Gene annotation
Transcriptome id Sobic.002G219400.1
Synonym Sb02g026080
Functional annotation oxidoreductase/ transition metal ion binding protein, putative, expressed
UniProt C5XDT3
Pfam -
Panther DB PTHR11527 PTHR11527:SF161
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G31940 : -
RAP-DB (Rice) LOC_Os09g27330.1 : oxidoreductase/ transition metal ion binding protein, putative, expressed
MaizeGDB (Corn) Zm00025a047196
Brachypodium KQJ90447
Barley HORVU5Hr1G066740.2 , HORVU5Hr1G066740.3 , HORVU5Hr1G066740.1
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G399700 LTPL38 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
2 Sobic.001G231900 glycine-rich cell wall structural protein 2 precursor, putative, expressed -
3 Sobic.010G088800 cytokinin-O-glucosyltransferase 2, putative, expressed -
4 Sobic.006G274933 - -
5 Sobic.001G302600 LTPL147 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
6 Sobic.006G105000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@aldose 1-epimerase, putative, expressed K01785: galM, aldose 1-epimerase
7 Sobic.007G021700 carrier, putative, expressed -
8 Sobic.010G063033 - -
9 Sobic.001G304201 - -
10 Sobic.006G172500 LTPL121 - Protease inhibitor/seed storage/LTP family protein precursor, putative, expressed -
11 Sobic.002G123500 dehydrodolichyl diphosphate synthase, putative, expressed K11778: DHDDS, RER2, ditrans,polycis-polyprenyl diphosphate synthase
12 Sobic.002G354200 transporter family protein, putative, expressed -
13 Sobic.004G310200 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@receptor-like protein kinase like protein, putative, expressed -
14 Sobic.006G198700 MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
15 Sobic.003G311800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@xylosyltransferase, putative, expressed -
16 Sobic.009G240600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@phospholipase, putative, expressed -
17 Sobic.006G157900 C2 domain containing protein, putative, expressed -
18 Sobic.004G349125 - -
19 Sobic.006G172550 - -
20 Sobic.002G085900 expressed protein -


Gene co-expression network
sample Sobic002G219400 Sobic002G219400 Sobic003G399700 Sobic003G399700 Sobic002G219400--Sobic003G399700 Sobic001G231900 Sobic001G231900 Sobic002G219400--Sobic001G231900 Sobic010G088800 Sobic010G088800 Sobic002G219400--Sobic010G088800 Sobic006G274933 Sobic006G274933 Sobic002G219400--Sobic006G274933 Sobic001G302600 Sobic001G302600 Sobic002G219400--Sobic001G302600 Sobic006G105000 Sobic006G105000 Sobic002G219400--Sobic006G105000 Sobic007G021700 Sobic007G021700 Sobic002G219400--Sobic007G021700 Sobic010G063033 Sobic010G063033 Sobic002G219400--Sobic010G063033 Sobic001G304201 Sobic001G304201 Sobic002G219400--Sobic001G304201 Sobic002G234400 Sobic002G234400 Sobic003G399700--Sobic002G234400 Sobic003G399700--Sobic001G231900 Sobic006G172550 Sobic006G172550 Sobic003G399700--Sobic006G172550 Sobic006G198700 Sobic006G198700 Sobic003G399700--Sobic006G198700 Sobic004G292900 Sobic004G292900 Sobic003G399700--Sobic004G292900 Sobic006G172500 Sobic006G172500 Sobic003G399700--Sobic006G172500 Sobic003G399700--Sobic001G302600 Sobic002G250000 Sobic002G250000 Sobic003G399700--Sobic002G250000 Sobic003G399700--Sobic002G219400 Sobic001G231900--Sobic003G399700 Sobic001G231900--Sobic001G304201 Sobic001G231900--Sobic001G302600 Sobic009G106400 Sobic009G106400 Sobic001G231900--Sobic009G106400 Sobic004G349125 Sobic004G349125 Sobic001G231900--Sobic004G349125 Sobic001G231900--Sobic007G021700 Sobic001G231900--Sobic002G219400 Sobic001G231900--Sobic006G198700 Sobic003G228600 Sobic003G228600 Sobic001G231900--Sobic003G228600 Sobic007G090460 Sobic007G090460 Sobic010G088800--Sobic007G090460 Sobic003G140600 Sobic003G140600 Sobic010G088800--Sobic003G140600 Sobic006G103300 Sobic006G103300 Sobic010G088800--Sobic006G103300 Sobic010G088800--Sobic006G172500 Sobic010G088800--Sobic006G172550 Sobic006G225500 Sobic006G225500 Sobic010G088800--Sobic006G225500 Sobic005G166700 Sobic005G166700 Sobic010G088800--Sobic005G166700 Sobic002G085900 Sobic002G085900 Sobic010G088800--Sobic002G085900 Sobic007G008600 Sobic007G008600 Sobic010G088800--Sobic007G008600 Sobic002G183700 Sobic002G183700 Sobic006G274933--Sobic002G183700 Sobic003G311800 Sobic003G311800 Sobic006G274933--Sobic003G311800 Sobic003G269600 Sobic003G269600 Sobic006G274933--Sobic003G269600 Sobic003G140700 Sobic003G140700 Sobic006G274933--Sobic003G140700 Sobic002G361200 Sobic002G361200 Sobic006G274933--Sobic002G361200 Sobic001G062500 Sobic001G062500 Sobic006G274933--Sobic001G062500 Sobic003G399600 Sobic003G399600 Sobic006G274933--Sobic003G399600 Sobic006G274933--Sobic006G225500 Sobic003G121100 Sobic003G121100 Sobic006G274933--Sobic003G121100 Sobic001G416200 Sobic001G416200 Sobic001G302600--Sobic001G416200 Sobic001G304100 Sobic001G304100 Sobic001G302600--Sobic001G304100 Sobic001G302600--Sobic004G349125 Sobic002G003800 Sobic002G003800 Sobic001G302600--Sobic002G003800 Sobic001G161500 Sobic001G161500 Sobic001G302600--Sobic001G161500 Sobic004G042000 Sobic004G042000 Sobic001G302600--Sobic004G042000 Sobic001G302600--Sobic001G304201 Sobic001G302600--Sobic004G292900 Sobic006G197100 Sobic006G197100 Sobic001G302600--Sobic006G197100 Sobic006G157900 Sobic006G157900 Sobic006G105000--Sobic006G157900 Sobic004G264000 Sobic004G264000 Sobic006G105000--Sobic004G264000 Sobic006G105000--Sobic002G219400 Sobic009G240600 Sobic009G240600 Sobic006G105000--Sobic009G240600 Sobic007G218800 Sobic007G218800 Sobic006G105000--Sobic007G218800 Sobic010G001000 Sobic010G001000 Sobic006G105000--Sobic010G001000 Sobic003G404600 Sobic003G404600 Sobic006G105000--Sobic003G404600 Sobic006G105000--Sobic003G399700 Sobic002G261300 Sobic002G261300 Sobic006G105000--Sobic002G261300 Sobic003G059000 Sobic003G059000 Sobic007G021700--Sobic003G059000 Sobic007G021700--Sobic003G228600 Sobic007G021700--Sobic010G088800 Sobic007G021700--Sobic003G399600 Sobic001G318300 Sobic001G318300 Sobic007G021700--Sobic001G318300 Sobic004G038700 Sobic004G038700 Sobic007G021700--Sobic004G038700 Sobic001G542000 Sobic001G542000 Sobic007G021700--Sobic001G542000 Sobic010G241800 Sobic010G241800 Sobic007G021700--Sobic010G241800 Sobic007G021700--Sobic001G231900 Sobic003G427800 Sobic003G427800 Sobic010G063033--Sobic003G427800 Sobic002G184200 Sobic002G184200 Sobic010G063033--Sobic002G184200 Sobic009G144600 Sobic009G144600 Sobic010G063033--Sobic009G144600 Sobic004G127200 Sobic004G127200 Sobic010G063033--Sobic004G127200 Sobic004G228500 Sobic004G228500 Sobic010G063033--Sobic004G228500 Sobic008G187001 Sobic008G187001 Sobic010G063033--Sobic008G187001 Sobic009G183900 Sobic009G183900 Sobic010G063033--Sobic009G183900 Sobic001G279701 Sobic001G279701 Sobic010G063033--Sobic001G279701 Sobic010G063033--Sobic006G198700 Sobic001G304201--Sobic001G302600 Sobic001G304201--Sobic004G042000 Sobic001G304201--Sobic002G003800 Sobic002G213600 Sobic002G213600 Sobic001G304201--Sobic002G213600 Sobic002G326500 Sobic002G326500 Sobic001G304201--Sobic002G326500 Sobic001G304201--Sobic003G399600 Sobic001G304201--Sobic003G311800 Sobic009G035300 Sobic009G035300 Sobic001G304201--Sobic009G035300 Sobic001G304201--Sobic006G197100
Octagon: transcription factors


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