Gene annotation
Transcriptome id Sobic.010G274900.1
Synonym Sb10g030880
Functional annotation serine/threonine-protein kinase Cx32, chloroplast precursor, putative, expressed
UniProt C5Z2K0
Pfam PF00069
Panther DB PTHR27001 PTHR27001:SF222
NCBI CDD KOG1187; Serine/threonine protein kinase
KEGG Orthology -
Gene Ontology GO:0006468; protein phosphorylation GO:0005524ATP binding GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT2G17220 : Protein kinase superfamily protein
RAP-DB (Rice) LOC_Os06g51170.1 : serine/threonine-protein kinase Cx32, chloroplast precursor, putative, expressed
MaizeGDB (Corn) Zm00025a018543
Brachypodium KQJ84062 , KQJ84063 , KQK16654 , PNT61664 , PNT61665
Barley HORVU7Hr1G121690.10 , HORVU7Hr1G121690.11 , HORVU7Hr1G121690.12 , HORVU7Hr1G109590.9 , HORVU7Hr1G109590.8 , HORVU7Hr1G109590.3 , HORVU7Hr1G109590.2 , HORVU7Hr1G109590.1 , HORVU7Hr1G109590.7 , HORVU7Hr1G109590.6 , HORVU7Hr1G109590.5 , HORVU7Hr1G109590.4 , HORVU7Hr1G121690.8 , HORVU7Hr1G121690.9 , HORVU7Hr1G121690.6 , HORVU7Hr1G121690.7 , HORVU7Hr1G121690.4 , HORVU7Hr1G121690.5 , HORVU7Hr1G121690.2 , HORVU7Hr1G121690.3 , HORVU7Hr1G121690.1
Wheat TraesCS7B02G473700 , TraesCSU02G105900 , TraesCS7A02G550300
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G477600 zinc finger protein, putative, expressed -
2 Sobic.003G367200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@zinc finger, C3HC4 type domain containing protein, expressed K19040: E3 ubiquitin-protein ligase ATL10/75/76/77/78
3 Sobic.003G350300 ubiquitin-conjugating enzyme, putative, expressed K10575: UBE2G1, ubiquitin-conjugating enzyme E2 G1
4 Sobic.008G136400 expressed protein -
5 Sobic.010G166500 amino acid transporter, putative, expressed -
6 Sobic.006G275200 CHCH domain containing protein, expressed -
7 Sobic.009G008900 cytochrome b5-like Heme/Steroid binding domain containing protein, expressed -
8 Sobic.007G015600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@- -
9 Sobic.003G357300 MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
10 Sobic.004G321300 Not investigated(PubMedID : 23766026)@AP2 domain containing protein, expressed K09286: EREBP-like factor
11 Sobic.003G297600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Not investigated(PubMedID : 23766026)@ethylene-responsive transcription factor 2, putative, expressed -
12 Sobic.001G140900 helix-loop-helix DNA-binding protein, putative, expressed -
13 Sobic.003G334600 NAC domain transcription factor, putative, expressed -
14 Sobic.002G393000 pyrrolidone-carboxylate peptidase, putative, expressed K01304: pyroglutamyl-peptidase
15 Sobic.004G100700 ethylene-responsive transcription factor TINY, putative, expressed K09286: EREBP-like factor
16 Sobic.001G038900 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@DUF567 domain containing protein, putative, expressed -
17 Sobic.002G333400 KI domain interacting kinase 1, putative, expressed -
18 Sobic.008G050600 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@Not investigated(PubMedID : 23766026)@ethylene-responsive transcription factor ERF110, putative, expressed -
19 Sobic.001G119400 microsomal glutathione S-transferase 3, putative, expressed K00799: GST, glutathione S-transferase
20 Sobic.002G261000 expressed protein -


Gene co-expression network
sample Sobic010G274900 Sobic010G274900 Sobic001G477600 Sobic001G477600 Sobic010G274900--Sobic001G477600 Sobic003G367200 Sobic003G367200 Sobic010G274900--Sobic003G367200 Sobic003G350300 Sobic003G350300 Sobic010G274900--Sobic003G350300 Sobic008G136400 Sobic008G136400 Sobic010G274900--Sobic008G136400 Sobic010G166500 Sobic010G166500 Sobic010G274900--Sobic010G166500 Sobic006G275200 Sobic006G275200 Sobic010G274900--Sobic006G275200 Sobic009G008900 Sobic009G008900 Sobic010G274900--Sobic009G008900 Sobic007G015600 Sobic007G015600 Sobic010G274900--Sobic007G015600 Sobic003G357300 Sobic003G357300 Sobic010G274900--Sobic003G357300 Sobic001G138600 Sobic001G138600 Sobic001G477600--Sobic001G138600 Sobic001G112200 Sobic001G112200 Sobic001G477600--Sobic001G112200 Sobic003G369100 Sobic003G369100 Sobic001G477600--Sobic003G369100 Sobic002G336600 Sobic002G336600 Sobic001G477600--Sobic002G336600 Sobic003G382800 Sobic003G382800 Sobic001G477600--Sobic003G382800 Sobic007G074000 Sobic007G074000 Sobic001G477600--Sobic007G074000 Sobic003G345100 Sobic003G345100 Sobic001G477600--Sobic003G345100 Sobic005G099000 Sobic005G099000 Sobic001G477600--Sobic005G099000 Sobic004G141200 Sobic004G141200 Sobic001G477600--Sobic004G141200 Sobic004G336500 Sobic004G336500 Sobic003G367200--Sobic004G336500 Sobic003G367200--Sobic006G275200 Sobic003G086600 Sobic003G086600 Sobic003G367200--Sobic003G086600 Sobic003G367200--Sobic003G382800 Sobic001G397200 Sobic001G397200 Sobic003G367200--Sobic001G397200 Sobic004G280200 Sobic004G280200 Sobic003G367200--Sobic004G280200 Sobic003G367200--Sobic007G015600 Sobic001G140900 Sobic001G140900 Sobic003G367200--Sobic001G140900 Sobic003G367200--Sobic003G369100 Sobic004G187900 Sobic004G187900 Sobic003G350300--Sobic004G187900 Sobic002G345300 Sobic002G345300 Sobic003G350300--Sobic002G345300 Sobic002G046100 Sobic002G046100 Sobic003G350300--Sobic002G046100 Sobic003G285800 Sobic003G285800 Sobic003G350300--Sobic003G285800 Sobic001G281400 Sobic001G281400 Sobic003G350300--Sobic001G281400 Sobic004G321300 Sobic004G321300 Sobic003G350300--Sobic004G321300 Sobic003G350300--Sobic010G274900 Sobic010G086200 Sobic010G086200 Sobic003G350300--Sobic010G086200 Sobic003G181500 Sobic003G181500 Sobic003G350300--Sobic003G181500 Sobic001G038900 Sobic001G038900 Sobic008G136400--Sobic001G038900 Sobic008G050600 Sobic008G050600 Sobic008G136400--Sobic008G050600 Sobic002G140400 Sobic002G140400 Sobic008G136400--Sobic002G140400 Sobic008G136400--Sobic006G275200 Sobic008G136400--Sobic001G140900 Sobic006G158600 Sobic006G158600 Sobic008G136400--Sobic006G158600 Sobic004G189400 Sobic004G189400 Sobic008G136400--Sobic004G189400 Sobic001G423800 Sobic001G423800 Sobic008G136400--Sobic001G423800 Sobic008G136400--Sobic009G008900 Sobic002G389400 Sobic002G389400 Sobic010G166500--Sobic002G389400 Sobic010G166500--Sobic001G112200 Sobic009G069800 Sobic009G069800 Sobic010G166500--Sobic009G069800 Sobic002G302500 Sobic002G302500 Sobic010G166500--Sobic002G302500 Sobic010G166500--Sobic004G321300 Sobic010G166500--Sobic010G274900 Sobic003G364300 Sobic003G364300 Sobic010G166500--Sobic003G364300 Sobic010G156500 Sobic010G156500 Sobic010G166500--Sobic010G156500 Sobic010G166500--Sobic001G477600 Sobic006G275200--Sobic008G136400 Sobic002G393000 Sobic002G393000 Sobic006G275200--Sobic002G393000 Sobic006G275200--Sobic009G008900 Sobic006G173900 Sobic006G173900 Sobic006G275200--Sobic006G173900 Sobic001G097600 Sobic001G097600 Sobic006G275200--Sobic001G097600 Sobic001G119400 Sobic001G119400 Sobic006G275200--Sobic001G119400 Sobic006G275200--Sobic003G367200 Sobic001G317000 Sobic001G317000 Sobic006G275200--Sobic001G317000 Sobic006G275200--Sobic001G038900 Sobic009G008900--Sobic006G173900 Sobic009G008900--Sobic001G119400 Sobic009G008900--Sobic006G275200 Sobic009G008900--Sobic002G393000 Sobic009G008900--Sobic008G136400 Sobic009G008900--Sobic001G423800 Sobic001G177800 Sobic001G177800 Sobic009G008900--Sobic001G177800 Sobic002G414600 Sobic002G414600 Sobic009G008900--Sobic002G414600 Sobic009G008900--Sobic001G038900 Sobic007G015600--Sobic003G367200 Sobic007G015600--Sobic006G275200 Sobic007G015600--Sobic003G382800 Sobic004G100700 Sobic004G100700 Sobic007G015600--Sobic004G100700 Sobic007G015600--Sobic002G393000 Sobic007G015600--Sobic001G038900 Sobic007G015600--Sobic003G086600 Sobic009G183400 Sobic009G183400 Sobic007G015600--Sobic009G183400 Sobic007G015600--Sobic003G345100 Sobic004G301000 Sobic004G301000 Sobic003G357300--Sobic004G301000 Sobic003G357300--Sobic004G100700 Sobic003G393900 Sobic003G393900 Sobic003G357300--Sobic003G393900 Sobic001G108200 Sobic001G108200 Sobic003G357300--Sobic001G108200 Sobic004G306300 Sobic004G306300 Sobic003G357300--Sobic004G306300 Sobic003G357300--Sobic006G275200 Sobic009G070400 Sobic009G070400 Sobic003G357300--Sobic009G070400 Sobic003G357300--Sobic002G393000 Sobic001G308300 Sobic001G308300 Sobic003G357300--Sobic001G308300
Octagon: transcription factors


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