Gene annotation
Transcriptome id Sobic.003G399700.1
Synonym Sb03g043610
Functional annotation LTPL38 - Protease inhibitor/seed storage/LTP family protein precursor, expressed
UniProt C5XG61
Pfam PF14368
Panther DB PTHR33122:SF11 PTHR33122
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G48490 : Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
RAP-DB (Rice) LOC_Os01g68580.1 : LTPL38 - Protease inhibitor/seed storage/LTP family protein precursor, expressed
MaizeGDB (Corn) Zm00025a039362 , Zm00025a026318
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G234400 white-brown complex homolog protein 11, putative, expressed -
2 Sobic.001G231900 glycine-rich cell wall structural protein 2 precursor, putative, expressed -
3 Sobic.006G172550 - -
4 Sobic.006G198700 MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
5 Sobic.004G292900 LTPL112 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
6 Sobic.006G172500 LTPL121 - Protease inhibitor/seed storage/LTP family protein precursor, putative, expressed -
7 Sobic.001G302600 LTPL147 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
8 Sobic.002G250000 Protein dihydroflavonol-4-reductase DFR (Os)(PubMedID : 27208977)@dehydrogenase, putative, expressed -
9 Sobic.002G219400 oxidoreductase/ transition metal ion binding protein, putative, expressed -
10 Sobic.003G405300 regulatory protein, putative, expressed -
11 Sobic.009G183900 ICE-like protease p20 domain containing protein, putative, expressed -
12 Sobic.001G487500 expressed protein -
13 Sobic.002G123500 dehydrodolichyl diphosphate synthase, putative, expressed K11778: DHDDS, RER2, ditrans,polycis-polyprenyl diphosphate synthase
14 Sobic.009G021600 Jacalin-like lectin domain containing protein, putative, expressed -
15 Sobic.010G088800 cytokinin-O-glucosyltransferase 2, putative, expressed -
16 Sobic.004G229400 phosphate-induced protein 1 conserved region domain containing protein, expressed -
17 Sobic.010G063033 - -
18 Sobic.005G110406 - K16223: protein FLOWERING LOCUS T
19 Sobic.001G256800 dirigent, putative, expressed -
20 Sobic.010G135100 expressed protein -


Gene co-expression network
sample Sobic003G399700 Sobic003G399700 Sobic002G234400 Sobic002G234400 Sobic003G399700--Sobic002G234400 Sobic001G231900 Sobic001G231900 Sobic003G399700--Sobic001G231900 Sobic006G172550 Sobic006G172550 Sobic003G399700--Sobic006G172550 Sobic006G198700 Sobic006G198700 Sobic003G399700--Sobic006G198700 Sobic004G292900 Sobic004G292900 Sobic003G399700--Sobic004G292900 Sobic006G172500 Sobic006G172500 Sobic003G399700--Sobic006G172500 Sobic001G302600 Sobic001G302600 Sobic003G399700--Sobic001G302600 Sobic002G250000 Sobic002G250000 Sobic003G399700--Sobic002G250000 Sobic002G219400 Sobic002G219400 Sobic003G399700--Sobic002G219400 Sobic009G183900 Sobic009G183900 Sobic002G234400--Sobic009G183900 Sobic004G108200 Sobic004G108200 Sobic002G234400--Sobic004G108200 Sobic002G234400--Sobic002G250000 Sobic004G229400 Sobic004G229400 Sobic002G234400--Sobic004G229400 Sobic003G148300 Sobic003G148300 Sobic002G234400--Sobic003G148300 Sobic001G195200 Sobic001G195200 Sobic002G234400--Sobic001G195200 Sobic001G487500 Sobic001G487500 Sobic002G234400--Sobic001G487500 Sobic002G234400--Sobic006G198700 Sobic004G086400 Sobic004G086400 Sobic002G234400--Sobic004G086400 Sobic001G231900--Sobic003G399700 Sobic001G304201 Sobic001G304201 Sobic001G231900--Sobic001G304201 Sobic001G231900--Sobic001G302600 Sobic009G106400 Sobic009G106400 Sobic001G231900--Sobic009G106400 Sobic004G349125 Sobic004G349125 Sobic001G231900--Sobic004G349125 Sobic007G021700 Sobic007G021700 Sobic001G231900--Sobic007G021700 Sobic001G231900--Sobic002G219400 Sobic001G231900--Sobic006G198700 Sobic003G228600 Sobic003G228600 Sobic001G231900--Sobic003G228600 Sobic006G172550--Sobic006G172500 Sobic006G172550--Sobic004G292900 Sobic006G172550--Sobic001G302600 Sobic006G172601 Sobic006G172601 Sobic006G172550--Sobic006G172601 Sobic004G297900 Sobic004G297900 Sobic006G172550--Sobic004G297900 Sobic001G300500 Sobic001G300500 Sobic006G172550--Sobic001G300500 Sobic005G073000 Sobic005G073000 Sobic006G172550--Sobic005G073000 Sobic004G295100 Sobic004G295100 Sobic006G172550--Sobic004G295100 Sobic003G311800 Sobic003G311800 Sobic006G172550--Sobic003G311800 Sobic006G198700--Sobic004G292900 Sobic006G198700--Sobic002G234400 Sobic006G198700--Sobic009G183900 Sobic006G234800 Sobic006G234800 Sobic006G198700--Sobic006G234800 Sobic002G354200 Sobic002G354200 Sobic006G198700--Sobic002G354200 Sobic007G017500 Sobic007G017500 Sobic006G198700--Sobic007G017500 Sobic006G198700--Sobic004G108200 Sobic006G103000 Sobic006G103000 Sobic006G198700--Sobic006G103000 Sobic007G058400 Sobic007G058400 Sobic006G198700--Sobic007G058400 Sobic004G292900--Sobic006G172550 Sobic004G292900--Sobic001G302600 Sobic001G304100 Sobic001G304100 Sobic004G292900--Sobic001G304100 Sobic001G238400 Sobic001G238400 Sobic004G292900--Sobic001G238400 Sobic004G292900--Sobic006G234800 Sobic004G292900--Sobic006G198700 Sobic001G416200 Sobic001G416200 Sobic004G292900--Sobic001G416200 Sobic009G188000 Sobic009G188000 Sobic004G292900--Sobic009G188000 Sobic004G292900--Sobic002G354200 Sobic006G172500--Sobic006G172550 Sobic003G399600 Sobic003G399600 Sobic006G172500--Sobic003G399600 Sobic002G085900 Sobic002G085900 Sobic006G172500--Sobic002G085900 Sobic006G225500 Sobic006G225500 Sobic006G172500--Sobic006G225500 Sobic010G088800 Sobic010G088800 Sobic006G172500--Sobic010G088800 Sobic006G172500--Sobic001G304201 Sobic002G326500 Sobic002G326500 Sobic006G172500--Sobic002G326500 Sobic006G172500--Sobic002G250000 Sobic007G090460 Sobic007G090460 Sobic006G172500--Sobic007G090460 Sobic001G302600--Sobic001G416200 Sobic001G302600--Sobic001G304100 Sobic001G302600--Sobic004G349125 Sobic002G003800 Sobic002G003800 Sobic001G302600--Sobic002G003800 Sobic001G161500 Sobic001G161500 Sobic001G302600--Sobic001G161500 Sobic004G042000 Sobic004G042000 Sobic001G302600--Sobic004G042000 Sobic001G302600--Sobic001G304201 Sobic001G302600--Sobic004G292900 Sobic006G197100 Sobic006G197100 Sobic001G302600--Sobic006G197100 Sobic002G250000--Sobic002G234400 Sobic001G397300 Sobic001G397300 Sobic002G250000--Sobic001G397300 Sobic010G029700 Sobic010G029700 Sobic002G250000--Sobic010G029700 Sobic008G186100 Sobic008G186100 Sobic002G250000--Sobic008G186100 Sobic005G011300 Sobic005G011300 Sobic002G250000--Sobic005G011300 Sobic007G006300 Sobic007G006300 Sobic002G250000--Sobic007G006300 Sobic002G250000--Sobic004G108200 Sobic002G287100 Sobic002G287100 Sobic002G250000--Sobic002G287100 Sobic003G033900 Sobic003G033900 Sobic002G250000--Sobic003G033900 Sobic002G219400--Sobic003G399700 Sobic002G219400--Sobic001G231900 Sobic002G219400--Sobic010G088800 Sobic006G274933 Sobic006G274933 Sobic002G219400--Sobic006G274933 Sobic002G219400--Sobic001G302600 Sobic006G105000 Sobic006G105000 Sobic002G219400--Sobic006G105000 Sobic002G219400--Sobic007G021700 Sobic010G063033 Sobic010G063033 Sobic002G219400--Sobic010G063033 Sobic002G219400--Sobic001G304201
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.