Gene annotation
Transcriptome id Sobic.001G091600.1
Synonym Sb01g008250
Functional annotation expressed protein
UniProt C5X162
Pfam PF07911
Panther DB PTHR33108 PTHR33108:SF8
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G22540 : Protein of unknown function (DUF1677)
RAP-DB (Rice) LOC_Os03g53540.1 : expressed protein
MaizeGDB (Corn) Zm00025a016817
Brachypodium -
Barley HORVU5Hr1G094590.1
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G041600 DUF623 domain containing protein, expressed -
2 Sobic.003G364300 similar to Basic class III chitinase OsChib3b precursor(PubMedID : 29862293)@glycosyl hydrolase, putative, expressed K01183: chitinase
3 Sobic.006G143400 expressed protein -
4 Sobic.004G192100 uncharacterized Cys-rich domain containing protein, putative, expressed -
5 Sobic.010G156500 expressed protein -
6 Sobic.003G364000 glycosyl hydrolase, putative, expressed K01183: chitinase
7 Sobic.007G025500 amino acid transporter, putative, expressed -
8 Sobic.005G005600 prenylated rab acceptor, putative, expressed -
9 Sobic.010G166500 amino acid transporter, putative, expressed -
10 Sobic.009G221400 B3 DNA binding domain containing protein, expressed K09287: RAV-like factor
11 Sobic.009G231000 - -
12 Sobic.006G161100 "domain confirmed by Pfam database, expression not supported"(PubMedID : 20499123)@OsSAUR11 - Auxin-responsive SAUR gene family member, expressed K14488: SAUR family protein
13 Sobic.002G353900 "Belonging to the Sdw3 locus, Sbi_sdw3"(PubMedID : 20464438)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@transporter family protein, putative, expressed -
14 Sobic.008G044300 U-box domain-containing protein, putative, expressed -
15 Sobic.002G302500 -(PubMedID : 29147737)@serine/threonine-protein kinase receptor precursor, putative, expressed -
16 Sobic.003G050400 phospholipase D, putative, expressed K01115: phospholipase D1/2
17 Sobic.002G034800 - -
18 Sobic.009G217700 - -
19 Sobic.004G247600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@hydrolase, NUDIX family, domain containing protein, expressed K07766: diphosphoinositol-polyphosphate diphosphatase
20 Sobic.002G338500 sugar transporter 1(PubMedID : 26465154)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@transporter family protein, putative, expressed -


Gene co-expression network
sample Sobic001G091600 Sobic001G091600 Sobic003G041600 Sobic003G041600 Sobic001G091600--Sobic003G041600 Sobic003G364300 Sobic003G364300 Sobic001G091600--Sobic003G364300 Sobic006G143400 Sobic006G143400 Sobic001G091600--Sobic006G143400 Sobic004G192100 Sobic004G192100 Sobic001G091600--Sobic004G192100 Sobic010G156500 Sobic010G156500 Sobic001G091600--Sobic010G156500 Sobic003G364000 Sobic003G364000 Sobic001G091600--Sobic003G364000 Sobic007G025500 Sobic007G025500 Sobic001G091600--Sobic007G025500 Sobic005G005600 Sobic005G005600 Sobic001G091600--Sobic005G005600 Sobic010G166500 Sobic010G166500 Sobic001G091600--Sobic010G166500 Sobic009G221400 Sobic009G221400 Sobic003G041600--Sobic009G221400 Sobic008G044300 Sobic008G044300 Sobic003G041600--Sobic008G044300 Sobic003G041600--Sobic006G143400 Sobic009G069800 Sobic009G069800 Sobic003G041600--Sobic009G069800 Sobic003G041600--Sobic003G364300 Sobic003G041600--Sobic001G091600 Sobic003G041600--Sobic010G166500 Sobic001G477600 Sobic001G477600 Sobic003G041600--Sobic001G477600 Sobic003G041600--Sobic010G156500 Sobic003G364300--Sobic010G156500 Sobic009G231000 Sobic009G231000 Sobic003G364300--Sobic009G231000 Sobic002G338500 Sobic002G338500 Sobic003G364300--Sobic002G338500 Sobic003G364300--Sobic003G364000 Sobic007G008100 Sobic007G008100 Sobic003G364300--Sobic007G008100 Sobic002G042000 Sobic002G042000 Sobic003G364300--Sobic002G042000 Sobic003G382600 Sobic003G382600 Sobic003G364300--Sobic003G382600 Sobic001G054500 Sobic001G054500 Sobic003G364300--Sobic001G054500 Sobic002G302500 Sobic002G302500 Sobic003G364300--Sobic002G302500 Sobic006G143400--Sobic005G005600 Sobic006G143400--Sobic003G041600 Sobic009G159400 Sobic009G159400 Sobic006G143400--Sobic009G159400 Sobic010G259600 Sobic010G259600 Sobic006G143400--Sobic010G259600 Sobic008G185400 Sobic008G185400 Sobic006G143400--Sobic008G185400 Sobic004G075000 Sobic004G075000 Sobic006G143400--Sobic004G075000 Sobic006G143400--Sobic003G364300 Sobic007G166000 Sobic007G166000 Sobic006G143400--Sobic007G166000 Sobic001G449600 Sobic001G449600 Sobic006G143400--Sobic001G449600 Sobic010G052700 Sobic010G052700 Sobic004G192100--Sobic010G052700 Sobic009G077800 Sobic009G077800 Sobic004G192100--Sobic009G077800 Sobic004G192100--Sobic009G221400 Sobic004G192100--Sobic001G091600 Sobic003G297600 Sobic003G297600 Sobic004G192100--Sobic003G297600 Sobic002G353900 Sobic002G353900 Sobic004G192100--Sobic002G353900 Sobic004G192100--Sobic007G025500 Sobic004G192100--Sobic002G302500 Sobic002G004900 Sobic002G004900 Sobic004G192100--Sobic002G004900 Sobic010G156500--Sobic003G364300 Sobic010G156500--Sobic002G338500 Sobic010G156500--Sobic003G364000 Sobic010G156500--Sobic003G382600 Sobic005G213500 Sobic005G213500 Sobic010G156500--Sobic005G213500 Sobic001G279500 Sobic001G279500 Sobic010G156500--Sobic001G279500 Sobic010G156500--Sobic002G302500 Sobic003G280200 Sobic003G280200 Sobic010G156500--Sobic003G280200 Sobic010G156500--Sobic009G231000 Sobic010G088700 Sobic010G088700 Sobic003G364000--Sobic010G088700 Sobic009G217700 Sobic009G217700 Sobic003G364000--Sobic009G217700 Sobic003G364000--Sobic010G156500 Sobic003G364000--Sobic003G364300 Sobic003G364000--Sobic003G280200 Sobic010G259500 Sobic010G259500 Sobic003G364000--Sobic010G259500 Sobic003G364000--Sobic005G213500 Sobic002G034800 Sobic002G034800 Sobic003G364000--Sobic002G034800 Sobic003G364000--Sobic003G382600 Sobic007G025500--Sobic002G034800 Sobic001G119400 Sobic001G119400 Sobic007G025500--Sobic001G119400 Sobic007G025500--Sobic003G297600 Sobic002G366600 Sobic002G366600 Sobic007G025500--Sobic002G366600 Sobic009G139400 Sobic009G139400 Sobic007G025500--Sobic009G139400 Sobic010G066700 Sobic010G066700 Sobic007G025500--Sobic010G066700 Sobic009G183400 Sobic009G183400 Sobic007G025500--Sobic009G183400 Sobic007G025500--Sobic009G077800 Sobic010G136000 Sobic010G136000 Sobic007G025500--Sobic010G136000 Sobic003G319700 Sobic003G319700 Sobic005G005600--Sobic003G319700 Sobic005G005600--Sobic001G449600 Sobic005G005600--Sobic006G143400 Sobic005G005600--Sobic009G217700 Sobic005G005600--Sobic005G213500 Sobic005G005600--Sobic007G166000 Sobic005G005600--Sobic003G364000 Sobic001G433900 Sobic001G433900 Sobic005G005600--Sobic001G433900 Sobic009G139700 Sobic009G139700 Sobic005G005600--Sobic009G139700 Sobic002G389400 Sobic002G389400 Sobic010G166500--Sobic002G389400 Sobic001G112200 Sobic001G112200 Sobic010G166500--Sobic001G112200 Sobic010G166500--Sobic009G069800 Sobic010G166500--Sobic002G302500 Sobic004G321300 Sobic004G321300 Sobic010G166500--Sobic004G321300 Sobic010G274900 Sobic010G274900 Sobic010G166500--Sobic010G274900 Sobic010G166500--Sobic003G364300 Sobic010G166500--Sobic010G156500 Sobic010G166500--Sobic001G477600
Octagon: transcription factors


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