Gene annotation
Transcriptome id Sobic.003G037500.1
Synonym WRKY72, Sb03g003370, ATWRKY72
Functional annotation WRKY107, expressed
UniProt C5XM16
Pfam PF03106
Panther DB PTHR31429 PTHR31429:SF15
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0006355; regulation of transcription, DNA-templated GO:0003700DNA-binding transcription factor activity


Orthologs (automatic annotation)
TAIR AT4G04450 : WRKY family transcription factor
RAP-DB (Rice) LOC_Os01g09080.1 : WRKY107, expressed
MaizeGDB (Corn) Zm00025a035790 , Zm00025a050047 , Zm00025a023096
Brachypodium KQK19880 , KQK03088
Barley HORVU7Hr1G021260.1 , HORVU7Hr1G021260.2 , HORVU7Hr1G021260.3 , HORVU7Hr1G021260.4 , HORVU7Hr1G021260.6 , HORVU3Hr1G020210.2 , HORVU3Hr1G020210.3 , HORVU3Hr1G020210.1 , HORVU3Hr1G020210.4 , HORVU6Hr1G079710.1 , HORVU6Hr1G079710.2
Wheat TraesCS6A02G326500 , TraesCS6A02G326500 , TraesCS7D02G092600 , TraesCS3B02G130000 , TraesCS3B02G130000 , TraesCS6B02G357600 , TraesCS3D02G113300 , TraesCS6D02G306300
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G285500 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@WRKY14, expressed -
2 Sobic.003G192100 expressed protein -
3 Sobic.001G367600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
4 Sobic.001G231700 oxidoreductase, short chain dehydrogenase/reductase family domain containing protein, expressed K00059: fabG, 3-oxoacyl-[acyl-carrier protein] reductase
5 Sobic.004G245100 immediate-early fungal elicitor protein CMPG1, putative, expressed -
6 Sobic.002G353900 "Belonging to the Sdw3 locus, Sbi_sdw3"(PubMedID : 20464438)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@transporter family protein, putative, expressed -
7 Sobic.003G228200 cytochrome P450 72A1, putative, expressed -
8 Sobic.007G155000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@bifunctional monodehydroascorbate reductase and carbonic anhydrasenectarin-3 precursor, putative, expressed K01674: carbonic anhydrase
9 Sobic.001G304100 LTPL144 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
10 Sobic.002G017800 expressed protein -
11 Sobic.001G192600 mitochondrial import inner membrane translocase subunit Tim17, putative, expressed K17794: mitochondrial import inner membrane translocase subunit TIM23
12 Sobic.006G234800 expressed protein -
13 Sobic.009G221400 B3 DNA binding domain containing protein, expressed K09287: RAV-like factor
14 Sobic.001G318500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
15 Sobic.002G192000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@AN1-like zinc finger domain containing protein, expressed -
16 Sobic.006G216700 "domain confirmed by Pfam database, expression not supported"(PubMedID : 20499123)@expressed protein -
17 Sobic.010G270500 GDSL-like lipase/acylhydrolase, putative, expressed -
18 Sobic.009G111000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pectinesterase, putative, expressed K01051: pectinesterase
19 Sobic.002G327300 expressed protein -
20 Sobic.001G238400 expansin precursor, putative, expressed -


Gene co-expression network
sample Sobic003G037500 Sobic003G037500 Sobic003G285500 Sobic003G285500 Sobic003G037500--Sobic003G285500 Sobic003G192100 Sobic003G192100 Sobic003G037500--Sobic003G192100 Sobic001G367600 Sobic001G367600 Sobic003G037500--Sobic001G367600 Sobic001G231700 Sobic001G231700 Sobic003G037500--Sobic001G231700 Sobic004G245100 Sobic004G245100 Sobic003G037500--Sobic004G245100 Sobic002G353900 Sobic002G353900 Sobic003G037500--Sobic002G353900 Sobic003G228200 Sobic003G228200 Sobic003G037500--Sobic003G228200 Sobic007G155000 Sobic007G155000 Sobic003G037500--Sobic007G155000 Sobic001G304100 Sobic001G304100 Sobic003G037500--Sobic001G304100 Sobic003G285500--Sobic003G037500 Sobic009G221400 Sobic009G221400 Sobic003G285500--Sobic009G221400 Sobic003G285500--Sobic002G353900 Sobic003G285500--Sobic007G155000 Sobic003G041200 Sobic003G041200 Sobic003G285500--Sobic003G041200 Sobic003G285500--Sobic001G367600 Sobic003G285500--Sobic003G192100 Sobic004G101300 Sobic004G101300 Sobic003G285500--Sobic004G101300 Sobic003G285500--Sobic001G231700 Sobic005G018700 Sobic005G018700 Sobic003G192100--Sobic005G018700 Sobic003G192100--Sobic004G101300 Sobic003G192100--Sobic003G037500 Sobic003G192100--Sobic007G155000 Sobic002G245100 Sobic002G245100 Sobic003G192100--Sobic002G245100 Sobic003G192100--Sobic001G231700 Sobic001G050100 Sobic001G050100 Sobic003G192100--Sobic001G050100 Sobic003G192100--Sobic001G367600 Sobic004G340900 Sobic004G340900 Sobic003G192100--Sobic004G340900 Sobic002G192000 Sobic002G192000 Sobic001G367600--Sobic002G192000 Sobic001G140900 Sobic001G140900 Sobic001G367600--Sobic001G140900 Sobic001G038900 Sobic001G038900 Sobic001G367600--Sobic001G038900 Sobic001G367600--Sobic001G231700 Sobic002G017800 Sobic002G017800 Sobic001G367600--Sobic002G017800 Sobic004G100700 Sobic004G100700 Sobic001G367600--Sobic004G100700 Sobic006G103000 Sobic006G103000 Sobic001G367600--Sobic006G103000 Sobic002G055700 Sobic002G055700 Sobic001G367600--Sobic002G055700 Sobic001G367600--Sobic002G353900 Sobic006G277600 Sobic006G277600 Sobic001G231700--Sobic006G277600 Sobic001G402200 Sobic001G402200 Sobic001G231700--Sobic001G402200 Sobic001G231700--Sobic001G367600 Sobic001G231700--Sobic006G103000 Sobic009G240600 Sobic009G240600 Sobic001G231700--Sobic009G240600 Sobic006G234800 Sobic006G234800 Sobic001G231700--Sobic006G234800 Sobic001G481400 Sobic001G481400 Sobic001G231700--Sobic001G481400 Sobic001G500000 Sobic001G500000 Sobic001G231700--Sobic001G500000 Sobic002G188900 Sobic002G188900 Sobic001G231700--Sobic002G188900 Sobic004G245100--Sobic003G037500 Sobic006G268800 Sobic006G268800 Sobic004G245100--Sobic006G268800 Sobic001G318500 Sobic001G318500 Sobic004G245100--Sobic001G318500 Sobic009G145500 Sobic009G145500 Sobic004G245100--Sobic009G145500 Sobic004G245100--Sobic003G228200 Sobic003G007600 Sobic003G007600 Sobic004G245100--Sobic003G007600 Sobic003G073380 Sobic003G073380 Sobic004G245100--Sobic003G073380 Sobic008G027600 Sobic008G027600 Sobic004G245100--Sobic008G027600 Sobic003G043600 Sobic003G043600 Sobic004G245100--Sobic003G043600 Sobic002G353900--Sobic002G055700 Sobic003G382600 Sobic003G382600 Sobic002G353900--Sobic003G382600 Sobic002G353900--Sobic001G367600 Sobic002G302500 Sobic002G302500 Sobic002G353900--Sobic002G302500 Sobic002G353900--Sobic002G192000 Sobic002G353900--Sobic009G221400 Sobic009G139400 Sobic009G139400 Sobic002G353900--Sobic009G139400 Sobic006G158600 Sobic006G158600 Sobic002G353900--Sobic006G158600 Sobic009G234100 Sobic009G234100 Sobic002G353900--Sobic009G234100 Sobic002G327300 Sobic002G327300 Sobic003G228200--Sobic002G327300 Sobic003G264600 Sobic003G264600 Sobic003G228200--Sobic003G264600 Sobic003G228200--Sobic001G318500 Sobic002G327100 Sobic002G327100 Sobic003G228200--Sobic002G327100 Sobic003G228200--Sobic003G037500 Sobic006G158400 Sobic006G158400 Sobic003G228200--Sobic006G158400 Sobic003G228200--Sobic004G245100 Sobic003G228200--Sobic003G192100 Sobic010G270500 Sobic010G270500 Sobic003G228200--Sobic010G270500 Sobic001G435000 Sobic001G435000 Sobic007G155000--Sobic001G435000 Sobic004G208700 Sobic004G208700 Sobic007G155000--Sobic004G208700 Sobic007G155000--Sobic009G234100 Sobic009G159400 Sobic009G159400 Sobic007G155000--Sobic009G159400 Sobic002G140400 Sobic002G140400 Sobic007G155000--Sobic002G140400 Sobic004G229800 Sobic004G229800 Sobic007G155000--Sobic004G229800 Sobic007G155000--Sobic001G038900 Sobic010G066700 Sobic010G066700 Sobic007G155000--Sobic010G066700 Sobic010G259600 Sobic010G259600 Sobic007G155000--Sobic010G259600 Sobic009G188000 Sobic009G188000 Sobic001G304100--Sobic009G188000 Sobic001G238400 Sobic001G238400 Sobic001G304100--Sobic001G238400 Sobic001G302600 Sobic001G302600 Sobic001G304100--Sobic001G302600 Sobic002G213600 Sobic002G213600 Sobic001G304100--Sobic002G213600 Sobic003G084400 Sobic003G084400 Sobic001G304100--Sobic003G084400 Sobic001G313600 Sobic001G313600 Sobic001G304100--Sobic001G313600 Sobic005G107900 Sobic005G107900 Sobic001G304100--Sobic005G107900 Sobic003G417200 Sobic003G417200 Sobic001G304100--Sobic003G417200 Sobic001G304100--Sobic006G234800
Octagon: transcription factors


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