Gene annotation
Transcriptome id Sobic.010G001000.1
Synonym
Functional annotation expressed protein
UniProt C5Z222
Pfam -
Panther DB PTHR36038 PTHR36038:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os02g02160.1 : expressed protein
MaizeGDB (Corn) Zm00025a050360
Brachypodium PNT76731
Barley -
Wheat TraesCS4A02G498800 , TraesCS4A02G498800 , TraesCS7A02G001800 , TraesCS7A02G001800 , TraesCS7A02G001800 , TraesCS4A02G498800
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G042000 apoptosis-inducing factor 2, putative, expressed -
2 Sobic.006G157900 C2 domain containing protein, putative, expressed -
3 Sobic.010G063000 - -
4 Sobic.001G302600 LTPL147 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
5 Sobic.001G500000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
6 Sobic.010G185000 VQ domain containing protein, putative, expressed -
7 Sobic.006G103000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
8 Sobic.001G318500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
9 Sobic.006G059700 hydrolase, NUDIX family, domain containing protein, expressed K07766: diphosphoinositol-polyphosphate diphosphatase
10 Sobic.010G270500 GDSL-like lipase/acylhydrolase, putative, expressed -
11 Sobic.004G348400 oxidoreductase, 2OG-Fe oxygenase family protein, putative, expressed -
12 Sobic.001G416200 Responsive to hight light 41(PubMedID : 26320239)@ZOS3-09 - C2H2 zinc finger protein, expressed -
13 Sobic.004G349125 - -
14 Sobic.003G366600 anthocyanidin 3-O-glucosyltransferase, putative, expressed -
15 Sobic.003G404600 regulatory protein, putative, expressed -
16 Sobic.006G197100 DNA binding protein, putative, expressed -
17 Sobic.004G202400 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@high affinity nitrate transporter, putative, expressed -
18 Sobic.002G247600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Os9bglu30 - beta-glucosidase, similar to Os4bglu12 exoglucanase, expressed K01188: beta-glucosidase
19 Sobic.001G304201 - -
20 Sobic.009G111000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pectinesterase, putative, expressed K01051: pectinesterase


Gene co-expression network
sample Sobic010G001000 Sobic010G001000 Sobic004G042000 Sobic004G042000 Sobic010G001000--Sobic004G042000 Sobic006G157900 Sobic006G157900 Sobic010G001000--Sobic006G157900 Sobic010G063000 Sobic010G063000 Sobic010G001000--Sobic010G063000 Sobic001G302600 Sobic001G302600 Sobic010G001000--Sobic001G302600 Sobic001G500000 Sobic001G500000 Sobic010G001000--Sobic001G500000 Sobic010G185000 Sobic010G185000 Sobic010G001000--Sobic010G185000 Sobic006G103000 Sobic006G103000 Sobic010G001000--Sobic006G103000 Sobic001G318500 Sobic001G318500 Sobic010G001000--Sobic001G318500 Sobic006G059700 Sobic006G059700 Sobic010G001000--Sobic006G059700 Sobic006G197100 Sobic006G197100 Sobic004G042000--Sobic006G197100 Sobic002G003800 Sobic002G003800 Sobic004G042000--Sobic002G003800 Sobic004G349125 Sobic004G349125 Sobic004G042000--Sobic004G349125 Sobic001G416200 Sobic001G416200 Sobic004G042000--Sobic001G416200 Sobic002G213600 Sobic002G213600 Sobic004G042000--Sobic002G213600 Sobic004G042000--Sobic001G302600 Sobic003G311800 Sobic003G311800 Sobic004G042000--Sobic003G311800 Sobic001G304201 Sobic001G304201 Sobic004G042000--Sobic001G304201 Sobic001G264000 Sobic001G264000 Sobic004G042000--Sobic001G264000 Sobic006G157900--Sobic010G001000 Sobic003G366600 Sobic003G366600 Sobic006G157900--Sobic003G366600 Sobic003G007600 Sobic003G007600 Sobic006G157900--Sobic003G007600 Sobic006G157900--Sobic006G103000 Sobic006G157900--Sobic003G311800 Sobic006G157900--Sobic001G302600 Sobic004G202400 Sobic004G202400 Sobic006G157900--Sobic004G202400 Sobic010G270500 Sobic010G270500 Sobic006G157900--Sobic010G270500 Sobic002G336700 Sobic002G336700 Sobic006G157900--Sobic002G336700 Sobic006G125100 Sobic006G125100 Sobic010G063000--Sobic006G125100 Sobic002G125700 Sobic002G125700 Sobic010G063000--Sobic002G125700 Sobic010G063000--Sobic002G213600 Sobic001G237900 Sobic001G237900 Sobic010G063000--Sobic001G237900 Sobic001G503100 Sobic001G503100 Sobic010G063000--Sobic001G503100 Sobic010G063000--Sobic010G001000 Sobic001G161500 Sobic001G161500 Sobic010G063000--Sobic001G161500 Sobic010G063000--Sobic001G318500 Sobic001G325400 Sobic001G325400 Sobic010G063000--Sobic001G325400 Sobic001G302600--Sobic001G416200 Sobic001G304100 Sobic001G304100 Sobic001G302600--Sobic001G304100 Sobic001G302600--Sobic004G349125 Sobic001G302600--Sobic002G003800 Sobic001G302600--Sobic001G161500 Sobic001G302600--Sobic004G042000 Sobic001G302600--Sobic001G304201 Sobic004G292900 Sobic004G292900 Sobic001G302600--Sobic004G292900 Sobic001G302600--Sobic006G197100 Sobic003G084400 Sobic003G084400 Sobic001G500000--Sobic003G084400 Sobic002G287100 Sobic002G287100 Sobic001G500000--Sobic002G287100 Sobic001G481400 Sobic001G481400 Sobic001G500000--Sobic001G481400 Sobic009G240600 Sobic009G240600 Sobic001G500000--Sobic009G240600 Sobic004G046200 Sobic004G046200 Sobic001G500000--Sobic004G046200 Sobic001G367600 Sobic001G367600 Sobic001G500000--Sobic001G367600 Sobic009G111000 Sobic009G111000 Sobic001G500000--Sobic009G111000 Sobic001G231700 Sobic001G231700 Sobic001G500000--Sobic001G231700 Sobic001G500000--Sobic006G103000 Sobic002G247600 Sobic002G247600 Sobic010G185000--Sobic002G247600 Sobic005G018700 Sobic005G018700 Sobic010G185000--Sobic005G018700 Sobic007G227300 Sobic007G227300 Sobic010G185000--Sobic007G227300 Sobic010G185000--Sobic009G240600 Sobic004G348400 Sobic004G348400 Sobic010G185000--Sobic004G348400 Sobic002G375400 Sobic002G375400 Sobic010G185000--Sobic002G375400 Sobic010G185000--Sobic001G481400 Sobic005G206601 Sobic005G206601 Sobic010G185000--Sobic005G206601 Sobic007G151300 Sobic007G151300 Sobic010G185000--Sobic007G151300 Sobic001G402200 Sobic001G402200 Sobic006G103000--Sobic001G402200 Sobic006G268800 Sobic006G268800 Sobic006G103000--Sobic006G268800 Sobic006G103000--Sobic001G231700 Sobic006G103000--Sobic001G367600 Sobic006G103000--Sobic009G240600 Sobic010G211900 Sobic010G211900 Sobic006G103000--Sobic010G211900 Sobic006G103000--Sobic003G007600 Sobic006G103000--Sobic007G227300 Sobic006G103000--Sobic001G500000 Sobic002G004900 Sobic002G004900 Sobic001G318500--Sobic002G004900 Sobic002G017800 Sobic002G017800 Sobic001G318500--Sobic002G017800 Sobic001G318500--Sobic009G111000 Sobic002G302500 Sobic002G302500 Sobic001G318500--Sobic002G302500 Sobic002G055700 Sobic002G055700 Sobic001G318500--Sobic002G055700 Sobic004G203700 Sobic004G203700 Sobic001G318500--Sobic004G203700 Sobic004G148200 Sobic004G148200 Sobic001G318500--Sobic004G148200 Sobic001G318500--Sobic001G367600 Sobic008G027600 Sobic008G027600 Sobic001G318500--Sobic008G027600 Sobic003G404600 Sobic003G404600 Sobic006G059700--Sobic003G404600 Sobic004G262200 Sobic004G262200 Sobic006G059700--Sobic004G262200 Sobic003G280400 Sobic003G280400 Sobic006G059700--Sobic003G280400 Sobic010G272300 Sobic010G272300 Sobic006G059700--Sobic010G272300 Sobic006G059700--Sobic010G001000 Sobic006G059700--Sobic003G366600 Sobic001G147900 Sobic001G147900 Sobic006G059700--Sobic001G147900 Sobic006G059700--Sobic006G125100 Sobic002G312900 Sobic002G312900 Sobic006G059700--Sobic002G312900
Octagon: transcription factors


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