Gene annotation
Transcriptome id Sobic.001G231900.1
Synonym Sb01g020330
Functional annotation glycine-rich cell wall structural protein 2 precursor, putative, expressed
UniProt C5WZI9
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os10g31540.1 : glycine-rich cell wall structural protein 2 precursor, putative, expressed
MaizeGDB (Corn) Zm00025a006739
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G399700 LTPL38 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
2 Sobic.001G304201 - -
3 Sobic.001G302600 LTPL147 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
4 Sobic.009G106400 GCRP10 - Glycine and cysteine rich family protein precursor, expressed -
5 Sobic.004G349125 - -
6 Sobic.007G021700 carrier, putative, expressed -
7 Sobic.002G219400 oxidoreductase/ transition metal ion binding protein, putative, expressed -
8 Sobic.006G198700 MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
9 Sobic.003G228600 cytochrome P450 72A1, putative, expressed -
10 Sobic.001G416200 Responsive to hight light 41(PubMedID : 26320239)@ZOS3-09 - C2H2 zinc finger protein, expressed -
11 Sobic.002G085900 expressed protein -
12 Sobic.006G172500 LTPL121 - Protease inhibitor/seed storage/LTP family protein precursor, putative, expressed -
13 Sobic.010G001000 expressed protein -
14 Sobic.001G161500 "domain confirmed by Pfam database, expression supported by NCBI EST database, expression induced by IAA and BR treatments"(PubMedID : 20499123)@OsIAA12 - Auxin-responsive Aux/IAA gene family member, expressed K14484: auxin-responsive protein IAA
15 Sobic.002G123500 dehydrodolichyl diphosphate synthase, putative, expressed K11778: DHDDS, RER2, ditrans,polycis-polyprenyl diphosphate synthase
16 Sobic.006G172550 - -
17 Sobic.010G088800 cytokinin-O-glucosyltransferase 2, putative, expressed -
18 Sobic.004G292900 LTPL112 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
19 Sobic.003G059000 POEI43 - Pollen Ole e I allergen and extensin family protein precursor, putative, expressed -
20 Sobic.003G311800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@xylosyltransferase, putative, expressed -


Gene co-expression network
sample Sobic001G231900 Sobic001G231900 Sobic003G399700 Sobic003G399700 Sobic001G231900--Sobic003G399700 Sobic001G304201 Sobic001G304201 Sobic001G231900--Sobic001G304201 Sobic001G302600 Sobic001G302600 Sobic001G231900--Sobic001G302600 Sobic009G106400 Sobic009G106400 Sobic001G231900--Sobic009G106400 Sobic004G349125 Sobic004G349125 Sobic001G231900--Sobic004G349125 Sobic007G021700 Sobic007G021700 Sobic001G231900--Sobic007G021700 Sobic002G219400 Sobic002G219400 Sobic001G231900--Sobic002G219400 Sobic006G198700 Sobic006G198700 Sobic001G231900--Sobic006G198700 Sobic003G228600 Sobic003G228600 Sobic001G231900--Sobic003G228600 Sobic002G234400 Sobic002G234400 Sobic003G399700--Sobic002G234400 Sobic003G399700--Sobic001G231900 Sobic006G172550 Sobic006G172550 Sobic003G399700--Sobic006G172550 Sobic003G399700--Sobic006G198700 Sobic004G292900 Sobic004G292900 Sobic003G399700--Sobic004G292900 Sobic006G172500 Sobic006G172500 Sobic003G399700--Sobic006G172500 Sobic003G399700--Sobic001G302600 Sobic002G250000 Sobic002G250000 Sobic003G399700--Sobic002G250000 Sobic003G399700--Sobic002G219400 Sobic001G304201--Sobic001G302600 Sobic004G042000 Sobic004G042000 Sobic001G304201--Sobic004G042000 Sobic002G003800 Sobic002G003800 Sobic001G304201--Sobic002G003800 Sobic002G213600 Sobic002G213600 Sobic001G304201--Sobic002G213600 Sobic002G326500 Sobic002G326500 Sobic001G304201--Sobic002G326500 Sobic003G399600 Sobic003G399600 Sobic001G304201--Sobic003G399600 Sobic003G311800 Sobic003G311800 Sobic001G304201--Sobic003G311800 Sobic009G035300 Sobic009G035300 Sobic001G304201--Sobic009G035300 Sobic006G197100 Sobic006G197100 Sobic001G304201--Sobic006G197100 Sobic001G416200 Sobic001G416200 Sobic001G302600--Sobic001G416200 Sobic001G304100 Sobic001G304100 Sobic001G302600--Sobic001G304100 Sobic001G302600--Sobic004G349125 Sobic001G302600--Sobic002G003800 Sobic001G161500 Sobic001G161500 Sobic001G302600--Sobic001G161500 Sobic001G302600--Sobic004G042000 Sobic001G302600--Sobic001G304201 Sobic001G302600--Sobic004G292900 Sobic001G302600--Sobic006G197100 Sobic001G238800 Sobic001G238800 Sobic009G106400--Sobic001G238800 Sobic003G360600 Sobic003G360600 Sobic009G106400--Sobic003G360600 Sobic010G106500 Sobic010G106500 Sobic009G106400--Sobic010G106500 Sobic007G169900 Sobic007G169900 Sobic009G106400--Sobic007G169900 Sobic009G106400--Sobic004G349125 Sobic009G106400--Sobic001G416200 Sobic004G318700 Sobic004G318700 Sobic009G106400--Sobic004G318700 Sobic002G416900 Sobic002G416900 Sobic009G106400--Sobic002G416900 Sobic009G106400--Sobic001G161500 Sobic004G349125--Sobic001G416200 Sobic004G349125--Sobic006G197100 Sobic004G349125--Sobic001G302600 Sobic004G349125--Sobic001G161500 Sobic004G349125--Sobic004G042000 Sobic004G349125--Sobic003G228600 Sobic004G349125--Sobic002G003800 Sobic004G202400 Sobic004G202400 Sobic004G349125--Sobic004G202400 Sobic004G349125--Sobic003G311800 Sobic003G059000 Sobic003G059000 Sobic007G021700--Sobic003G059000 Sobic007G021700--Sobic003G228600 Sobic010G088800 Sobic010G088800 Sobic007G021700--Sobic010G088800 Sobic007G021700--Sobic003G399600 Sobic001G318300 Sobic001G318300 Sobic007G021700--Sobic001G318300 Sobic004G038700 Sobic004G038700 Sobic007G021700--Sobic004G038700 Sobic001G542000 Sobic001G542000 Sobic007G021700--Sobic001G542000 Sobic010G241800 Sobic010G241800 Sobic007G021700--Sobic010G241800 Sobic007G021700--Sobic001G231900 Sobic002G219400--Sobic003G399700 Sobic002G219400--Sobic001G231900 Sobic002G219400--Sobic010G088800 Sobic006G274933 Sobic006G274933 Sobic002G219400--Sobic006G274933 Sobic002G219400--Sobic001G302600 Sobic006G105000 Sobic006G105000 Sobic002G219400--Sobic006G105000 Sobic002G219400--Sobic007G021700 Sobic010G063033 Sobic010G063033 Sobic002G219400--Sobic010G063033 Sobic002G219400--Sobic001G304201 Sobic006G198700--Sobic004G292900 Sobic006G198700--Sobic002G234400 Sobic009G183900 Sobic009G183900 Sobic006G198700--Sobic009G183900 Sobic006G234800 Sobic006G234800 Sobic006G198700--Sobic006G234800 Sobic002G354200 Sobic002G354200 Sobic006G198700--Sobic002G354200 Sobic007G017500 Sobic007G017500 Sobic006G198700--Sobic007G017500 Sobic004G108200 Sobic004G108200 Sobic006G198700--Sobic004G108200 Sobic006G103000 Sobic006G103000 Sobic006G198700--Sobic006G103000 Sobic007G058400 Sobic007G058400 Sobic006G198700--Sobic007G058400 Sobic003G228600--Sobic004G349125 Sobic005G156500 Sobic005G156500 Sobic003G228600--Sobic005G156500 Sobic003G228600--Sobic004G038700 Sobic003G228600--Sobic006G197100 Sobic003G228600--Sobic001G416200 Sobic008G011700 Sobic008G011700 Sobic003G228600--Sobic008G011700 Sobic001G264000 Sobic001G264000 Sobic003G228600--Sobic001G264000 Sobic001G067100 Sobic001G067100 Sobic003G228600--Sobic001G067100 Sobic003G228600--Sobic006G274933
Octagon: transcription factors


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