Gene annotation
Transcriptome id Sobic.010G099900.1
Synonym Sb10g008690
Functional annotation expressed protein
UniProt C5Z7J4
Pfam -
Panther DB PTHR36704
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G05060 : -
RAP-DB (Rice) LOC_Os06g13220.1 : expressed protein
MaizeGDB (Corn) Zm00025a042645
Brachypodium -
Barley HORVU7Hr1G040150.3 , HORVU7Hr1G040150.2 , HORVU7Hr1G040150.1 , HORVU7Hr1G040120.3 , HORVU7Hr1G040120.1 , HORVU7Hr1G040120.2
Wheat TraesCS7D02G197900 , TraesCS7A02G196400 , TraesCS7B02G102400 , TraesCS7B02G102400 , TraesCS7B02G102100
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G173900 glutathione peroxidase, putative, expressed K00432: gpx, btuE, glutathione peroxidase
2 Sobic.002G393000 pyrrolidone-carboxylate peptidase, putative, expressed K01304: pyroglutamyl-peptidase
3 Sobic.006G275200 CHCH domain containing protein, expressed -
4 Sobic.009G008900 cytochrome b5-like Heme/Steroid binding domain containing protein, expressed -
5 Sobic.001G119400 microsomal glutathione S-transferase 3, putative, expressed K00799: GST, glutathione S-transferase
6 Sobic.006G127900 helix-loop-helix DNA-binding domain containing protein, expressed -
7 Sobic.008G136400 expressed protein -
8 Sobic.002G414600 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@hypoxia-responsive family protein, putative, expressed -
9 Sobic.004G216600 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@OsGrx_C2.1 - glutaredoxin subgroup I, expressed K03676: grxC, GLRX, glutaredoxin 3
10 Sobic.004G177700 AIG1, putative, expressed -
11 Sobic.009G183400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@glycosyl hydrolases family 17, putative, expressed -
12 Sobic.001G190200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@transporter family protein, putative, expressed -
13 Sobic.001G319600 Relative abundance under control condition and upregulated in cold susceptible sorghum under cold stress(PubMedID : 26645959)@glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
14 Sobic.001G423800 DNA binding protein, putative, expressed -
15 Sobic.001G177800 ribosomal protein, putative, expressed K02866: RP-L10e, large subunit ribosomal protein L10e
16 Sobic.002G261000 expressed protein -
17 Sobic.009G061200 universal stress protein domain containing protein, putative, expressed -
18 Sobic.001G317200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
19 Sobic.006G092500 expressed protein -
20 Sobic.001G476500 helix-loop-helix DNA-binding protein, putative, expressed -


Gene co-expression network
sample Sobic010G099900 Sobic010G099900 Sobic006G173900 Sobic006G173900 Sobic010G099900--Sobic006G173900 Sobic002G393000 Sobic002G393000 Sobic010G099900--Sobic002G393000 Sobic006G275200 Sobic006G275200 Sobic010G099900--Sobic006G275200 Sobic009G008900 Sobic009G008900 Sobic010G099900--Sobic009G008900 Sobic001G119400 Sobic001G119400 Sobic010G099900--Sobic001G119400 Sobic006G127900 Sobic006G127900 Sobic010G099900--Sobic006G127900 Sobic008G136400 Sobic008G136400 Sobic010G099900--Sobic008G136400 Sobic002G414600 Sobic002G414600 Sobic010G099900--Sobic002G414600 Sobic004G216600 Sobic004G216600 Sobic010G099900--Sobic004G216600 Sobic006G173900--Sobic009G008900 Sobic006G173900--Sobic010G099900 Sobic006G173900--Sobic002G393000 Sobic006G173900--Sobic006G275200 Sobic006G173900--Sobic008G136400 Sobic006G173900--Sobic002G414600 Sobic006G173900--Sobic001G119400 Sobic001G423800 Sobic001G423800 Sobic006G173900--Sobic001G423800 Sobic004G177700 Sobic004G177700 Sobic006G173900--Sobic004G177700 Sobic002G393000--Sobic001G119400 Sobic002G393000--Sobic006G275200 Sobic002G393000--Sobic006G173900 Sobic002G393000--Sobic001G423800 Sobic002G393000--Sobic009G008900 Sobic002G393000--Sobic008G136400 Sobic002G393000--Sobic010G099900 Sobic002G393000--Sobic002G414600 Sobic009G183400 Sobic009G183400 Sobic002G393000--Sobic009G183400 Sobic006G275200--Sobic008G136400 Sobic006G275200--Sobic002G393000 Sobic006G275200--Sobic009G008900 Sobic006G275200--Sobic006G173900 Sobic001G097600 Sobic001G097600 Sobic006G275200--Sobic001G097600 Sobic006G275200--Sobic001G119400 Sobic003G367200 Sobic003G367200 Sobic006G275200--Sobic003G367200 Sobic001G317000 Sobic001G317000 Sobic006G275200--Sobic001G317000 Sobic001G038900 Sobic001G038900 Sobic006G275200--Sobic001G038900 Sobic009G008900--Sobic006G173900 Sobic009G008900--Sobic001G119400 Sobic009G008900--Sobic006G275200 Sobic009G008900--Sobic002G393000 Sobic009G008900--Sobic008G136400 Sobic009G008900--Sobic001G423800 Sobic001G177800 Sobic001G177800 Sobic009G008900--Sobic001G177800 Sobic009G008900--Sobic002G414600 Sobic009G008900--Sobic001G038900 Sobic001G119400--Sobic009G183400 Sobic001G119400--Sobic001G423800 Sobic001G119400--Sobic002G393000 Sobic001G119400--Sobic009G008900 Sobic009G139400 Sobic009G139400 Sobic001G119400--Sobic009G139400 Sobic001G119400--Sobic001G038900 Sobic001G119400--Sobic006G275200 Sobic006G099900 Sobic006G099900 Sobic001G119400--Sobic006G099900 Sobic003G417800 Sobic003G417800 Sobic001G119400--Sobic003G417800 Sobic006G127900--Sobic010G099900 Sobic006G127900--Sobic009G008900 Sobic009G032800 Sobic009G032800 Sobic006G127900--Sobic009G032800 Sobic003G078100 Sobic003G078100 Sobic006G127900--Sobic003G078100 Sobic003G086600 Sobic003G086600 Sobic006G127900--Sobic003G086600 Sobic006G127900--Sobic006G275200 Sobic006G092500 Sobic006G092500 Sobic006G127900--Sobic006G092500 Sobic001G476500 Sobic001G476500 Sobic006G127900--Sobic001G476500 Sobic006G127900--Sobic006G173900 Sobic008G136400--Sobic001G038900 Sobic008G050600 Sobic008G050600 Sobic008G136400--Sobic008G050600 Sobic002G140400 Sobic002G140400 Sobic008G136400--Sobic002G140400 Sobic008G136400--Sobic006G275200 Sobic001G140900 Sobic001G140900 Sobic008G136400--Sobic001G140900 Sobic006G158600 Sobic006G158600 Sobic008G136400--Sobic006G158600 Sobic004G189400 Sobic004G189400 Sobic008G136400--Sobic004G189400 Sobic008G136400--Sobic001G423800 Sobic008G136400--Sobic009G008900 Sobic001G252300 Sobic001G252300 Sobic002G414600--Sobic001G252300 Sobic002G414600--Sobic009G183400 Sobic002G414600--Sobic001G097600 Sobic002G414600--Sobic002G393000 Sobic002G414600--Sobic001G119400 Sobic002G414600--Sobic009G008900 Sobic005G051200 Sobic005G051200 Sobic002G414600--Sobic005G051200 Sobic002G414600--Sobic006G173900 Sobic002G414600--Sobic006G275200 Sobic009G061200 Sobic009G061200 Sobic004G216600--Sobic009G061200 Sobic004G216600--Sobic001G119400 Sobic001G319600 Sobic001G319600 Sobic004G216600--Sobic001G319600 Sobic001G317200 Sobic001G317200 Sobic004G216600--Sobic001G317200 Sobic004G216600--Sobic009G183400 Sobic004G216600--Sobic002G393000 Sobic004G221500 Sobic004G221500 Sobic004G216600--Sobic004G221500 Sobic004G216600--Sobic001G423800 Sobic001G348700 Sobic001G348700 Sobic004G216600--Sobic001G348700
Octagon: transcription factors


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