Gene annotation
Transcriptome id Sobic.007G187800.1
Synonym Sb07g025770
Functional annotation mtN19, putative, expressed
UniProt C5YHM3
Pfam PF07712
Panther DB PTHR33390 PTHR33390:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G61820 : -
RAP-DB (Rice) LOC_Os08g42590.1 : mtN19, putative, expressed
MaizeGDB (Corn) Zm00025a005324
Brachypodium -
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.007G187800


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G078100 B3 DNA binding domain containing protein, expressed -
2 Sobic.009G008900 cytochrome b5-like Heme/Steroid binding domain containing protein, expressed -
3 Sobic.007G025500 amino acid transporter, putative, expressed -
4 Sobic.008G136400 expressed protein -
5 Sobic.006G158600 short-chain dehydrogenase/reductase, putative, expressed K15095: (+)-neomenthol dehydrogenase
6 Sobic.006G173900 glutathione peroxidase, putative, expressed K00432: gpx, btuE, glutathione peroxidase
7 Sobic.009G183400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@glycosyl hydrolases family 17, putative, expressed -
8 Sobic.001G119400 microsomal glutathione S-transferase 3, putative, expressed K00799: GST, glutathione S-transferase
9 Sobic.002G414600 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@hypoxia-responsive family protein, putative, expressed -
10 Sobic.010G099900 expressed protein -
11 Sobic.001G038900 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@DUF567 domain containing protein, putative, expressed -
12 Sobic.001G476500 helix-loop-helix DNA-binding protein, putative, expressed -
13 Sobic.001G423800 DNA binding protein, putative, expressed -
14 Sobic.002G393000 pyrrolidone-carboxylate peptidase, putative, expressed K01304: pyroglutamyl-peptidase
15 Sobic.006G092500 expressed protein -
16 Sobic.009G061200 universal stress protein domain containing protein, putative, expressed -
17 Sobic.003G286600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@sphingolipid C4-hydroxylase SUR2, putative, expressed K04713: sphinganine C4-monooxygenase
18 Sobic.009G068600 transferase family protein, putative, expressed -
19 Sobic.001G252300 pectinesterase, putative, expressed K01051: pectinesterase
20 Sobic.006G275200 CHCH domain containing protein, expressed -


Gene co-expression network
sample Sobic007G187800 Sobic007G187800 Sobic003G078100 Sobic003G078100 Sobic007G187800--Sobic003G078100 Sobic009G008900 Sobic009G008900 Sobic007G187800--Sobic009G008900 Sobic007G025500 Sobic007G025500 Sobic007G187800--Sobic007G025500 Sobic008G136400 Sobic008G136400 Sobic007G187800--Sobic008G136400 Sobic006G158600 Sobic006G158600 Sobic007G187800--Sobic006G158600 Sobic006G173900 Sobic006G173900 Sobic007G187800--Sobic006G173900 Sobic009G183400 Sobic009G183400 Sobic007G187800--Sobic009G183400 Sobic001G119400 Sobic001G119400 Sobic007G187800--Sobic001G119400 Sobic002G414600 Sobic002G414600 Sobic007G187800--Sobic002G414600 Sobic003G078100--Sobic009G008900 Sobic002G393000 Sobic002G393000 Sobic003G078100--Sobic002G393000 Sobic003G078100--Sobic006G158600 Sobic001G387900 Sobic001G387900 Sobic003G078100--Sobic001G387900 Sobic001G423800 Sobic001G423800 Sobic003G078100--Sobic001G423800 Sobic006G275200 Sobic006G275200 Sobic003G078100--Sobic006G275200 Sobic007G057000 Sobic007G057000 Sobic003G078100--Sobic007G057000 Sobic003G078100--Sobic001G119400 Sobic002G361100 Sobic002G361100 Sobic003G078100--Sobic002G361100 Sobic009G008900--Sobic006G173900 Sobic009G008900--Sobic001G119400 Sobic009G008900--Sobic006G275200 Sobic009G008900--Sobic002G393000 Sobic009G008900--Sobic008G136400 Sobic009G008900--Sobic001G423800 Sobic001G177800 Sobic001G177800 Sobic009G008900--Sobic001G177800 Sobic009G008900--Sobic002G414600 Sobic001G038900 Sobic001G038900 Sobic009G008900--Sobic001G038900 Sobic002G034800 Sobic002G034800 Sobic007G025500--Sobic002G034800 Sobic007G025500--Sobic001G119400 Sobic003G297600 Sobic003G297600 Sobic007G025500--Sobic003G297600 Sobic002G366600 Sobic002G366600 Sobic007G025500--Sobic002G366600 Sobic009G139400 Sobic009G139400 Sobic007G025500--Sobic009G139400 Sobic010G066700 Sobic010G066700 Sobic007G025500--Sobic010G066700 Sobic007G025500--Sobic009G183400 Sobic009G077800 Sobic009G077800 Sobic007G025500--Sobic009G077800 Sobic010G136000 Sobic010G136000 Sobic007G025500--Sobic010G136000 Sobic008G136400--Sobic001G038900 Sobic008G050600 Sobic008G050600 Sobic008G136400--Sobic008G050600 Sobic002G140400 Sobic002G140400 Sobic008G136400--Sobic002G140400 Sobic008G136400--Sobic006G275200 Sobic001G140900 Sobic001G140900 Sobic008G136400--Sobic001G140900 Sobic008G136400--Sobic006G158600 Sobic004G189400 Sobic004G189400 Sobic008G136400--Sobic004G189400 Sobic008G136400--Sobic001G423800 Sobic008G136400--Sobic009G008900 Sobic006G158600--Sobic008G136400 Sobic002G192000 Sobic002G192000 Sobic006G158600--Sobic002G192000 Sobic006G158600--Sobic002G140400 Sobic002G333400 Sobic002G333400 Sobic006G158600--Sobic002G333400 Sobic006G056400 Sobic006G056400 Sobic006G158600--Sobic006G056400 Sobic006G158600--Sobic001G038900 Sobic006G158600--Sobic001G423800 Sobic002G336600 Sobic002G336600 Sobic006G158600--Sobic002G336600 Sobic004G243100 Sobic004G243100 Sobic006G158600--Sobic004G243100 Sobic006G173900--Sobic009G008900 Sobic010G099900 Sobic010G099900 Sobic006G173900--Sobic010G099900 Sobic006G173900--Sobic002G393000 Sobic006G173900--Sobic006G275200 Sobic006G173900--Sobic008G136400 Sobic006G173900--Sobic002G414600 Sobic006G173900--Sobic001G119400 Sobic006G173900--Sobic001G423800 Sobic004G177700 Sobic004G177700 Sobic006G173900--Sobic004G177700 Sobic001G476500 Sobic001G476500 Sobic009G183400--Sobic001G476500 Sobic009G183400--Sobic001G119400 Sobic006G092500 Sobic006G092500 Sobic009G183400--Sobic006G092500 Sobic009G183400--Sobic001G038900 Sobic001G097600 Sobic001G097600 Sobic009G183400--Sobic001G097600 Sobic009G061200 Sobic009G061200 Sobic009G183400--Sobic009G061200 Sobic009G183400--Sobic002G414600 Sobic004G100700 Sobic004G100700 Sobic009G183400--Sobic004G100700 Sobic009G183400--Sobic001G140900 Sobic001G119400--Sobic009G183400 Sobic001G119400--Sobic001G423800 Sobic001G119400--Sobic002G393000 Sobic001G119400--Sobic009G008900 Sobic001G119400--Sobic009G139400 Sobic001G119400--Sobic001G038900 Sobic001G119400--Sobic006G275200 Sobic006G099900 Sobic006G099900 Sobic001G119400--Sobic006G099900 Sobic003G417800 Sobic003G417800 Sobic001G119400--Sobic003G417800 Sobic001G252300 Sobic001G252300 Sobic002G414600--Sobic001G252300 Sobic002G414600--Sobic009G183400 Sobic002G414600--Sobic001G097600 Sobic002G414600--Sobic002G393000 Sobic002G414600--Sobic001G119400 Sobic002G414600--Sobic009G008900 Sobic005G051200 Sobic005G051200 Sobic002G414600--Sobic005G051200 Sobic002G414600--Sobic006G173900 Sobic002G414600--Sobic006G275200
Octagon: transcription factors


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