Gene annotation
Transcriptome id Sobic.001G339801.1
Synonym -
Functional annotation -
UniProt A0A1Z5S8Y9
Pfam PF13499
Panther DB PTHR10891 PTHR10891:SF597
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G44310 : Calcium-binding EF-hand family protein
RAP-DB (Rice) LOC_Os03g29770.1 : EF hand family protein, expressed
MaizeGDB (Corn) Zm00025a002832
Brachypodium KQK07128 , PNT71651
Barley HORVU5Hr1G109290.1
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G414600 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@hypoxia-responsive family protein, putative, expressed -
2 Sobic.001G252300 pectinesterase, putative, expressed K01051: pectinesterase
3 Sobic.005G051200 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@Not investigated(PubMedID : 23766026)@ethylene-responsive transcription factor ERF110, putative, expressed -
4 Sobic.003G162700 expressed protein -
5 Sobic.003G078100 B3 DNA binding domain containing protein, expressed -
6 Sobic.009G070400 expressed protein -
7 Sobic.007G187800 mtN19, putative, expressed -
8 Sobic.006G173900 glutathione peroxidase, putative, expressed K00432: gpx, btuE, glutathione peroxidase
9 Sobic.007G025500 amino acid transporter, putative, expressed -
10 Sobic.001G317200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
11 Sobic.002G393000 pyrrolidone-carboxylate peptidase, putative, expressed K01304: pyroglutamyl-peptidase
12 Sobic.004G166700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@"Beta-fructofuranosidase, cell wall Invertase 2 (Os)"(PubMedID : 27208977)@glycosyl hydrolases, putative, expressed K01193: INV, beta-fructofuranosidase
13 Sobic.001G119400 microsomal glutathione S-transferase 3, putative, expressed K00799: GST, glutathione S-transferase
14 Sobic.004G301000 B-box (BBX) protein(PubMedID : 30626335)@B-box zinc finger family protein, putative, expressed -
15 Sobic.003G357300 MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
16 Sobic.010G274900 serine/threonine-protein kinase Cx32, chloroplast precursor, putative, expressed -
17 Sobic.002G319100 hsp20/alpha crystallin family protein, putative, expressed K13993: HSP20 family protein
18 Sobic.010G176600 - -
19 Sobic.004G216600 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@OsGrx_C2.1 - glutaredoxin subgroup I, expressed K03676: grxC, GLRX, glutaredoxin 3
20 Sobic.009G008900 cytochrome b5-like Heme/Steroid binding domain containing protein, expressed -


Gene co-expression network
sample Sobic001G339801 Sobic001G339801 Sobic002G414600 Sobic002G414600 Sobic001G339801--Sobic002G414600 Sobic001G252300 Sobic001G252300 Sobic001G339801--Sobic001G252300 Sobic005G051200 Sobic005G051200 Sobic001G339801--Sobic005G051200 Sobic003G162700 Sobic003G162700 Sobic001G339801--Sobic003G162700 Sobic003G078100 Sobic003G078100 Sobic001G339801--Sobic003G078100 Sobic009G070400 Sobic009G070400 Sobic001G339801--Sobic009G070400 Sobic007G187800 Sobic007G187800 Sobic001G339801--Sobic007G187800 Sobic006G173900 Sobic006G173900 Sobic001G339801--Sobic006G173900 Sobic007G025500 Sobic007G025500 Sobic001G339801--Sobic007G025500 Sobic002G414600--Sobic001G252300 Sobic009G183400 Sobic009G183400 Sobic002G414600--Sobic009G183400 Sobic001G097600 Sobic001G097600 Sobic002G414600--Sobic001G097600 Sobic002G393000 Sobic002G393000 Sobic002G414600--Sobic002G393000 Sobic001G119400 Sobic001G119400 Sobic002G414600--Sobic001G119400 Sobic009G008900 Sobic009G008900 Sobic002G414600--Sobic009G008900 Sobic002G414600--Sobic005G051200 Sobic002G414600--Sobic006G173900 Sobic006G275200 Sobic006G275200 Sobic002G414600--Sobic006G275200 Sobic001G252300--Sobic002G414600 Sobic004G166700 Sobic004G166700 Sobic001G252300--Sobic004G166700 Sobic001G252300--Sobic005G051200 Sobic004G208700 Sobic004G208700 Sobic001G252300--Sobic004G208700 Sobic001G317200 Sobic001G317200 Sobic001G252300--Sobic001G317200 Sobic003G297600 Sobic003G297600 Sobic001G252300--Sobic003G297600 Sobic002G416600 Sobic002G416600 Sobic001G252300--Sobic002G416600 Sobic008G050600 Sobic008G050600 Sobic001G252300--Sobic008G050600 Sobic003G286600 Sobic003G286600 Sobic001G252300--Sobic003G286600 Sobic005G051200--Sobic001G317200 Sobic009G035200 Sobic009G035200 Sobic005G051200--Sobic009G035200 Sobic005G051200--Sobic008G050600 Sobic005G051200--Sobic002G416600 Sobic009G164600 Sobic009G164600 Sobic005G051200--Sobic009G164600 Sobic003G345100 Sobic003G345100 Sobic005G051200--Sobic003G345100 Sobic005G051200--Sobic003G286600 Sobic005G063100 Sobic005G063100 Sobic005G051200--Sobic005G063100 Sobic005G051200--Sobic001G252300 Sobic001G067601 Sobic001G067601 Sobic003G162700--Sobic001G067601 Sobic003G162700--Sobic009G070400 Sobic002G333400 Sobic002G333400 Sobic003G162700--Sobic002G333400 Sobic006G158600 Sobic006G158600 Sobic003G162700--Sobic006G158600 Sobic003G334600 Sobic003G334600 Sobic003G162700--Sobic003G334600 Sobic010G238600 Sobic010G238600 Sobic003G162700--Sobic010G238600 Sobic010G274900 Sobic010G274900 Sobic003G162700--Sobic010G274900 Sobic003G162700--Sobic007G025500 Sobic008G136400 Sobic008G136400 Sobic003G162700--Sobic008G136400 Sobic003G078100--Sobic009G008900 Sobic003G078100--Sobic002G393000 Sobic003G078100--Sobic006G158600 Sobic001G387900 Sobic001G387900 Sobic003G078100--Sobic001G387900 Sobic001G423800 Sobic001G423800 Sobic003G078100--Sobic001G423800 Sobic003G078100--Sobic006G275200 Sobic007G057000 Sobic007G057000 Sobic003G078100--Sobic007G057000 Sobic003G078100--Sobic001G119400 Sobic002G361100 Sobic002G361100 Sobic003G078100--Sobic002G361100 Sobic010G176600 Sobic010G176600 Sobic009G070400--Sobic010G176600 Sobic009G070400--Sobic001G423800 Sobic009G070400--Sobic002G393000 Sobic009G070400--Sobic008G136400 Sobic004G301000 Sobic004G301000 Sobic009G070400--Sobic004G301000 Sobic009G070400--Sobic006G158600 Sobic009G070400--Sobic003G286600 Sobic002G140400 Sobic002G140400 Sobic009G070400--Sobic002G140400 Sobic001G038900 Sobic001G038900 Sobic009G070400--Sobic001G038900 Sobic007G187800--Sobic003G078100 Sobic007G187800--Sobic009G008900 Sobic007G187800--Sobic007G025500 Sobic007G187800--Sobic008G136400 Sobic007G187800--Sobic006G158600 Sobic007G187800--Sobic006G173900 Sobic007G187800--Sobic009G183400 Sobic007G187800--Sobic001G119400 Sobic007G187800--Sobic002G414600 Sobic006G173900--Sobic009G008900 Sobic010G099900 Sobic010G099900 Sobic006G173900--Sobic010G099900 Sobic006G173900--Sobic002G393000 Sobic006G173900--Sobic006G275200 Sobic006G173900--Sobic008G136400 Sobic006G173900--Sobic002G414600 Sobic006G173900--Sobic001G119400 Sobic006G173900--Sobic001G423800 Sobic004G177700 Sobic004G177700 Sobic006G173900--Sobic004G177700 Sobic002G034800 Sobic002G034800 Sobic007G025500--Sobic002G034800 Sobic007G025500--Sobic001G119400 Sobic007G025500--Sobic003G297600 Sobic002G366600 Sobic002G366600 Sobic007G025500--Sobic002G366600 Sobic009G139400 Sobic009G139400 Sobic007G025500--Sobic009G139400 Sobic010G066700 Sobic010G066700 Sobic007G025500--Sobic010G066700 Sobic007G025500--Sobic009G183400 Sobic009G077800 Sobic009G077800 Sobic007G025500--Sobic009G077800 Sobic010G136000 Sobic010G136000 Sobic007G025500--Sobic010G136000
Octagon: transcription factors


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