Gene annotation
Transcriptome id Sobic.006G172550.1
Synonym -
Functional annotation -
UniProt C5YDJ3
Pfam PF14368
Panther DB PTHR31731 PTHR31731:SF7
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G12520 : Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
RAP-DB (Rice) LOC_Os04g46810.1 : LTPL120 - Protease inhibitor/seed storage/LTP family protein precursor, expressed
MaizeGDB (Corn) Zm00025a056849 , Zm00025a021411 , Zm00025a056854
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G172500 LTPL121 - Protease inhibitor/seed storage/LTP family protein precursor, putative, expressed -
2 Sobic.004G292900 LTPL112 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
3 Sobic.001G302600 LTPL147 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
4 Sobic.006G172601 - -
5 Sobic.004G297900 plastocyanin-like domain containing protein, putative, expressed -
6 Sobic.001G300500 expansin precursor, putative, expressed -
7 Sobic.005G073000 stress responsive protein, putative, expressed -
8 Sobic.004G295100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@aquaporin protein, putative, expressed K09873: aquaporin TIP
9 Sobic.003G311800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@xylosyltransferase, putative, expressed -
10 Sobic.006G235200 expressed protein -
11 Sobic.002G085900 expressed protein -
12 Sobic.003G399600 LTPL38 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
13 Sobic.001G112100 microtubule associated protein, putative, expressed K16732: protein regulator of cytokinesis 1
14 Sobic.001G304100 LTPL144 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
15 Sobic.007G090469 - -
16 Sobic.001G238300 expansin precursor, putative, expressed -
17 Sobic.003G399700 LTPL38 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
18 Sobic.008G009400 - -
19 Sobic.010G088800 cytokinin-O-glucosyltransferase 2, putative, expressed -
20 Sobic.006G225500 plastocyanin-like domain containing protein, putative, expressed -


Gene co-expression network
sample Sobic006G172550 Sobic006G172550 Sobic006G172500 Sobic006G172500 Sobic006G172550--Sobic006G172500 Sobic004G292900 Sobic004G292900 Sobic006G172550--Sobic004G292900 Sobic001G302600 Sobic001G302600 Sobic006G172550--Sobic001G302600 Sobic006G172601 Sobic006G172601 Sobic006G172550--Sobic006G172601 Sobic004G297900 Sobic004G297900 Sobic006G172550--Sobic004G297900 Sobic001G300500 Sobic001G300500 Sobic006G172550--Sobic001G300500 Sobic005G073000 Sobic005G073000 Sobic006G172550--Sobic005G073000 Sobic004G295100 Sobic004G295100 Sobic006G172550--Sobic004G295100 Sobic003G311800 Sobic003G311800 Sobic006G172550--Sobic003G311800 Sobic006G172500--Sobic006G172550 Sobic003G399600 Sobic003G399600 Sobic006G172500--Sobic003G399600 Sobic002G085900 Sobic002G085900 Sobic006G172500--Sobic002G085900 Sobic006G225500 Sobic006G225500 Sobic006G172500--Sobic006G225500 Sobic010G088800 Sobic010G088800 Sobic006G172500--Sobic010G088800 Sobic001G304201 Sobic001G304201 Sobic006G172500--Sobic001G304201 Sobic002G326500 Sobic002G326500 Sobic006G172500--Sobic002G326500 Sobic002G250000 Sobic002G250000 Sobic006G172500--Sobic002G250000 Sobic007G090460 Sobic007G090460 Sobic006G172500--Sobic007G090460 Sobic004G292900--Sobic006G172550 Sobic004G292900--Sobic001G302600 Sobic001G304100 Sobic001G304100 Sobic004G292900--Sobic001G304100 Sobic001G238400 Sobic001G238400 Sobic004G292900--Sobic001G238400 Sobic006G234800 Sobic006G234800 Sobic004G292900--Sobic006G234800 Sobic006G198700 Sobic006G198700 Sobic004G292900--Sobic006G198700 Sobic001G416200 Sobic001G416200 Sobic004G292900--Sobic001G416200 Sobic009G188000 Sobic009G188000 Sobic004G292900--Sobic009G188000 Sobic002G354200 Sobic002G354200 Sobic004G292900--Sobic002G354200 Sobic001G302600--Sobic001G416200 Sobic001G302600--Sobic001G304100 Sobic004G349125 Sobic004G349125 Sobic001G302600--Sobic004G349125 Sobic002G003800 Sobic002G003800 Sobic001G302600--Sobic002G003800 Sobic001G161500 Sobic001G161500 Sobic001G302600--Sobic001G161500 Sobic004G042000 Sobic004G042000 Sobic001G302600--Sobic004G042000 Sobic001G302600--Sobic001G304201 Sobic001G302600--Sobic004G292900 Sobic006G197100 Sobic006G197100 Sobic001G302600--Sobic006G197100 Sobic001G238300 Sobic001G238300 Sobic006G172601--Sobic001G238300 Sobic007G090469 Sobic007G090469 Sobic006G172601--Sobic007G090469 Sobic001G238200 Sobic001G238200 Sobic006G172601--Sobic001G238200 Sobic006G172601--Sobic006G172550 Sobic006G172601--Sobic006G225500 Sobic006G172601--Sobic004G297900 Sobic002G261500 Sobic002G261500 Sobic006G172601--Sobic002G261500 Sobic006G172601--Sobic001G300500 Sobic003G140700 Sobic003G140700 Sobic006G172601--Sobic003G140700 Sobic004G297900--Sobic003G311800 Sobic008G009400 Sobic008G009400 Sobic004G297900--Sobic008G009400 Sobic006G235200 Sobic006G235200 Sobic004G297900--Sobic006G235200 Sobic004G297900--Sobic001G238300 Sobic004G297900--Sobic004G295100 Sobic004G297900--Sobic001G300500 Sobic009G109000 Sobic009G109000 Sobic004G297900--Sobic009G109000 Sobic004G297900--Sobic002G261500 SobicK026900 SobicK026900 Sobic004G297900--SobicK026900 Sobic001G300500--Sobic004G297900 Sobic001G300500--Sobic003G311800 Sobic001G300500--Sobic004G295100 Sobic001G300500--Sobic007G090469 Sobic001G300500--Sobic006G172550 Sobic001G300500--Sobic006G235200 Sobic001G300500--Sobic001G238300 Sobic001G300500--Sobic006G172601 Sobic001G300500--SobicK026900 Sobic003G053300 Sobic003G053300 Sobic005G073000--Sobic003G053300 Sobic005G073000--Sobic004G297900 Sobic005G073000--Sobic006G172550 Sobic005G073000--Sobic001G238300 Sobic005G073000--Sobic001G238400 Sobic002G425000 Sobic002G425000 Sobic005G073000--Sobic002G425000 Sobic005G073000--Sobic001G304100 Sobic005G073000--Sobic002G261500 Sobic005G073000--Sobic004G292900 Sobic010G196000 Sobic010G196000 Sobic004G295100--Sobic010G196000 Sobic004G295100--Sobic004G297900 Sobic004G295100--Sobic008G009400 Sobic006G202600 Sobic006G202600 Sobic004G295100--Sobic006G202600 Sobic001G330300 Sobic001G330300 Sobic004G295100--Sobic001G330300 Sobic004G295100--Sobic003G311800 Sobic004G295100--Sobic006G235200 Sobic004G295100--Sobic001G300500 Sobic004G295100--Sobic007G090469 Sobic003G311800--Sobic004G297900 Sobic003G311800--Sobic002G003800 Sobic001G049900 Sobic001G049900 Sobic003G311800--Sobic001G049900 Sobic003G311800--Sobic009G109000 Sobic003G311800--Sobic006G197100 Sobic006G274933 Sobic006G274933 Sobic003G311800--Sobic006G274933 Sobic002G183700 Sobic002G183700 Sobic003G311800--Sobic002G183700 Sobic003G311800--Sobic007G090469 Sobic003G311800--Sobic004G042000
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.