobic004G189400 Sobic004G189400 Sobic010G176600--Sobic004G189400 Sobic004G243100 Sobic004G243100 Sobic001G423800--Sobic004G243100 Sobic001G423800--Sobic002G140400 Sobic001G423800--Sobic001G038900 Sobic001G119400 Sobic001G119400 Sobic001G423800--Sobic001G119400 Sobic001G018300 Sobic001G018300 Sobic001G423800--Sobic001G018300 Sobic007G155100 Sobic007G155100 Sobic001G423800--Sobic007G155100 Sobic001G423800--Sobic008G136400 Sobic001G423800--Sobic002G393000 Sobic001G423800--Sobic004G189400 Sobic002G393000--Sobic001G119400 Sobic006G275200 Sobic006G275200 Sobic002G393000--Sobic006G275200 Sobic006G173900 Sobic006G173900 Sobic002G393000--Sobic006G173900 Sobic002G393000--Sobic001G423800 Sobic009G008900 Sobic009G008900 Sobic002G393000--Sobic009G008900 Sobic002G393000--Sobic008G136400 Sobic010G099900 Sobic010G099900 Sobic002G393000--Sobic010G099900 Sobic002G414600 Sobic002G414600 Sobic002G393000--Sobic002G414600 Sobic009G183400 Sobic009G183400 Sobic002G393000--Sobic009G183400 Sobic008G136400--Sobic001G038900 Sobic008G136400--Sobic008G050600 Sobic008G136400--Sobic002G140400 Sobic008G136400--Sobic006G275200 Sobic001G140900 Sobic001G140900 Sobic008G136400--Sobic001G140900 Sobic008G136400--Sobic006G158600 Sobic008G136400--Sobic004G189400 Sobic008G136400--Sobic001G423800 Sobic008G136400--Sobic009G008900 Sobic004G100700 Sobic004G100700 Sobic004G301000--Sobic004G100700 Sobic001G108200 Sobic001G108200 Sobic004G301000--Sobic001G108200 Sobic001G481100 Sobic001G481100 Sobic004G301000--Sobic001G481100 Sobic004G301000--Sobic001G423800 Sobic002G188900 Sobic002G188900 Sobic004G301000--Sobic002G188900 Sobic004G141200 Sobic004G141200 Sobic004G301000--Sobic004G141200 Sobic005G011300 Sobic005G011300 Sobic004G301000--Sobic005G011300 Sobic005G099000 Sobic005G099000 Sobic004G301000--Sobic005G099000 Sobic002G251000 Sobic002G251000 Sobic004G301000--Sobic002G251000 Sobic006G158600--Sobic008G136400 Sobic002G192000 Sobic002G192000 Sobic006G158600--Sobic002G192000 Sobic006G158600--Sobic002G140400 Sobic002G333400 Sobic002G333400 Sobic006G158600--Sobic002G333400 Sobic006G056400 Sobic006G056400 Sobic006G158600--Sobic006G056400 Sobic006G158600--Sobic001G038900 Sobic006G158600--Sobic001G423800 Sobic002G336600 Sobic002G336600 Sobic006G158600--Sobic002G336600 Sobic006G158600--Sobic004G243100 Sobic003G286600--Sobic010G176600 Sobic003G286600--Sobic008G050600 Sobic003G286600--Sobic005G063100 Sobic006G099900 Sobic006G099900 Sobic003G286600--Sobic006G099900 Sobic004G208700 Sobic004G208700 Sobic003G286600--Sobic004G208700 Sobic003G286600--Sobic002G140400 Sobic003G345100 Sobic003G345100 Sobic003G286600--Sobic003G345100 Sobic003G317100 Sobic003G317100 Sobic003G286600--Sobic003G317100 Sobic009G164600 Sobic009G164600 Sobic003G286600--Sobic009G164600 Sobic002G140400--Sobic001G038900 Sobic002G263400 Sobic002G263400 Sobic002G140400--Sobic002G263400 Sobic002G140400--Sobic004G189400 Sobic002G140400--Sobic001G423800 Sobic002G140400--Sobic008G136400 Sobic007G074000 Sobic007G074000 Sobic002G140400--Sobic007G074000 Sobic004G237800 Sobic004G237800 Sobic002G140400--Sobic004G237800 Sobic002G140400--Sobic008G050600 Sobic002G140400--Sobic003G286600 Sobic001G038900--Sobic002G140400 Sobic001G038900--Sobic001G140900 Sobic001G038900--Sobic008G136400 Sobic001G038900--Sobic008G050600 Sobic001G038900--Sobic001G423800 Sobic009G159400 Sobic009G159400 Sobic001G038900--Sobic009G159400 Sobic001G038900--Sobic003G345100 Sobic001G367600 Sobic001G367600 Sobic001G038900--Sobic001G367600 Sobic001G038900--Sobic004G189400
Octagon: transcription factors


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