Gene annotation
Transcriptome id Sobic.006G161100.1
Synonym SbSAUR43, Sb06g023800, small auxin up RNA
Functional annotation "domain confirmed by Pfam database, expression not supported" (PubMedID : 20499123)
OsSAUR11 - Auxin-responsive SAUR gene family member, expressed
UniProt C5YCY8
Pfam PF02519
Panther DB PTHR31374 PTHR31374:SF56
NCBI CDD -
KEGG Orthology K14488; SAUR family protein
Gene Ontology GO:0009733; response to auxin


Orthologs (automatic annotation)
TAIR AT3G60690 : SAUR-like auxin-responsive protein family
RAP-DB (Rice) LOC_Os02g42990.1 : OsSAUR11 - Auxin-responsive SAUR gene family member, expressed
MaizeGDB (Corn) Zm00025a020962 , Zm00025a056604 , Zm00025a009856 , Zm00025a010423 , Zm00025a032144 , Zm00025a056980 , Zm00025a013968
Brachypodium KQJ84465 , KQK00528
Barley HORVU2Hr1G100360.3 , HORVU2Hr1G092070.2 , HORVU2Hr1G092070.1 , HORVU2Hr1G100360.2 , HORVU2Hr1G100360.1
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G091600 expressed protein -
2 Sobic.009G221400 B3 DNA binding domain containing protein, expressed K09287: RAV-like factor
3 Sobic.007G025500 amino acid transporter, putative, expressed -
4 Sobic.002G319100 hsp20/alpha crystallin family protein, putative, expressed K13993: HSP20 family protein
5 Sobic.008G044300 U-box domain-containing protein, putative, expressed -
6 Sobic.010G088700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@phosphate-induced protein 1 conserved region domain containing protein, expressed -
7 Sobic.004G192100 uncharacterized Cys-rich domain containing protein, putative, expressed -
8 Sobic.002G353900 "Belonging to the Sdw3 locus, Sbi_sdw3"(PubMedID : 20464438)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@transporter family protein, putative, expressed -
9 Sobic.003G041600 DUF623 domain containing protein, expressed -
10 Sobic.003G364000 glycosyl hydrolase, putative, expressed K01183: chitinase
11 Sobic.003G382600 ARGOS, putative, expressed -
12 Sobic.002G192000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@AN1-like zinc finger domain containing protein, expressed -
13 Sobic.003G297600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Not investigated(PubMedID : 23766026)@ethylene-responsive transcription factor 2, putative, expressed -
14 Sobic.003G280200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@expressed protein -
15 Sobic.010G156500 expressed protein -
16 Sobic.002G034800 - -
17 Sobic.001G192600 mitochondrial import inner membrane translocase subunit Tim17, putative, expressed K17794: mitochondrial import inner membrane translocase subunit TIM23
18 Sobic.009G139400 expressed protein -
19 Sobic.007G107000 pirin, putative, expressed K06911: quercetin 2,3-dioxygenase
20 Sobic.010G066700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Protein anthranilate N-benzoyltransferase protein 1 (Os)(PubMedID : 27208977)@transferase family protein, putative, expressed -


Gene co-expression network
sample Sobic006G161100 Sobic006G161100 Sobic001G091600 Sobic001G091600 Sobic006G161100--Sobic001G091600 Sobic009G221400 Sobic009G221400 Sobic006G161100--Sobic009G221400 Sobic007G025500 Sobic007G025500 Sobic006G161100--Sobic007G025500 Sobic002G319100 Sobic002G319100 Sobic006G161100--Sobic002G319100 Sobic008G044300 Sobic008G044300 Sobic006G161100--Sobic008G044300 Sobic010G088700 Sobic010G088700 Sobic006G161100--Sobic010G088700 Sobic004G192100 Sobic004G192100 Sobic006G161100--Sobic004G192100 Sobic002G353900 Sobic002G353900 Sobic006G161100--Sobic002G353900 Sobic003G041600 Sobic003G041600 Sobic006G161100--Sobic003G041600 Sobic001G091600--Sobic003G041600 Sobic003G364300 Sobic003G364300 Sobic001G091600--Sobic003G364300 Sobic006G143400 Sobic006G143400 Sobic001G091600--Sobic006G143400 Sobic001G091600--Sobic004G192100 Sobic010G156500 Sobic010G156500 Sobic001G091600--Sobic010G156500 Sobic003G364000 Sobic003G364000 Sobic001G091600--Sobic003G364000 Sobic001G091600--Sobic007G025500 Sobic005G005600 Sobic005G005600 Sobic001G091600--Sobic005G005600 Sobic010G166500 Sobic010G166500 Sobic001G091600--Sobic010G166500 Sobic009G221400--Sobic002G353900 Sobic009G221400--Sobic003G041600 Sobic006G158600 Sobic006G158600 Sobic009G221400--Sobic006G158600 Sobic009G221400--Sobic008G044300 Sobic002G336600 Sobic002G336600 Sobic009G221400--Sobic002G336600 Sobic001G477600 Sobic001G477600 Sobic009G221400--Sobic001G477600 Sobic004G208700 Sobic004G208700 Sobic009G221400--Sobic004G208700 Sobic009G070400 Sobic009G070400 Sobic009G221400--Sobic009G070400 Sobic002G192000 Sobic002G192000 Sobic009G221400--Sobic002G192000 Sobic002G034800 Sobic002G034800 Sobic007G025500--Sobic002G034800 Sobic001G119400 Sobic001G119400 Sobic007G025500--Sobic001G119400 Sobic003G297600 Sobic003G297600 Sobic007G025500--Sobic003G297600 Sobic002G366600 Sobic002G366600 Sobic007G025500--Sobic002G366600 Sobic009G139400 Sobic009G139400 Sobic007G025500--Sobic009G139400 Sobic010G066700 Sobic010G066700 Sobic007G025500--Sobic010G066700 Sobic009G183400 Sobic009G183400 Sobic007G025500--Sobic009G183400 Sobic009G077800 Sobic009G077800 Sobic007G025500--Sobic009G077800 Sobic010G136000 Sobic010G136000 Sobic007G025500--Sobic010G136000 Sobic002G319100--Sobic007G025500 Sobic008G113000 Sobic008G113000 Sobic002G319100--Sobic008G113000 Sobic003G162700 Sobic003G162700 Sobic002G319100--Sobic003G162700 Sobic001G339801 Sobic001G339801 Sobic002G319100--Sobic001G339801 Sobic002G319100--Sobic001G091600 Sobic003G078100 Sobic003G078100 Sobic002G319100--Sobic003G078100 Sobic007G187800 Sobic007G187800 Sobic002G319100--Sobic007G187800 Sobic002G319100--Sobic003G041600 Sobic006G246100 Sobic006G246100 Sobic002G319100--Sobic006G246100 Sobic001G310600 Sobic001G310600 Sobic008G044300--Sobic001G310600 Sobic008G044300--Sobic003G041600 Sobic008G044300--Sobic009G221400 Sobic001G112200 Sobic001G112200 Sobic008G044300--Sobic001G112200 Sobic003G364600 Sobic003G364600 Sobic008G044300--Sobic003G364600 Sobic005G186100 Sobic005G186100 Sobic008G044300--Sobic005G186100 Sobic001G279500 Sobic001G279500 Sobic008G044300--Sobic001G279500 Sobic010G225251 Sobic010G225251 Sobic008G044300--Sobic010G225251 Sobic002G338500 Sobic002G338500 Sobic008G044300--Sobic002G338500 Sobic010G088700--Sobic003G364000 Sobic010G259500 Sobic010G259500 Sobic010G088700--Sobic010G259500 Sobic010G088700--Sobic002G034800 Sobic009G217700 Sobic009G217700 Sobic010G088700--Sobic009G217700 Sobic001G365100 Sobic001G365100 Sobic010G088700--Sobic001G365100 Sobic001G433900 Sobic001G433900 Sobic010G088700--Sobic001G433900 Sobic003G319700 Sobic003G319700 Sobic010G088700--Sobic003G319700 Sobic010G088700--Sobic010G066700 Sobic005G213500 Sobic005G213500 Sobic010G088700--Sobic005G213500 Sobic010G052700 Sobic010G052700 Sobic004G192100--Sobic010G052700 Sobic004G192100--Sobic009G077800 Sobic004G192100--Sobic009G221400 Sobic004G192100--Sobic001G091600 Sobic004G192100--Sobic003G297600 Sobic004G192100--Sobic002G353900 Sobic004G192100--Sobic007G025500 Sobic002G302500 Sobic002G302500 Sobic004G192100--Sobic002G302500 Sobic002G004900 Sobic002G004900 Sobic004G192100--Sobic002G004900 Sobic002G055700 Sobic002G055700 Sobic002G353900--Sobic002G055700 Sobic003G382600 Sobic003G382600 Sobic002G353900--Sobic003G382600 Sobic001G367600 Sobic001G367600 Sobic002G353900--Sobic001G367600 Sobic002G353900--Sobic002G302500 Sobic002G353900--Sobic002G192000 Sobic002G353900--Sobic009G221400 Sobic002G353900--Sobic009G139400 Sobic002G353900--Sobic006G158600 Sobic009G234100 Sobic009G234100 Sobic002G353900--Sobic009G234100 Sobic003G041600--Sobic009G221400 Sobic003G041600--Sobic008G044300 Sobic003G041600--Sobic006G143400 Sobic009G069800 Sobic009G069800 Sobic003G041600--Sobic009G069800 Sobic003G041600--Sobic003G364300 Sobic003G041600--Sobic001G091600 Sobic003G041600--Sobic010G166500 Sobic003G041600--Sobic001G477600 Sobic003G041600--Sobic010G156500
Octagon: transcription factors


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