Gene annotation
Transcriptome id Sobic.006G068800.1
Synonym Sb06g015550
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
hydrolase, alpha/beta fold family protein, putative, expressed
UniProt C5YFU7
Pfam PF12695
Panther DB PTHR10992 PTHR10992:SF819
NCBI CDD KOG1454; Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily)
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G36290 : alpha/beta-Hydrolases superfamily protein
RAP-DB (Rice) LOC_Os04g33590.1 : hydrolase, alpha/beta fold family protein, putative, expressed
MaizeGDB (Corn) Zm00025a011527 , Zm00025a020539 , Zm00025a011529
Brachypodium PNT61024 , PNT61023 , KQJ82504 , KQJ82503 , KQJ99723 , KQJ99724
Barley HORVU1Hr1G074380.9 , HORVU1Hr1G074380.8 , HORVU1Hr1G074380.7 , HORVU1Hr1G074380.6 , HORVU1Hr1G074380.5 , HORVU1Hr1G074380.4 , HORVU1Hr1G074380.3 , HORVU1Hr1G074380.23 , HORVU1Hr1G074380.20 , HORVU1Hr1G074380.21 , HORVU1Hr1G074380.22 , HORVU1Hr1G024040.1 , HORVU2Hr1G072830.4 , HORVU2Hr1G072830.5 , HORVU2Hr1G072830.6 , HORVU2Hr1G072830.1 , HORVU2Hr1G072830.2 , HORVU2Hr1G072830.3 , HORVU6Hr1G033060.1 , HORVU7Hr1G050150.2 , HORVU1Hr1G074380.17 , HORVU1Hr1G074380.16 , HORVU1Hr1G074380.15 , HORVU1Hr1G074380.14 , HORVU1Hr1G074380.12 , HORVU1Hr1G074380.11 , HORVU6Hr1G033060.2 , HORVU1Hr1G074380.19 , HORVU1Hr1G074380.18 , HORVU6Hr1G033060.3 , HORVU6Hr1G033060.8 , HORVU6Hr1G033060.4 , HORVU6Hr1G033060.5 , HORVU6Hr1G033060.6 , HORVU6Hr1G033060.7
Wheat TraesCS6D02G152300 , TraesCS2A02G294400 , TraesCS2B02G310800 , TraesCS1A02G268900 , TraesCS2D02G292100 , TraesCS6A02G160400 , TraesCS1D02G269000 , TraesCS6B02G191000
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G192900 expressed protein -
2 Sobic.002G327100 expressed protein -
3 Sobic.001G395800 SMP-30/Gluconolaconase/LRE domain protein, putative, expressed -
4 Sobic.004G297900 plastocyanin-like domain containing protein, putative, expressed -
5 Sobic.003G311800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@xylosyltransferase, putative, expressed -
6 Sobic.003G037500 WRKY107, expressed -
7 Sobic.005G073000 stress responsive protein, putative, expressed -
8 Sobic.003G411200 CRAL/TRIO domain containing protein, expressed -
9 Sobic.001G416200 Responsive to hight light 41(PubMedID : 26320239)@ZOS3-09 - C2H2 zinc finger protein, expressed -
10 Sobic.001G302600 LTPL147 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
11 Sobic.006G172550 - -
12 Sobic.001G238300 expansin precursor, putative, expressed -
13 Sobic.002G003800 plastocyanin-like domain containing protein, putative, expressed -
14 Sobic.009G065300 expressed protein -
15 Sobic.004G295100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@aquaporin protein, putative, expressed K09873: aquaporin TIP
16 Sobic.002G261500 AIR12, putative, expressed -
17 Sobic.001G304100 LTPL144 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
18 Sobic.003G285500 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@WRKY14, expressed -
19 Sobic.007G090469 - -
20 Sobic.001G049900 UDP-rhamnose rhamnosyltransferase, putative, expressed -


Gene co-expression network
sample Sobic006G068800 Sobic006G068800 Sobic010G192900 Sobic010G192900 Sobic006G068800--Sobic010G192900 Sobic002G327100 Sobic002G327100 Sobic006G068800--Sobic002G327100 Sobic001G395800 Sobic001G395800 Sobic006G068800--Sobic001G395800 Sobic004G297900 Sobic004G297900 Sobic006G068800--Sobic004G297900 Sobic003G311800 Sobic003G311800 Sobic006G068800--Sobic003G311800 Sobic003G037500 Sobic003G037500 Sobic006G068800--Sobic003G037500 Sobic005G073000 Sobic005G073000 Sobic006G068800--Sobic005G073000 Sobic003G411200 Sobic003G411200 Sobic006G068800--Sobic003G411200 Sobic001G416200 Sobic001G416200 Sobic006G068800--Sobic001G416200 Sobic010G192900--Sobic006G068800 Sobic010G192900--Sobic002G327100 Sobic010G192900--Sobic003G037500 Sobic010G192900--Sobic004G297900 Sobic006G009000 Sobic006G009000 Sobic010G192900--Sobic006G009000 Sobic006G009100 Sobic006G009100 Sobic010G192900--Sobic006G009100 Sobic003G228200 Sobic003G228200 Sobic010G192900--Sobic003G228200 Sobic006G255400 Sobic006G255400 Sobic010G192900--Sobic006G255400 Sobic010G192900--Sobic003G311800 Sobic004G295100 Sobic004G295100 Sobic002G327100--Sobic004G295100 Sobic008G009400 Sobic008G009400 Sobic002G327100--Sobic008G009400 Sobic002G327100--Sobic006G009100 Sobic002G327100--Sobic003G228200 Sobic002G327300 Sobic002G327300 Sobic002G327100--Sobic002G327300 Sobic001G330300 Sobic001G330300 Sobic002G327100--Sobic001G330300 Sobic002G327100--Sobic003G311800 Sobic002G176100 Sobic002G176100 Sobic002G327100--Sobic002G176100 Sobic003G299300 Sobic003G299300 Sobic002G327100--Sobic003G299300 Sobic001G395800--Sobic003G311800 Sobic010G212500 Sobic010G212500 Sobic001G395800--Sobic010G212500 Sobic004G042000 Sobic004G042000 Sobic001G395800--Sobic004G042000 Sobic003G399600 Sobic003G399600 Sobic001G395800--Sobic003G399600 Sobic001G395800--Sobic004G297900 Sobic002G003800 Sobic002G003800 Sobic001G395800--Sobic002G003800 Sobic001G264000 Sobic001G264000 Sobic001G395800--Sobic001G264000 Sobic003G269600 Sobic003G269600 Sobic001G395800--Sobic003G269600 Sobic006G197100 Sobic006G197100 Sobic001G395800--Sobic006G197100 Sobic004G297900--Sobic003G311800 Sobic004G297900--Sobic008G009400 Sobic006G235200 Sobic006G235200 Sobic004G297900--Sobic006G235200 Sobic001G238300 Sobic001G238300 Sobic004G297900--Sobic001G238300 Sobic004G297900--Sobic004G295100 Sobic001G300500 Sobic001G300500 Sobic004G297900--Sobic001G300500 Sobic009G109000 Sobic009G109000 Sobic004G297900--Sobic009G109000 Sobic002G261500 Sobic002G261500 Sobic004G297900--Sobic002G261500 SobicK026900 SobicK026900 Sobic004G297900--SobicK026900 Sobic003G311800--Sobic004G297900 Sobic003G311800--Sobic002G003800 Sobic001G049900 Sobic001G049900 Sobic003G311800--Sobic001G049900 Sobic003G311800--Sobic009G109000 Sobic003G311800--Sobic006G197100 Sobic006G274933 Sobic006G274933 Sobic003G311800--Sobic006G274933 Sobic002G183700 Sobic002G183700 Sobic003G311800--Sobic002G183700 Sobic007G090469 Sobic007G090469 Sobic003G311800--Sobic007G090469 Sobic003G311800--Sobic004G042000 Sobic003G285500 Sobic003G285500 Sobic003G037500--Sobic003G285500 Sobic003G192100 Sobic003G192100 Sobic003G037500--Sobic003G192100 Sobic001G367600 Sobic001G367600 Sobic003G037500--Sobic001G367600 Sobic001G231700 Sobic001G231700 Sobic003G037500--Sobic001G231700 Sobic004G245100 Sobic004G245100 Sobic003G037500--Sobic004G245100 Sobic002G353900 Sobic002G353900 Sobic003G037500--Sobic002G353900 Sobic003G037500--Sobic003G228200 Sobic007G155000 Sobic007G155000 Sobic003G037500--Sobic007G155000 Sobic001G304100 Sobic001G304100 Sobic003G037500--Sobic001G304100 Sobic003G053300 Sobic003G053300 Sobic005G073000--Sobic003G053300 Sobic005G073000--Sobic004G297900 Sobic006G172550 Sobic006G172550 Sobic005G073000--Sobic006G172550 Sobic005G073000--Sobic001G238300 Sobic001G238400 Sobic001G238400 Sobic005G073000--Sobic001G238400 Sobic002G425000 Sobic002G425000 Sobic005G073000--Sobic002G425000 Sobic005G073000--Sobic001G304100 Sobic005G073000--Sobic002G261500 Sobic004G292900 Sobic004G292900 Sobic005G073000--Sobic004G292900 Sobic003G411200--Sobic003G311800 Sobic003G411200--Sobic004G297900 Sobic001G238800 Sobic001G238800 Sobic003G411200--Sobic001G238800 Sobic003G411200--Sobic009G109000 Sobic003G411200--Sobic002G183700 Sobic003G411200--Sobic001G300500 Sobic003G411200--Sobic001G049900 Sobic001G430100 Sobic001G430100 Sobic003G411200--Sobic001G430100 Sobic003G411200--Sobic006G235200 Sobic004G349125 Sobic004G349125 Sobic001G416200--Sobic004G349125 Sobic001G302600 Sobic001G302600 Sobic001G416200--Sobic001G302600 Sobic001G161500 Sobic001G161500 Sobic001G416200--Sobic001G161500 Sobic001G416200--Sobic006G197100 Sobic001G416200--Sobic004G042000 Sobic004G318700 Sobic004G318700 Sobic001G416200--Sobic004G318700 Sobic004G202400 Sobic004G202400 Sobic001G416200--Sobic004G202400 Sobic001G416200--Sobic002G003800 Sobic001G416200--Sobic001G304100
Octagon: transcription factors


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