Gene annotation
Transcriptome id Sobic.002G326500.1
Synonym CRK23, Sb02g035350
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence (PubMedID : 27586543)
TKL_IRAK_DUF26-la.4 - DUF26 kinases have homology to DUF26 containing loci, expressed
UniProt A0A1B6QEP0
Pfam PF01657 PF07714
Panther DB PTHR27002 PTHR27002:SF98
NCBI CDD KOG1187; Serine/threonine protein kinase
KEGG Orthology -
Gene Ontology GO:0006468; protein phosphorylation GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT4G23310 : cysteine-rich RLK (RECEPTOR-like protein kinase) 23
RAP-DB (Rice) LOC_Os07g35004.1 : TKL_IRAK_DUF26-la.4 - DUF26 kinases have homology to DUF26 containing loci, expressed
MaizeGDB (Corn) Zm00025a041454 , Zm00025a044078 , Zm00025a048337 , Zm00025a048283 , Zm00025a048282 , Zm00025a048280 , Zm00025a005417 , Zm00025a044080
Brachypodium PNT74309 , KQK15905 , KQK15913 , KQK15915 , KQK13771 , KQK00979
Barley HORVU2Hr1G042520.3 , HORVU2Hr1G042520.2 , HORVU2Hr1G042520.4 , HORVU2Hr1G042520.7 , HORVU2Hr1G042520.6 , HORVU2Hr1G042520.9 , HORVU2Hr1G042520.8 , HORVU7Hr1G046620.12 , HORVU7Hr1G046620.11 , HORVU7Hr1G046620.10 , HORVU2Hr1G042520.10 , HORVU2Hr1G044890.7 , HORVU2Hr1G044890.6 , HORVU2Hr1G044890.5 , HORVU2Hr1G044890.4 , HORVU2Hr1G044890.3 , HORVU2Hr1G044890.2 , HORVU2Hr1G044890.1 , HORVU2Hr1G044890.9 , HORVU2Hr1G044890.8 , HORVU7Hr1G105190.2 , HORVU7Hr1G105190.1 , HORVU2Hr1G044890.14 , HORVU2Hr1G044890.13 , HORVU2Hr1G044890.12 , HORVU2Hr1G044890.11 , HORVU2Hr1G044890.10 , HORVU7Hr1G046620.8
Wheat TraesCS2B02G242600 , TraesCS2A02G217300 , TraesCS2A02G217300 , TraesCS2A02G217300 , TraesCS1B02G283400 , TraesCS2B02G236900 , TraesCS2D02G223100 , TraesCS2D02G223100 , TraesCS2D02G223100
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G399600 LTPL38 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
2 Sobic.008G016000 major facilitator superfamily antiporter, putative, expressed -
3 Sobic.001G304201 - -
4 Sobic.002G003800 plastocyanin-like domain containing protein, putative, expressed -
5 Sobic.002G185800 transporter, putative, expressed -
6 Sobic.006G172500 LTPL121 - Protease inhibitor/seed storage/LTP family protein precursor, putative, expressed -
7 Sobic.003G140700 peroxidase precursor, putative, expressed -
8 Sobic.009G035300 expressed protein -
9 Sobic.005G080400 1-aminocyclopropane-1-carboxylate oxidase 2, putative, expressed -
10 Sobic.001G264000 dehydrogenase, putative, expressed K00001: E1.1.1.1, alcohol dehydrogenase
11 Sobic.001G049900 UDP-rhamnose rhamnosyltransferase, putative, expressed -
12 Sobic.010G212500 - -
13 Sobic.003G119500 expressed protein -
14 Sobic.003G269600 "CYP711A family, the cytochrome P450 homepage. Catalyzed the conversion of carlactone (CL) to carlactonoic acid (CLA)."(PubMedID : 33793911)@Synthesized carlactonoic acid (CLA) from carlactone (CL).(PubMedID : 34970291)@cytochrome P450, putative, expressed -
15 Sobic.003G311800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@xylosyltransferase, putative, expressed -
16 Sobic.004G042000 apoptosis-inducing factor 2, putative, expressed -
17 Sobic.004G322100 hypro1, putative, expressed -
18 Sobic.003G093700 expressed protein -
19 Sobic.006G197100 DNA binding protein, putative, expressed -
20 Sobic.004G348800 "domain confirmed by Pfam database, expression supported by NCBI EST database, expressed in root, expression induced by IAA and BR treatments"(PubMedID : 20499123)@DUF260 domain containing protein, putative, expressed -


Gene co-expression network
sample Sobic002G326500 Sobic002G326500 Sobic003G399600 Sobic003G399600 Sobic002G326500--Sobic003G399600 Sobic008G016000 Sobic008G016000 Sobic002G326500--Sobic008G016000 Sobic001G304201 Sobic001G304201 Sobic002G326500--Sobic001G304201 Sobic002G003800 Sobic002G003800 Sobic002G326500--Sobic002G003800 Sobic002G185800 Sobic002G185800 Sobic002G326500--Sobic002G185800 Sobic006G172500 Sobic006G172500 Sobic002G326500--Sobic006G172500 Sobic003G140700 Sobic003G140700 Sobic002G326500--Sobic003G140700 Sobic009G035300 Sobic009G035300 Sobic002G326500--Sobic009G035300 Sobic005G080400 Sobic005G080400 Sobic002G326500--Sobic005G080400 Sobic006G225500 Sobic006G225500 Sobic003G399600--Sobic006G225500 Sobic003G269600 Sobic003G269600 Sobic003G399600--Sobic003G269600 Sobic003G399600--Sobic002G326500 Sobic003G399600--Sobic003G140700 Sobic003G399600--Sobic006G172500 Sobic003G399600--Sobic001G304201 Sobic004G110700 Sobic004G110700 Sobic003G399600--Sobic004G110700 Sobic009G186500 Sobic009G186500 Sobic003G399600--Sobic009G186500 Sobic006G150100 Sobic006G150100 Sobic003G399600--Sobic006G150100 Sobic008G016000--Sobic002G326500 Sobic004G322100 Sobic004G322100 Sobic008G016000--Sobic004G322100 Sobic003G000100 Sobic003G000100 Sobic008G016000--Sobic003G000100 Sobic004G271800 Sobic004G271800 Sobic008G016000--Sobic004G271800 Sobic008G016000--Sobic003G399600 Sobic002G183700 Sobic002G183700 Sobic008G016000--Sobic002G183700 Sobic008G016000--Sobic004G110700 Sobic008G016000--Sobic003G140700 Sobic009G150500 Sobic009G150500 Sobic008G016000--Sobic009G150500 Sobic001G302600 Sobic001G302600 Sobic001G304201--Sobic001G302600 Sobic004G042000 Sobic004G042000 Sobic001G304201--Sobic004G042000 Sobic001G304201--Sobic002G003800 Sobic002G213600 Sobic002G213600 Sobic001G304201--Sobic002G213600 Sobic001G304201--Sobic002G326500 Sobic001G304201--Sobic003G399600 Sobic003G311800 Sobic003G311800 Sobic001G304201--Sobic003G311800 Sobic001G304201--Sobic009G035300 Sobic006G197100 Sobic006G197100 Sobic001G304201--Sobic006G197100 Sobic002G003800--Sobic006G197100 Sobic002G003800--Sobic004G042000 Sobic002G003800--Sobic003G311800 Sobic002G003800--Sobic001G302600 Sobic001G049900 Sobic001G049900 Sobic002G003800--Sobic001G049900 Sobic001G416200 Sobic001G416200 Sobic002G003800--Sobic001G416200 Sobic004G310200 Sobic004G310200 Sobic002G003800--Sobic004G310200 Sobic003G079400 Sobic003G079400 Sobic002G003800--Sobic003G079400 Sobic001G304100 Sobic001G304100 Sobic002G003800--Sobic001G304100 Sobic005G046700 Sobic005G046700 Sobic002G185800--Sobic005G046700 Sobic004G139300 Sobic004G139300 Sobic002G185800--Sobic004G139300 Sobic002G216100 Sobic002G216100 Sobic002G185800--Sobic002G216100 Sobic002G185800--Sobic006G197100 Sobic001G264000 Sobic001G264000 Sobic002G185800--Sobic001G264000 Sobic007G178900 Sobic007G178900 Sobic002G185800--Sobic007G178900 Sobic007G176100 Sobic007G176100 Sobic002G185800--Sobic007G176100 Sobic006G256900 Sobic006G256900 Sobic002G185800--Sobic006G256900 Sobic007G176000 Sobic007G176000 Sobic002G185800--Sobic007G176000 Sobic006G172550 Sobic006G172550 Sobic006G172500--Sobic006G172550 Sobic006G172500--Sobic003G399600 Sobic002G085900 Sobic002G085900 Sobic006G172500--Sobic002G085900 Sobic006G172500--Sobic006G225500 Sobic010G088800 Sobic010G088800 Sobic006G172500--Sobic010G088800 Sobic006G172500--Sobic001G304201 Sobic006G172500--Sobic002G326500 Sobic002G250000 Sobic002G250000 Sobic006G172500--Sobic002G250000 Sobic007G090460 Sobic007G090460 Sobic006G172500--Sobic007G090460 Sobic009G219200 Sobic009G219200 Sobic003G140700--Sobic009G219200 Sobic003G064800 Sobic003G064800 Sobic003G140700--Sobic003G064800 Sobic003G140700--Sobic006G225500 Sobic003G140700--Sobic004G322100 Sobic001G438200 Sobic001G438200 Sobic003G140700--Sobic001G438200 Sobic002G255000 Sobic002G255000 Sobic003G140700--Sobic002G255000 Sobic001G238200 Sobic001G238200 Sobic003G140700--Sobic001G238200 Sobic005G127400 Sobic005G127400 Sobic003G140700--Sobic005G127400 Sobic003G140700--Sobic004G110700 Sobic009G035300--Sobic001G264000 Sobic009G035300--Sobic004G042000 Sobic009G035300--Sobic001G416200 Sobic001G161500 Sobic001G161500 Sobic009G035300--Sobic001G161500 Sobic004G349125 Sobic004G349125 Sobic009G035300--Sobic004G349125 Sobic009G035300--Sobic001G302600 Sobic009G035300--Sobic006G197100 Sobic009G035300--Sobic001G304201 Sobic009G035300--Sobic002G003800 Sobic005G203200 Sobic005G203200 Sobic005G080400--Sobic005G203200 Sobic002G228800 Sobic002G228800 Sobic005G080400--Sobic002G228800 Sobic004G038700 Sobic004G038700 Sobic005G080400--Sobic004G038700 Sobic005G202700 Sobic005G202700 Sobic005G080400--Sobic005G202700 Sobic007G057400 Sobic007G057400 Sobic005G080400--Sobic007G057400 Sobic005G080400--Sobic009G035300 Sobic005G080400--Sobic002G326500 Sobic003G351600 Sobic003G351600 Sobic005G080400--Sobic003G351600 Sobic005G166700 Sobic005G166700 Sobic005G080400--Sobic005G166700
Octagon: transcription factors


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