Gene annotation
Transcriptome id Sobic.001G432700.1
Synonym Sb01g040710
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
expressed protein
UniProt C5WQU5
Pfam PF13962
Panther DB PTHR24177 PTHR24177:SF60
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os03g15080.1 : expressed protein
MaizeGDB (Corn) Zm00025a001648 , Zm00025a001645
Brachypodium -
Barley HORVU4Hr1G062330.1 , HORVU4Hr1G062330.2
Wheat -
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G407100 expressed protein -
2 Sobic.007G127100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@oxidoreductase, 2OG-FeII oxygenase domain containing protein, putative, expressed -
3 Sobic.001G403300 cyclase/dehydrase family protein, putative, expressed K14496: abscisic acid receptor PYR/PYL family
4 Sobic.006G068800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@hydrolase, alpha/beta fold family protein, putative, expressed -
5 Sobic.009G065300 expressed protein -
6 Sobic.010G195500 reductase, putative, expressed -
7 Sobic.005G080200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Ser/Thr protein phosphatase family protein, putative, expressed -
8 Sobic.002G327300 expressed protein -
9 Sobic.004G302200 "domain confirmed by Pfam database, expression supported by NCBI EST database"(PubMedID : 20499123)@SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@OsSAUR11 - Auxin-responsive SAUR gene family member, expressed K14488: SAUR family protein
10 Sobic.010G192900 expressed protein -
11 Sobic.009G033300 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@peroxidase precursor, putative, expressed K00430: peroxidase
12 Sobic.009G121900 Annexin arabidopsis 4(PubMedID : 26320239)@annexin, putative, expressed -
13 Sobic.002G003800 plastocyanin-like domain containing protein, putative, expressed -
14 Sobic.010G008400 bark storage protein A precursor, putative, expressed -
15 Sobic.003G037500 WRKY107, expressed -
16 Sobic.002G327100 expressed protein -
17 Sobic.002G250000 Protein dihydroflavonol-4-reductase DFR (Os)(PubMedID : 27208977)@dehydrogenase, putative, expressed -
18 Sobic.003G416300 glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
19 Sobic.003G384700 pectinacetylesterase domain containing protein, expressed -
20 Sobic.003G320800 peroxidase precursor, putative, expressed K00430: peroxidase


Gene co-expression network
sample Sobic001G432700 Sobic001G432700 Sobic002G407100 Sobic002G407100 Sobic001G432700--Sobic002G407100 Sobic007G127100 Sobic007G127100 Sobic001G432700--Sobic007G127100 Sobic001G403300 Sobic001G403300 Sobic001G432700--Sobic001G403300 Sobic006G068800 Sobic006G068800 Sobic001G432700--Sobic006G068800 Sobic009G065300 Sobic009G065300 Sobic001G432700--Sobic009G065300 Sobic010G195500 Sobic010G195500 Sobic001G432700--Sobic010G195500 Sobic005G080200 Sobic005G080200 Sobic001G432700--Sobic005G080200 Sobic002G327300 Sobic002G327300 Sobic001G432700--Sobic002G327300 Sobic004G302200 Sobic004G302200 Sobic001G432700--Sobic004G302200 Sobic001G397300 Sobic001G397300 Sobic002G407100--Sobic001G397300 Sobic007G178000 Sobic007G178000 Sobic002G407100--Sobic007G178000 Sobic009G121900 Sobic009G121900 Sobic002G407100--Sobic009G121900 Sobic002G407100--Sobic002G327300 Sobic002G250000 Sobic002G250000 Sobic002G407100--Sobic002G250000 Sobic002G407100--Sobic001G432700 Sobic007G006300 Sobic007G006300 Sobic002G407100--Sobic007G006300 Sobic002G327201 Sobic002G327201 Sobic002G407100--Sobic002G327201 Sobic009G074100 Sobic009G074100 Sobic002G407100--Sobic009G074100 Sobic003G416300 Sobic003G416300 Sobic007G127100--Sobic003G416300 Sobic007G127100--Sobic002G327300 Sobic010G008400 Sobic010G008400 Sobic007G127100--Sobic010G008400 Sobic008G128900 Sobic008G128900 Sobic007G127100--Sobic008G128900 Sobic007G127100--Sobic009G065300 Sobic007G127100--Sobic001G432700 Sobic007G127100--Sobic002G407100 Sobic004G064400 Sobic004G064400 Sobic007G127100--Sobic004G064400 Sobic007G127100--Sobic009G121900 Sobic001G403300--Sobic001G432700 Sobic004G195000 Sobic004G195000 Sobic001G403300--Sobic004G195000 Sobic001G403300--Sobic010G195500 Sobic001G403300--Sobic006G068800 Sobic004G207200 Sobic004G207200 Sobic001G403300--Sobic004G207200 Sobic001G403300--Sobic005G080200 Sobic003G135700 Sobic003G135700 Sobic001G403300--Sobic003G135700 Sobic001G403300--Sobic009G065300 Sobic003G384700 Sobic003G384700 Sobic001G403300--Sobic003G384700 Sobic010G192900 Sobic010G192900 Sobic006G068800--Sobic010G192900 Sobic002G327100 Sobic002G327100 Sobic006G068800--Sobic002G327100 Sobic001G395800 Sobic001G395800 Sobic006G068800--Sobic001G395800 Sobic004G297900 Sobic004G297900 Sobic006G068800--Sobic004G297900 Sobic003G311800 Sobic003G311800 Sobic006G068800--Sobic003G311800 Sobic003G037500 Sobic003G037500 Sobic006G068800--Sobic003G037500 Sobic005G073000 Sobic005G073000 Sobic006G068800--Sobic005G073000 Sobic003G411200 Sobic003G411200 Sobic006G068800--Sobic003G411200 Sobic001G416200 Sobic001G416200 Sobic006G068800--Sobic001G416200 Sobic009G065300--Sobic002G327300 Sobic001G234800 Sobic001G234800 Sobic009G065300--Sobic001G234800 Sobic009G065300--Sobic002G327100 Sobic003G228200 Sobic003G228200 Sobic009G065300--Sobic003G228200 Sobic009G065300--Sobic003G416300 Sobic009G065300--Sobic003G037500 Sobic009G065300--Sobic007G127100 Sobic001G318500 Sobic001G318500 Sobic009G065300--Sobic001G318500 Sobic002G302500 Sobic002G302500 Sobic009G065300--Sobic002G302500 Sobic005G093000 Sobic005G093000 Sobic010G195500--Sobic005G093000 Sobic002G312900 Sobic002G312900 Sobic010G195500--Sobic002G312900 Sobic002G329000 Sobic002G329000 Sobic010G195500--Sobic002G329000 Sobic010G268400 Sobic010G268400 Sobic010G195500--Sobic010G268400 Sobic010G195500--Sobic010G008400 Sobic001G147900 Sobic001G147900 Sobic010G195500--Sobic001G147900 Sobic004G062500 Sobic004G062500 Sobic010G195500--Sobic004G062500 Sobic010G239500 Sobic010G239500 Sobic010G195500--Sobic010G239500 Sobic004G101300 Sobic004G101300 Sobic010G195500--Sobic004G101300 Sobic006G246100 Sobic006G246100 Sobic005G080200--Sobic006G246100 Sobic005G080200--Sobic001G432700 Sobic001G192600 Sobic001G192600 Sobic005G080200--Sobic001G192600 Sobic001G195100 Sobic001G195100 Sobic005G080200--Sobic001G195100 Sobic010G194300 Sobic010G194300 Sobic005G080200--Sobic010G194300 Sobic005G080200--Sobic003G037500 Sobic003G417350 Sobic003G417350 Sobic005G080200--Sobic003G417350 Sobic010G075600 Sobic010G075600 Sobic005G080200--Sobic010G075600 Sobic001G319200 Sobic001G319200 Sobic005G080200--Sobic001G319200 Sobic002G327300--Sobic010G008400 Sobic003G264600 Sobic003G264600 Sobic002G327300--Sobic003G264600 Sobic004G046200 Sobic004G046200 Sobic002G327300--Sobic004G046200 Sobic003G084400 Sobic003G084400 Sobic002G327300--Sobic003G084400 Sobic002G327300--Sobic003G228200 Sobic003G319500 Sobic003G319500 Sobic002G327300--Sobic003G319500 Sobic002G327300--Sobic002G327100 Sobic001G500000 Sobic001G500000 Sobic002G327300--Sobic001G500000 Sobic002G017800 Sobic002G017800 Sobic002G327300--Sobic002G017800 Sobic010G136000 Sobic010G136000 Sobic004G302200--Sobic010G136000 Sobic003G320800 Sobic003G320800 Sobic004G302200--Sobic003G320800 Sobic004G302200--Sobic010G268400 Sobic004G302200--Sobic001G432700 Sobic004G302200--Sobic003G135700 Sobic004G302200--Sobic002G407100 Sobic002G319500 Sobic002G319500 Sobic004G302200--Sobic002G319500 Sobic002G373001 Sobic002G373001 Sobic004G302200--Sobic002G373001 Sobic004G302200--Sobic009G065300
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.