Gene annotation
Transcriptome id Sobic.004G177700.1
Synonym Sb04g022760
Functional annotation AIG1, putative, expressed
UniProt C5XUT5
Pfam PF01926
Panther DB PTHR10903 PTHR10903:SF66
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005525; GTP binding


Orthologs (automatic annotation)
TAIR AT1G33970 : P-loop containing nucleoside triphosphate hydrolases superfamily protein
RAP-DB (Rice) LOC_Os02g35130.2 : AIG1, putative, expressed
MaizeGDB (Corn) Zm00025a020687 , Zm00025a031611
Brachypodium KQJ99894
Barley HORVU2Hr1G019360.1
Wheat TraesCS2B02G130900 , TraesCS2D02G112700 , TraesCS2A02G112300
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G173900 glutathione peroxidase, putative, expressed K00432: gpx, btuE, glutathione peroxidase
2 Sobic.002G393000 pyrrolidone-carboxylate peptidase, putative, expressed K01304: pyroglutamyl-peptidase
3 Sobic.006G275200 CHCH domain containing protein, expressed -
4 Sobic.010G099900 expressed protein -
5 Sobic.009G008900 cytochrome b5-like Heme/Steroid binding domain containing protein, expressed -
6 Sobic.010G086200 GRAM domain containing protein, expressed -
7 Sobic.010G149300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@ubiquitin-conjugating enzyme, putative, expressed K06689: UBE2D, UBC4, ubiquitin-conjugating enzyme E2 D
8 Sobic.006G230500 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@expressed protein -
9 Sobic.002G414600 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@hypoxia-responsive family protein, putative, expressed -
10 Sobic.008G136400 expressed protein -
11 Sobic.002G211900 zinc finger, C3HC4 type domain containing protein, expressed K16274: E3 ubiquitin-protein ligase AIP2
12 Sobic.009G143400 chitin-inducible gibberellin-responsive protein, putative, expressed -
13 Sobic.001G477300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@GRAM domain containing protein, expressed -
14 Sobic.002G046100 zinc finger A20 and AN1 domain-containing stress-associated protein, putative, expressed -
15 Sobic.003G350300 ubiquitin-conjugating enzyme, putative, expressed K10575: UBE2G1, ubiquitin-conjugating enzyme E2 G1
16 Sobic.002G267500 hydrolase, alpha/beta fold family domain containing protein, expressed -
17 Sobic.001G281400 expressed protein -
18 Sobic.007G015600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@- -
19 Sobic.001G308300 expressed protein -
20 Sobic.002G312400 domain of unknown function domain containing protein, expressed -


Gene co-expression network
sample Sobic004G177700 Sobic004G177700 Sobic006G173900 Sobic006G173900 Sobic004G177700--Sobic006G173900 Sobic002G393000 Sobic002G393000 Sobic004G177700--Sobic002G393000 Sobic006G275200 Sobic006G275200 Sobic004G177700--Sobic006G275200 Sobic010G099900 Sobic010G099900 Sobic004G177700--Sobic010G099900 Sobic009G008900 Sobic009G008900 Sobic004G177700--Sobic009G008900 Sobic010G086200 Sobic010G086200 Sobic004G177700--Sobic010G086200 Sobic010G149300 Sobic010G149300 Sobic004G177700--Sobic010G149300 Sobic006G230500 Sobic006G230500 Sobic004G177700--Sobic006G230500 Sobic002G414600 Sobic002G414600 Sobic004G177700--Sobic002G414600 Sobic006G173900--Sobic009G008900 Sobic006G173900--Sobic010G099900 Sobic006G173900--Sobic002G393000 Sobic006G173900--Sobic006G275200 Sobic008G136400 Sobic008G136400 Sobic006G173900--Sobic008G136400 Sobic006G173900--Sobic002G414600 Sobic001G119400 Sobic001G119400 Sobic006G173900--Sobic001G119400 Sobic001G423800 Sobic001G423800 Sobic006G173900--Sobic001G423800 Sobic006G173900--Sobic004G177700 Sobic002G393000--Sobic001G119400 Sobic002G393000--Sobic006G275200 Sobic002G393000--Sobic006G173900 Sobic002G393000--Sobic001G423800 Sobic002G393000--Sobic009G008900 Sobic002G393000--Sobic008G136400 Sobic002G393000--Sobic010G099900 Sobic002G393000--Sobic002G414600 Sobic009G183400 Sobic009G183400 Sobic002G393000--Sobic009G183400 Sobic006G275200--Sobic008G136400 Sobic006G275200--Sobic002G393000 Sobic006G275200--Sobic009G008900 Sobic006G275200--Sobic006G173900 Sobic001G097600 Sobic001G097600 Sobic006G275200--Sobic001G097600 Sobic006G275200--Sobic001G119400 Sobic003G367200 Sobic003G367200 Sobic006G275200--Sobic003G367200 Sobic001G317000 Sobic001G317000 Sobic006G275200--Sobic001G317000 Sobic001G038900 Sobic001G038900 Sobic006G275200--Sobic001G038900 Sobic010G099900--Sobic006G173900 Sobic010G099900--Sobic002G393000 Sobic010G099900--Sobic006G275200 Sobic010G099900--Sobic009G008900 Sobic010G099900--Sobic001G119400 Sobic006G127900 Sobic006G127900 Sobic010G099900--Sobic006G127900 Sobic010G099900--Sobic008G136400 Sobic010G099900--Sobic002G414600 Sobic004G216600 Sobic004G216600 Sobic010G099900--Sobic004G216600 Sobic009G008900--Sobic006G173900 Sobic009G008900--Sobic001G119400 Sobic009G008900--Sobic006G275200 Sobic009G008900--Sobic002G393000 Sobic009G008900--Sobic008G136400 Sobic009G008900--Sobic001G423800 Sobic001G177800 Sobic001G177800 Sobic009G008900--Sobic001G177800 Sobic009G008900--Sobic002G414600 Sobic009G008900--Sobic001G038900 Sobic006G267200 Sobic006G267200 Sobic010G086200--Sobic006G267200 Sobic004G065500 Sobic004G065500 Sobic010G086200--Sobic004G065500 Sobic004G321300 Sobic004G321300 Sobic010G086200--Sobic004G321300 Sobic009G141800 Sobic009G141800 Sobic010G086200--Sobic009G141800 Sobic009G129000 Sobic009G129000 Sobic010G086200--Sobic009G129000 Sobic009G143400 Sobic009G143400 Sobic010G086200--Sobic009G143400 Sobic001G459800 Sobic001G459800 Sobic010G086200--Sobic001G459800 Sobic009G033700 Sobic009G033700 Sobic010G086200--Sobic009G033700 Sobic003G393900 Sobic003G393900 Sobic010G086200--Sobic003G393900 Sobic001G281400 Sobic001G281400 Sobic010G149300--Sobic001G281400 Sobic010G149300--Sobic010G086200 Sobic002G267500 Sobic002G267500 Sobic010G149300--Sobic002G267500 Sobic010G149300--Sobic009G143400 Sobic003G181500 Sobic003G181500 Sobic010G149300--Sobic003G181500 Sobic002G046100 Sobic002G046100 Sobic010G149300--Sobic002G046100 Sobic010G149300--Sobic004G177700 Sobic002G345300 Sobic002G345300 Sobic010G149300--Sobic002G345300 Sobic010G149300--Sobic009G129000 Sobic006G230500--Sobic010G086200 Sobic009G200700 Sobic009G200700 Sobic006G230500--Sobic009G200700 Sobic003G382800 Sobic003G382800 Sobic006G230500--Sobic003G382800 Sobic001G387900 Sobic001G387900 Sobic006G230500--Sobic001G387900 Sobic006G230500--Sobic004G177700 Sobic001G320900 Sobic001G320900 Sobic006G230500--Sobic001G320900 Sobic003G148600 Sobic003G148600 Sobic006G230500--Sobic003G148600 Sobic002G423300 Sobic002G423300 Sobic006G230500--Sobic002G423300 Sobic010G217800 Sobic010G217800 Sobic006G230500--Sobic010G217800 Sobic001G252300 Sobic001G252300 Sobic002G414600--Sobic001G252300 Sobic002G414600--Sobic009G183400 Sobic002G414600--Sobic001G097600 Sobic002G414600--Sobic002G393000 Sobic002G414600--Sobic001G119400 Sobic002G414600--Sobic009G008900 Sobic005G051200 Sobic005G051200 Sobic002G414600--Sobic005G051200 Sobic002G414600--Sobic006G173900 Sobic002G414600--Sobic006G275200
Octagon: transcription factors


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