Gene annotation
Transcriptome id Sobic.003G360200.1
Synonym Sb03g040210, WOX5
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
homeobox domain containing protein, expressed
UniProt A0A1W0W0I4
Pfam PF00046
Panther DB PTHR24326 PTHR24326:SF295
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0003677; DNA binding


Orthologs (automatic annotation)
TAIR AT3G11260 : WUSCHEL related homeobox 5
RAP-DB (Rice) LOC_Os01g63510.1 : homeobox domain containing protein, expressed
MaizeGDB (Corn) Zm00025a040785 , Zm00025a009417 , Zm00025a026819 , Zm00025a012986 , Zm00025a057205 , Zm00025a039612 , Zm00025a026917
Brachypodium KQJ85141 , KQJ84981 , KQJ92701 , KQK10633 , KQK07789
Barley HORVU1Hr1G010580.3 , HORVU1Hr1G010580.2 , HORVU1Hr1G010580.1 , HORVU3Hr1G085050.1 , HORVU3Hr1G085050.3 , HORVU3Hr1G085050.2 , HORVU3Hr1G085050.4 , HORVU3Hr1G086450.1 , HORVU5Hr1G049190.2 , HORVU5Hr1G049190.3 , HORVU5Hr1G049190.1 , HORVU5Hr1G022120.1 , HORVU2Hr1G113820.8 , HORVU2Hr1G113820.2 , HORVU2Hr1G113820.5 , HORVU2Hr1G113820.4 , HORVU2Hr1G113820.7
Wheat TraesCS5D02G097400 , TraesCS3D02G352500 , TraesCS1B02G069000 , TraesCS3B02G399800 , TraesCS2D02G515600 , TraesCS2A02G514000 , TraesCS1D02G054000 , TraesCS5A02G085000 , TraesCS3D02G361100 , TraesCS3B02G391100 , TraesCS2B02G542600 , TraesCS5D02G162600 , TraesCS3A02G368100 , TraesCS3A02G358200 , TraesCS5B02G156400 , TraesCS1A02G052000 , TraesCS3D02G352600 , TraesCS2A02G491900 , TraesCS5A02G157300 , TraesCS5B02G091000
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G127100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@oxidoreductase, 2OG-FeII oxygenase domain containing protein, putative, expressed -
2 Sobic.006G009000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@zinc finger family protein, putative, expressed -
3 Sobic.009G065300 expressed protein -
4 Sobic.003G416300 glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
5 Sobic.001G432700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
6 Sobic.006G246100 one cut domain family member 3, putative, expressed -
7 Sobic.002G327300 expressed protein -
8 Sobic.007G115500 plant protein of unknown function domain containing protein, expressed -
9 Sobic.003G135700 - -
10 Sobic.009G054100 GDSL-like lipase/acylhydrolase, putative, expressed -
11 Sobic.003G280400 hexokinase, putative, expressed K00844: hexokinase
12 Sobic.006G068800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@hydrolase, alpha/beta fold family protein, putative, expressed -
13 Sobic.003G037500 WRKY107, expressed -
14 Sobic.004G192100 uncharacterized Cys-rich domain containing protein, putative, expressed -
15 Sobic.004G202400 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@high affinity nitrate transporter, putative, expressed -
16 Sobic.006G125100 ubiquitin family protein, putative, expressed -
17 Sobic.003G228200 cytochrome P450 72A1, putative, expressed -
18 Sobic.003G157600 expressed protein -
19 Sobic.010G192900 expressed protein -
20 Sobic.004G249000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -


Gene co-expression network
sample Sobic003G360200 Sobic003G360200 Sobic007G127100 Sobic007G127100 Sobic003G360200--Sobic007G127100 Sobic006G009000 Sobic006G009000 Sobic003G360200--Sobic006G009000 Sobic009G065300 Sobic009G065300 Sobic003G360200--Sobic009G065300 Sobic003G416300 Sobic003G416300 Sobic003G360200--Sobic003G416300 Sobic001G432700 Sobic001G432700 Sobic003G360200--Sobic001G432700 Sobic006G246100 Sobic006G246100 Sobic003G360200--Sobic006G246100 Sobic002G327300 Sobic002G327300 Sobic003G360200--Sobic002G327300 Sobic007G115500 Sobic007G115500 Sobic003G360200--Sobic007G115500 Sobic003G135700 Sobic003G135700 Sobic003G360200--Sobic003G135700 Sobic007G127100--Sobic003G416300 Sobic007G127100--Sobic002G327300 Sobic010G008400 Sobic010G008400 Sobic007G127100--Sobic010G008400 Sobic008G128900 Sobic008G128900 Sobic007G127100--Sobic008G128900 Sobic007G127100--Sobic009G065300 Sobic007G127100--Sobic001G432700 Sobic002G407100 Sobic002G407100 Sobic007G127100--Sobic002G407100 Sobic004G064400 Sobic004G064400 Sobic007G127100--Sobic004G064400 Sobic009G121900 Sobic009G121900 Sobic007G127100--Sobic009G121900 Sobic006G009100 Sobic006G009100 Sobic006G009000--Sobic006G009100 Sobic010G192900 Sobic010G192900 Sobic006G009000--Sobic010G192900 Sobic002G327100 Sobic002G327100 Sobic006G009000--Sobic002G327100 Sobic006G009000--Sobic009G065300 Sobic006G255400 Sobic006G255400 Sobic006G009000--Sobic006G255400 Sobic006G009000--Sobic007G127100 Sobic006G050800 Sobic006G050800 Sobic006G009000--Sobic006G050800 Sobic006G068800 Sobic006G068800 Sobic006G009000--Sobic006G068800 Sobic006G009000--Sobic003G360200 Sobic009G065300--Sobic002G327300 Sobic001G234800 Sobic001G234800 Sobic009G065300--Sobic001G234800 Sobic009G065300--Sobic002G327100 Sobic003G228200 Sobic003G228200 Sobic009G065300--Sobic003G228200 Sobic009G065300--Sobic003G416300 Sobic003G037500 Sobic003G037500 Sobic009G065300--Sobic003G037500 Sobic009G065300--Sobic007G127100 Sobic001G318500 Sobic001G318500 Sobic009G065300--Sobic001G318500 Sobic002G302500 Sobic002G302500 Sobic009G065300--Sobic002G302500 Sobic005G168800 Sobic005G168800 Sobic003G416300--Sobic005G168800 Sobic003G416300--Sobic002G327300 Sobic004G046200 Sobic004G046200 Sobic003G416300--Sobic004G046200 Sobic003G050200 Sobic003G050200 Sobic003G416300--Sobic003G050200 Sobic002G312900 Sobic002G312900 Sobic003G416300--Sobic002G312900 Sobic003G416300--Sobic007G127100 Sobic003G079400 Sobic003G079400 Sobic003G416300--Sobic003G079400 Sobic008G106700 Sobic008G106700 Sobic003G416300--Sobic008G106700 Sobic001G082600 Sobic001G082600 Sobic003G416300--Sobic001G082600 Sobic001G432700--Sobic002G407100 Sobic001G432700--Sobic007G127100 Sobic001G403300 Sobic001G403300 Sobic001G432700--Sobic001G403300 Sobic001G432700--Sobic006G068800 Sobic001G432700--Sobic009G065300 Sobic010G195500 Sobic010G195500 Sobic001G432700--Sobic010G195500 Sobic005G080200 Sobic005G080200 Sobic001G432700--Sobic005G080200 Sobic001G432700--Sobic002G327300 Sobic004G302200 Sobic004G302200 Sobic001G432700--Sobic004G302200 Sobic003G296300 Sobic003G296300 Sobic006G246100--Sobic003G296300 Sobic006G246100--Sobic005G080200 Sobic010G194300 Sobic010G194300 Sobic006G246100--Sobic010G194300 Sobic002G319100 Sobic002G319100 Sobic006G246100--Sobic002G319100 Sobic001G345400 Sobic001G345400 Sobic006G246100--Sobic001G345400 Sobic004G114400 Sobic004G114400 Sobic006G246100--Sobic004G114400 Sobic004G010300 Sobic004G010300 Sobic006G246100--Sobic004G010300 Sobic010G194900 Sobic010G194900 Sobic006G246100--Sobic010G194900 Sobic004G195000 Sobic004G195000 Sobic006G246100--Sobic004G195000 Sobic002G327300--Sobic010G008400 Sobic003G264600 Sobic003G264600 Sobic002G327300--Sobic003G264600 Sobic002G327300--Sobic004G046200 Sobic003G084400 Sobic003G084400 Sobic002G327300--Sobic003G084400 Sobic002G327300--Sobic003G228200 Sobic003G319500 Sobic003G319500 Sobic002G327300--Sobic003G319500 Sobic002G327300--Sobic002G327100 Sobic001G500000 Sobic001G500000 Sobic002G327300--Sobic001G500000 Sobic002G017800 Sobic002G017800 Sobic002G327300--Sobic002G017800 Sobic007G115500--Sobic003G228200 Sobic007G115500--Sobic002G327300 Sobic001G318200 Sobic001G318200 Sobic007G115500--Sobic001G318200 Sobic007G115500--Sobic007G127100 Sobic002G024000 Sobic002G024000 Sobic007G115500--Sobic002G024000 Sobic007G115500--Sobic009G065300 Sobic007G115500--Sobic003G360200 Sobic003G192100 Sobic003G192100 Sobic007G115500--Sobic003G192100 Sobic007G115500--Sobic005G080200 Sobic010G268400 Sobic010G268400 Sobic003G135700--Sobic010G268400 Sobic003G135700--Sobic003G192100 Sobic007G025500 Sobic007G025500 Sobic003G135700--Sobic007G025500 Sobic010G136000 Sobic010G136000 Sobic003G135700--Sobic010G136000 Sobic002G082600 Sobic002G082600 Sobic003G135700--Sobic002G082600 Sobic001G107400 Sobic001G107400 Sobic003G135700--Sobic001G107400 Sobic002G373001 Sobic002G373001 Sobic003G135700--Sobic002G373001 Sobic008G032100 Sobic008G032100 Sobic003G135700--Sobic008G032100 Sobic002G312400 Sobic002G312400 Sobic003G135700--Sobic002G312400
Octagon: transcription factors


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