Gene annotation
Transcriptome id Sobic.002G319100.1
Synonym Sb02g034760
Functional annotation hsp20/alpha crystallin family protein, putative, expressed
UniProt A0A1B6QEK7
Pfam PF00011
Panther DB PTHR11527 PTHR11527:SF97
NCBI CDD -
KEGG Orthology K13993; HSP20 family protein
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G21870 : HSP20-like chaperones superfamily protein
RAP-DB (Rice) LOC_Os07g33350.2 : hsp20/alpha crystallin family protein, putative, expressed
MaizeGDB (Corn) Zm00025a048226
Brachypodium -
Barley HORVU2Hr1G046370.1 , HORVU2Hr1G046370.2 , HORVU2Hr1G046370.3 , HORVU2Hr1G046370.4
Wheat TraesCS2B02G247300 , TraesCS2D02G227800
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G025500 amino acid transporter, putative, expressed -
2 Sobic.008G113000 Ser/Thr protein phosphatase family protein, putative, expressed -
3 Sobic.003G162700 expressed protein -
4 Sobic.001G339801 - -
5 Sobic.001G091600 expressed protein -
6 Sobic.003G078100 B3 DNA binding domain containing protein, expressed -
7 Sobic.007G187800 mtN19, putative, expressed -
8 Sobic.003G041600 DUF623 domain containing protein, expressed -
9 Sobic.006G246100 one cut domain family member 3, putative, expressed -
10 Sobic.004G179600 VP15, putative, expressed K03635: MOCS2B, molybdopterin synthase catalytic subunit
11 Sobic.006G161100 "domain confirmed by Pfam database, expression not supported"(PubMedID : 20499123)@OsSAUR11 - Auxin-responsive SAUR gene family member, expressed K14488: SAUR family protein
12 Sobic.003G240600 VQ domain containing protein, putative, expressed -
13 Sobic.002G034800 - -
14 Sobic.009G221400 B3 DNA binding domain containing protein, expressed K09287: RAV-like factor
15 Sobic.002G057900 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@thioredoxin, putative, expressed K03671: thioredoxin 1
16 Sobic.004G245500 expressed protein -
17 Sobic.002G070200 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@LTPL84 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
18 Sobic.002G366600 expressed protein -
19 Sobic.001G252300 pectinesterase, putative, expressed K01051: pectinesterase
20 Sobic.003G297600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Not investigated(PubMedID : 23766026)@ethylene-responsive transcription factor 2, putative, expressed -


Gene co-expression network
sample Sobic002G319100 Sobic002G319100 Sobic007G025500 Sobic007G025500 Sobic002G319100--Sobic007G025500 Sobic008G113000 Sobic008G113000 Sobic002G319100--Sobic008G113000 Sobic003G162700 Sobic003G162700 Sobic002G319100--Sobic003G162700 Sobic001G339801 Sobic001G339801 Sobic002G319100--Sobic001G339801 Sobic001G091600 Sobic001G091600 Sobic002G319100--Sobic001G091600 Sobic003G078100 Sobic003G078100 Sobic002G319100--Sobic003G078100 Sobic007G187800 Sobic007G187800 Sobic002G319100--Sobic007G187800 Sobic003G041600 Sobic003G041600 Sobic002G319100--Sobic003G041600 Sobic006G246100 Sobic006G246100 Sobic002G319100--Sobic006G246100 Sobic002G034800 Sobic002G034800 Sobic007G025500--Sobic002G034800 Sobic001G119400 Sobic001G119400 Sobic007G025500--Sobic001G119400 Sobic003G297600 Sobic003G297600 Sobic007G025500--Sobic003G297600 Sobic002G366600 Sobic002G366600 Sobic007G025500--Sobic002G366600 Sobic009G139400 Sobic009G139400 Sobic007G025500--Sobic009G139400 Sobic010G066700 Sobic010G066700 Sobic007G025500--Sobic010G066700 Sobic009G183400 Sobic009G183400 Sobic007G025500--Sobic009G183400 Sobic009G077800 Sobic009G077800 Sobic007G025500--Sobic009G077800 Sobic010G136000 Sobic010G136000 Sobic007G025500--Sobic010G136000 Sobic008G113000--Sobic002G319100 Sobic008G113000--Sobic003G041600 Sobic008G113000--Sobic007G025500 Sobic008G113000--Sobic003G162700 Sobic010G166500 Sobic010G166500 Sobic008G113000--Sobic010G166500 Sobic002G345850 Sobic002G345850 Sobic008G113000--Sobic002G345850 Sobic002G302500 Sobic002G302500 Sobic008G113000--Sobic002G302500 Sobic010G178200 Sobic010G178200 Sobic008G113000--Sobic010G178200 Sobic008G113000--Sobic001G091600 Sobic001G067601 Sobic001G067601 Sobic003G162700--Sobic001G067601 Sobic009G070400 Sobic009G070400 Sobic003G162700--Sobic009G070400 Sobic002G333400 Sobic002G333400 Sobic003G162700--Sobic002G333400 Sobic006G158600 Sobic006G158600 Sobic003G162700--Sobic006G158600 Sobic003G334600 Sobic003G334600 Sobic003G162700--Sobic003G334600 Sobic010G238600 Sobic010G238600 Sobic003G162700--Sobic010G238600 Sobic010G274900 Sobic010G274900 Sobic003G162700--Sobic010G274900 Sobic003G162700--Sobic007G025500 Sobic008G136400 Sobic008G136400 Sobic003G162700--Sobic008G136400 Sobic002G414600 Sobic002G414600 Sobic001G339801--Sobic002G414600 Sobic001G252300 Sobic001G252300 Sobic001G339801--Sobic001G252300 Sobic005G051200 Sobic005G051200 Sobic001G339801--Sobic005G051200 Sobic001G339801--Sobic003G162700 Sobic001G339801--Sobic003G078100 Sobic001G339801--Sobic009G070400 Sobic001G339801--Sobic007G187800 Sobic006G173900 Sobic006G173900 Sobic001G339801--Sobic006G173900 Sobic001G339801--Sobic007G025500 Sobic001G091600--Sobic003G041600 Sobic003G364300 Sobic003G364300 Sobic001G091600--Sobic003G364300 Sobic006G143400 Sobic006G143400 Sobic001G091600--Sobic006G143400 Sobic004G192100 Sobic004G192100 Sobic001G091600--Sobic004G192100 Sobic010G156500 Sobic010G156500 Sobic001G091600--Sobic010G156500 Sobic003G364000 Sobic003G364000 Sobic001G091600--Sobic003G364000 Sobic001G091600--Sobic007G025500 Sobic005G005600 Sobic005G005600 Sobic001G091600--Sobic005G005600 Sobic001G091600--Sobic010G166500 Sobic009G008900 Sobic009G008900 Sobic003G078100--Sobic009G008900 Sobic002G393000 Sobic002G393000 Sobic003G078100--Sobic002G393000 Sobic003G078100--Sobic006G158600 Sobic001G387900 Sobic001G387900 Sobic003G078100--Sobic001G387900 Sobic001G423800 Sobic001G423800 Sobic003G078100--Sobic001G423800 Sobic006G275200 Sobic006G275200 Sobic003G078100--Sobic006G275200 Sobic007G057000 Sobic007G057000 Sobic003G078100--Sobic007G057000 Sobic003G078100--Sobic001G119400 Sobic002G361100 Sobic002G361100 Sobic003G078100--Sobic002G361100 Sobic007G187800--Sobic003G078100 Sobic007G187800--Sobic009G008900 Sobic007G187800--Sobic007G025500 Sobic007G187800--Sobic008G136400 Sobic007G187800--Sobic006G158600 Sobic007G187800--Sobic006G173900 Sobic007G187800--Sobic009G183400 Sobic007G187800--Sobic001G119400 Sobic007G187800--Sobic002G414600 Sobic009G221400 Sobic009G221400 Sobic003G041600--Sobic009G221400 Sobic008G044300 Sobic008G044300 Sobic003G041600--Sobic008G044300 Sobic003G041600--Sobic006G143400 Sobic009G069800 Sobic009G069800 Sobic003G041600--Sobic009G069800 Sobic003G041600--Sobic003G364300 Sobic003G041600--Sobic001G091600 Sobic003G041600--Sobic010G166500 Sobic001G477600 Sobic001G477600 Sobic003G041600--Sobic001G477600 Sobic003G041600--Sobic010G156500 Sobic003G296300 Sobic003G296300 Sobic006G246100--Sobic003G296300 Sobic005G080200 Sobic005G080200 Sobic006G246100--Sobic005G080200 Sobic010G194300 Sobic010G194300 Sobic006G246100--Sobic010G194300 Sobic006G246100--Sobic002G319100 Sobic001G345400 Sobic001G345400 Sobic006G246100--Sobic001G345400 Sobic004G114400 Sobic004G114400 Sobic006G246100--Sobic004G114400 Sobic004G010300 Sobic004G010300 Sobic006G246100--Sobic004G010300 Sobic010G194900 Sobic010G194900 Sobic006G246100--Sobic010G194900 Sobic004G195000 Sobic004G195000 Sobic006G246100--Sobic004G195000
Octagon: transcription factors


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