Gene annotation
Transcriptome id Sobic.006G246100.1
Synonym Sb06g031170
Functional annotation one cut domain family member 3, putative, expressed
UniProt A0A1Z5RG31
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os04g56100.1 : one cut domain family member 3, putative, expressed
MaizeGDB (Corn) Zm00025a009484
Brachypodium -
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.006G246100


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G296300 WRKY13, expressed -
2 Sobic.005G080200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Ser/Thr protein phosphatase family protein, putative, expressed -
3 Sobic.010G194300 VQ domain containing protein, putative, expressed -
4 Sobic.002G319100 hsp20/alpha crystallin family protein, putative, expressed K13993: HSP20 family protein
5 Sobic.001G345400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@ring-H2 zinc finger protein, putative, expressed -
6 Sobic.004G114400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@- -
7 Sobic.004G010300 glycerol-3-phosphate acyltransferase, putative, expressed K13508: glycerol-3-phosphate acyltransferase
8 Sobic.010G194900 bZIP transcription factor domain containing protein, expressed -
9 Sobic.004G195000 heavy metal transport/detoxification protein, putative, expressed -
10 Sobic.001G530350 - -
11 Sobic.001G061101 - -
12 Sobic.003G277500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@methyltransferase, putative, expressed -
13 Sobic.009G025900 "domain confirmed by Pfam database, expressed in leaf and root, expression induced by IAA treatment"(PubMedID : 20499123)@DUF260 domain containing protein, putative, expressed -
14 Sobic.009G065300 expressed protein -
15 Sobic.001G195100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cytochrome P450, putative, expressed -
16 Sobic.004G101000 helix-loop-helix DNA-binding domain containing protein, expressed -
17 Sobic.003G135700 - -
18 Sobic.002G318000 DUF584 domain containing protein, putative, expressed -
19 Sobic.007G025500 amino acid transporter, putative, expressed -
20 Sobic.003G360200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@homeobox domain containing protein, expressed -


Gene co-expression network
sample Sobic006G246100 Sobic006G246100 Sobic003G296300 Sobic003G296300 Sobic006G246100--Sobic003G296300 Sobic005G080200 Sobic005G080200 Sobic006G246100--Sobic005G080200 Sobic010G194300 Sobic010G194300 Sobic006G246100--Sobic010G194300 Sobic002G319100 Sobic002G319100 Sobic006G246100--Sobic002G319100 Sobic001G345400 Sobic001G345400 Sobic006G246100--Sobic001G345400 Sobic004G114400 Sobic004G114400 Sobic006G246100--Sobic004G114400 Sobic004G010300 Sobic004G010300 Sobic006G246100--Sobic004G010300 Sobic010G194900 Sobic010G194900 Sobic006G246100--Sobic010G194900 Sobic004G195000 Sobic004G195000 Sobic006G246100--Sobic004G195000 Sobic003G296300--Sobic001G345400 Sobic003G296300--Sobic006G246100 Sobic004G101000 Sobic004G101000 Sobic003G296300--Sobic004G101000 Sobic006G167800 Sobic006G167800 Sobic003G296300--Sobic006G167800 Sobic001G093900 Sobic001G093900 Sobic003G296300--Sobic001G093900 Sobic010G157500 Sobic010G157500 Sobic003G296300--Sobic010G157500 Sobic009G038000 Sobic009G038000 Sobic003G296300--Sobic009G038000 Sobic001G526000 Sobic001G526000 Sobic003G296300--Sobic001G526000 Sobic001G195100 Sobic001G195100 Sobic003G296300--Sobic001G195100 Sobic005G080200--Sobic006G246100 Sobic001G432700 Sobic001G432700 Sobic005G080200--Sobic001G432700 Sobic001G192600 Sobic001G192600 Sobic005G080200--Sobic001G192600 Sobic005G080200--Sobic001G195100 Sobic005G080200--Sobic010G194300 Sobic003G037500 Sobic003G037500 Sobic005G080200--Sobic003G037500 Sobic003G417350 Sobic003G417350 Sobic005G080200--Sobic003G417350 Sobic010G075600 Sobic010G075600 Sobic005G080200--Sobic010G075600 Sobic001G319200 Sobic001G319200 Sobic005G080200--Sobic001G319200 Sobic010G194300--Sobic006G246100 Sobic010G194300--Sobic005G080200 Sobic010G194300--Sobic004G010300 Sobic003G285500 Sobic003G285500 Sobic010G194300--Sobic003G285500 Sobic010G194300--Sobic003G296300 Sobic010G194300--Sobic003G037500 Sobic009G065300 Sobic009G065300 Sobic010G194300--Sobic009G065300 Sobic006G047000 Sobic006G047000 Sobic010G194300--Sobic006G047000 Sobic010G250600 Sobic010G250600 Sobic010G194300--Sobic010G250600 Sobic007G025500 Sobic007G025500 Sobic002G319100--Sobic007G025500 Sobic008G113000 Sobic008G113000 Sobic002G319100--Sobic008G113000 Sobic003G162700 Sobic003G162700 Sobic002G319100--Sobic003G162700 Sobic001G339801 Sobic001G339801 Sobic002G319100--Sobic001G339801 Sobic001G091600 Sobic001G091600 Sobic002G319100--Sobic001G091600 Sobic003G078100 Sobic003G078100 Sobic002G319100--Sobic003G078100 Sobic007G187800 Sobic007G187800 Sobic002G319100--Sobic007G187800 Sobic003G041600 Sobic003G041600 Sobic002G319100--Sobic003G041600 Sobic002G319100--Sobic006G246100 Sobic001G345400--Sobic003G296300 Sobic001G345400--Sobic004G101000 Sobic001G345400--Sobic009G038000 Sobic005G155600 Sobic005G155600 Sobic001G345400--Sobic005G155600 Sobic001G345400--Sobic006G246100 Sobic004G333300 Sobic004G333300 Sobic001G345400--Sobic004G333300 Sobic001G530350 Sobic001G530350 Sobic001G345400--Sobic001G530350 Sobic009G192100 Sobic009G192100 Sobic001G345400--Sobic009G192100 Sobic008G038100 Sobic008G038100 Sobic001G345400--Sobic008G038100 Sobic004G114400--Sobic006G246100 Sobic008G181300 Sobic008G181300 Sobic004G114400--Sobic008G181300 Sobic006G113000 Sobic006G113000 Sobic004G114400--Sobic006G113000 Sobic004G114400--Sobic003G296300 Sobic004G114400--Sobic009G192100 Sobic001G061101 Sobic001G061101 Sobic004G114400--Sobic001G061101 Sobic004G114400--Sobic001G195100 Sobic005G000100 Sobic005G000100 Sobic004G114400--Sobic005G000100 Sobic004G114400--Sobic004G195000 Sobic003G277500 Sobic003G277500 Sobic004G010300--Sobic003G277500 Sobic001G536500 Sobic001G536500 Sobic004G010300--Sobic001G536500 Sobic004G010300--Sobic009G065300 Sobic002G070200 Sobic002G070200 Sobic004G010300--Sobic002G070200 Sobic004G186500 Sobic004G186500 Sobic004G010300--Sobic004G186500 Sobic004G010300--Sobic003G162700 Sobic009G230100 Sobic009G230100 Sobic004G010300--Sobic009G230100 Sobic006G044932 Sobic006G044932 Sobic004G010300--Sobic006G044932 Sobic004G010300--Sobic010G194300 Sobic009G131100 Sobic009G131100 Sobic010G194900--Sobic009G131100 Sobic005G228000 Sobic005G228000 Sobic010G194900--Sobic005G228000 Sobic003G135700 Sobic003G135700 Sobic010G194900--Sobic003G135700 Sobic009G094450 Sobic009G094450 Sobic010G194900--Sobic009G094450 Sobic010G194900--Sobic006G246100 Sobic010G194900--Sobic001G536500 Sobic010G194900--Sobic004G010300 Sobic004G014000 Sobic004G014000 Sobic010G194900--Sobic004G014000 Sobic004G352900 Sobic004G352900 Sobic010G194900--Sobic004G352900 Sobic004G195000--Sobic001G319200 Sobic004G195000--Sobic006G246100 Sobic004G195000--Sobic003G277500 Sobic004G195000--Sobic005G080200 Sobic004G195000--Sobic003G296300 Sobic002G407700 Sobic002G407700 Sobic004G195000--Sobic002G407700 Sobic001G403300 Sobic001G403300 Sobic004G195000--Sobic001G403300 Sobic002G377100 Sobic002G377100 Sobic004G195000--Sobic002G377100 Sobic004G195000--Sobic005G155600
Octagon: transcription factors


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