Gene annotation
Transcriptome id Sobic.006G172500.1
Synonym Sb06g024770
Functional annotation LTPL121 - Protease inhibitor/seed storage/LTP family protein precursor, putative, expressed
UniProt C5YDJ2
Pfam PF14368
Panther DB PTHR31731 PTHR31731:SF7
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G12520 : Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
RAP-DB (Rice) LOC_Os04g46820.1 : LTPL121 - Protease inhibitor/seed storage/LTP family protein precursor, putative, expressed
MaizeGDB (Corn) Zm00025a056849 , Zm00025a056854
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G172550 - -
2 Sobic.003G399600 LTPL38 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
3 Sobic.002G085900 expressed protein -
4 Sobic.006G225500 plastocyanin-like domain containing protein, putative, expressed -
5 Sobic.010G088800 cytokinin-O-glucosyltransferase 2, putative, expressed -
6 Sobic.001G304201 - -
7 Sobic.002G326500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@TKL_IRAK_DUF26-la.4 - DUF26 kinases have homology to DUF26 containing loci, expressed -
8 Sobic.002G250000 Protein dihydroflavonol-4-reductase DFR (Os)(PubMedID : 27208977)@dehydrogenase, putative, expressed -
9 Sobic.007G090460 - K08235: xyloglucan:xyloglucosyl transferase
10 Sobic.001G302600 LTPL147 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
11 Sobic.003G399700 LTPL38 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
12 Sobic.004G295100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@aquaporin protein, putative, expressed K09873: aquaporin TIP
13 Sobic.003G311800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@xylosyltransferase, putative, expressed -
14 Sobic.002G183700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@L-ascorbate oxidase precursor, putative, expressed -
15 Sobic.002G154600 fasciclin-like arabinogalactan protein 8 precursor, putative, expressed -
16 Sobic.006G172601 - -
17 Sobic.004G292900 LTPL112 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
18 Sobic.001G300500 expansin precursor, putative, expressed -
19 Sobic.004G297900 plastocyanin-like domain containing protein, putative, expressed -
20 Sobic.005G073000 stress responsive protein, putative, expressed -


Gene co-expression network
sample Sobic006G172500 Sobic006G172500 Sobic006G172550 Sobic006G172550 Sobic006G172500--Sobic006G172550 Sobic003G399600 Sobic003G399600 Sobic006G172500--Sobic003G399600 Sobic002G085900 Sobic002G085900 Sobic006G172500--Sobic002G085900 Sobic006G225500 Sobic006G225500 Sobic006G172500--Sobic006G225500 Sobic010G088800 Sobic010G088800 Sobic006G172500--Sobic010G088800 Sobic001G304201 Sobic001G304201 Sobic006G172500--Sobic001G304201 Sobic002G326500 Sobic002G326500 Sobic006G172500--Sobic002G326500 Sobic002G250000 Sobic002G250000 Sobic006G172500--Sobic002G250000 Sobic007G090460 Sobic007G090460 Sobic006G172500--Sobic007G090460 Sobic006G172550--Sobic006G172500 Sobic004G292900 Sobic004G292900 Sobic006G172550--Sobic004G292900 Sobic001G302600 Sobic001G302600 Sobic006G172550--Sobic001G302600 Sobic006G172601 Sobic006G172601 Sobic006G172550--Sobic006G172601 Sobic004G297900 Sobic004G297900 Sobic006G172550--Sobic004G297900 Sobic001G300500 Sobic001G300500 Sobic006G172550--Sobic001G300500 Sobic005G073000 Sobic005G073000 Sobic006G172550--Sobic005G073000 Sobic004G295100 Sobic004G295100 Sobic006G172550--Sobic004G295100 Sobic003G311800 Sobic003G311800 Sobic006G172550--Sobic003G311800 Sobic003G399600--Sobic006G225500 Sobic003G269600 Sobic003G269600 Sobic003G399600--Sobic003G269600 Sobic003G399600--Sobic002G326500 Sobic003G140700 Sobic003G140700 Sobic003G399600--Sobic003G140700 Sobic003G399600--Sobic006G172500 Sobic003G399600--Sobic001G304201 Sobic004G110700 Sobic004G110700 Sobic003G399600--Sobic004G110700 Sobic009G186500 Sobic009G186500 Sobic003G399600--Sobic009G186500 Sobic006G150100 Sobic006G150100 Sobic003G399600--Sobic006G150100 Sobic002G085900--Sobic006G225500 Sobic002G085900--Sobic006G172500 Sobic002G085900--Sobic003G399600 Sobic002G085900--Sobic006G172550 Sobic002G329200 Sobic002G329200 Sobic002G085900--Sobic002G329200 Sobic002G085900--Sobic007G090460 Sobic006G235200 Sobic006G235200 Sobic002G085900--Sobic006G235200 Sobic003G121100 Sobic003G121100 Sobic002G085900--Sobic003G121100 Sobic002G183700 Sobic002G183700 Sobic002G085900--Sobic002G183700 Sobic006G225500--Sobic009G186500 Sobic006G225500--Sobic003G140700 Sobic005G127400 Sobic005G127400 Sobic006G225500--Sobic005G127400 Sobic002G255000 Sobic002G255000 Sobic006G225500--Sobic002G255000 Sobic006G225500--Sobic003G399600 Sobic006G273300 Sobic006G273300 Sobic006G225500--Sobic006G273300 Sobic006G225500--Sobic002G183700 Sobic003G064800 Sobic003G064800 Sobic006G225500--Sobic003G064800 Sobic007G008600 Sobic007G008600 Sobic006G225500--Sobic007G008600 Sobic010G088800--Sobic007G090460 Sobic003G140600 Sobic003G140600 Sobic010G088800--Sobic003G140600 Sobic006G103300 Sobic006G103300 Sobic010G088800--Sobic006G103300 Sobic010G088800--Sobic006G172500 Sobic010G088800--Sobic006G172550 Sobic010G088800--Sobic006G225500 Sobic005G166700 Sobic005G166700 Sobic010G088800--Sobic005G166700 Sobic010G088800--Sobic002G085900 Sobic010G088800--Sobic007G008600 Sobic001G304201--Sobic001G302600 Sobic004G042000 Sobic004G042000 Sobic001G304201--Sobic004G042000 Sobic002G003800 Sobic002G003800 Sobic001G304201--Sobic002G003800 Sobic002G213600 Sobic002G213600 Sobic001G304201--Sobic002G213600 Sobic001G304201--Sobic002G326500 Sobic001G304201--Sobic003G399600 Sobic001G304201--Sobic003G311800 Sobic009G035300 Sobic009G035300 Sobic001G304201--Sobic009G035300 Sobic006G197100 Sobic006G197100 Sobic001G304201--Sobic006G197100 Sobic002G326500--Sobic003G399600 Sobic008G016000 Sobic008G016000 Sobic002G326500--Sobic008G016000 Sobic002G326500--Sobic001G304201 Sobic002G326500--Sobic002G003800 Sobic002G185800 Sobic002G185800 Sobic002G326500--Sobic002G185800 Sobic002G326500--Sobic006G172500 Sobic002G326500--Sobic003G140700 Sobic002G326500--Sobic009G035300 Sobic005G080400 Sobic005G080400 Sobic002G326500--Sobic005G080400 Sobic002G234400 Sobic002G234400 Sobic002G250000--Sobic002G234400 Sobic001G397300 Sobic001G397300 Sobic002G250000--Sobic001G397300 Sobic010G029700 Sobic010G029700 Sobic002G250000--Sobic010G029700 Sobic008G186100 Sobic008G186100 Sobic002G250000--Sobic008G186100 Sobic005G011300 Sobic005G011300 Sobic002G250000--Sobic005G011300 Sobic007G006300 Sobic007G006300 Sobic002G250000--Sobic007G006300 Sobic004G108200 Sobic004G108200 Sobic002G250000--Sobic004G108200 Sobic002G287100 Sobic002G287100 Sobic002G250000--Sobic002G287100 Sobic003G033900 Sobic003G033900 Sobic002G250000--Sobic003G033900 Sobic007G090460--Sobic010G088800 Sobic007G090460--Sobic006G103300 Sobic005G110406 Sobic005G110406 Sobic007G090460--Sobic005G110406 Sobic007G090460--Sobic002G183700 Sobic007G090460--Sobic006G225500 Sobic007G090460--Sobic002G085900 Sobic007G090460--Sobic006G172500 Sobic007G090460--Sobic004G110700 Sobic004G029100 Sobic004G029100 Sobic007G090460--Sobic004G029100
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.