Gene annotation
Transcriptome id Sobic.003G296300.1
Synonym Sb03g034670, WRKY65, ATWRKY65
Functional annotation WRKY13, expressed
UniProt C5XK43
Pfam PF03106
Panther DB PTHR32096 PTHR32096:SF19
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0006355; regulation of transcription, DNA-templated GO:0003700DNA-binding transcription factor activity


Orthologs (automatic annotation)
TAIR AT1G29280 : WRKY DNA-binding protein 65
RAP-DB (Rice) LOC_Os01g54600.1 : WRKY13, expressed
MaizeGDB (Corn) Zm00025a027593 , Zm00025a019876 , Zm00025a040046 , Zm00025a056959 , Zm00025a034393
Brachypodium KQJ94313 , KQK09586 , KQJ82006 , KQK09741 , KQK09740
Barley HORVU1Hr1G092360.1 , HORVU1Hr1G092360.2 , HORVU1Hr1G051260.1 , HORVU1Hr1G051260.3 , HORVU1Hr1G051260.2 , HORVU3Hr1G071750.5 , HORVU3Hr1G071750.4 , HORVU3Hr1G071750.7 , HORVU3Hr1G071750.6 , HORVU3Hr1G071750.1 , HORVU3Hr1G071750.3
Wheat TraesCS1A02G197400 , TraesCS1D02G200900 , TraesCS3A02G289700 , TraesCS3A02G289700 , TraesCS1B02G212000 , TraesCS3B02G324400 , TraesCS3D02G289500 , TraesCS3A02G281900 , TraesCS3D02G281900 , TraesCS1B02G455000 , TraesCS1D02G431600 , TraesCS3B02G315600
Populus -


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cDNA sequences
Sobic.003G296300


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G345400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@ring-H2 zinc finger protein, putative, expressed -
2 Sobic.006G246100 one cut domain family member 3, putative, expressed -
3 Sobic.004G101000 helix-loop-helix DNA-binding domain containing protein, expressed -
4 Sobic.006G167800 Not investigated(PubMedID : 23766026)@ethylene-responsive transcription factor, putative, expressed K09286: EREBP-like factor
5 Sobic.001G093900 stem-specific protein TSJT1, putative, expressed -
6 Sobic.010G157500 zinc finger protein, putative, expressed -
7 Sobic.009G038000 expressed protein -
8 Sobic.001G526000 hydrolase, alpha/beta fold family protein, putative, expressed -
9 Sobic.001G195100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cytochrome P450, putative, expressed -
10 Sobic.001G530350 - -
11 Sobic.001G314800 hydrolase, alpha/beta fold family protein, putative, expressed -
12 Sobic.002G407200 sex determination protein tasselseed-2, putative, expressed -
13 Sobic.003G277500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@methyltransferase, putative, expressed -
14 Sobic.003G013600 expressed protein -
15 Sobic.004G195000 heavy metal transport/detoxification protein, putative, expressed -
16 Sobic.001G285000 - -
17 Sobic.009G216050 - -
18 Sobic.008G181300 expressed protein -
19 Sobic.009G192100 DUF567 domain containing protein, putative, expressed -
20 Sobic.006G138500 wall-associated receptor kinase-like 20 precursor, putative, expressed K04733: interleukin-1 receptor-associated kinase 4


Gene co-expression network
sample Sobic003G296300 Sobic003G296300 Sobic001G345400 Sobic001G345400 Sobic003G296300--Sobic001G345400 Sobic006G246100 Sobic006G246100 Sobic003G296300--Sobic006G246100 Sobic004G101000 Sobic004G101000 Sobic003G296300--Sobic004G101000 Sobic006G167800 Sobic006G167800 Sobic003G296300--Sobic006G167800 Sobic001G093900 Sobic001G093900 Sobic003G296300--Sobic001G093900 Sobic010G157500 Sobic010G157500 Sobic003G296300--Sobic010G157500 Sobic009G038000 Sobic009G038000 Sobic003G296300--Sobic009G038000 Sobic001G526000 Sobic001G526000 Sobic003G296300--Sobic001G526000 Sobic001G195100 Sobic001G195100 Sobic003G296300--Sobic001G195100 Sobic001G345400--Sobic003G296300 Sobic001G345400--Sobic004G101000 Sobic001G345400--Sobic009G038000 Sobic005G155600 Sobic005G155600 Sobic001G345400--Sobic005G155600 Sobic001G345400--Sobic006G246100 Sobic004G333300 Sobic004G333300 Sobic001G345400--Sobic004G333300 Sobic001G530350 Sobic001G530350 Sobic001G345400--Sobic001G530350 Sobic009G192100 Sobic009G192100 Sobic001G345400--Sobic009G192100 Sobic008G038100 Sobic008G038100 Sobic001G345400--Sobic008G038100 Sobic006G246100--Sobic003G296300 Sobic005G080200 Sobic005G080200 Sobic006G246100--Sobic005G080200 Sobic010G194300 Sobic010G194300 Sobic006G246100--Sobic010G194300 Sobic002G319100 Sobic002G319100 Sobic006G246100--Sobic002G319100 Sobic006G246100--Sobic001G345400 Sobic004G114400 Sobic004G114400 Sobic006G246100--Sobic004G114400 Sobic004G010300 Sobic004G010300 Sobic006G246100--Sobic004G010300 Sobic010G194900 Sobic010G194900 Sobic006G246100--Sobic010G194900 Sobic004G195000 Sobic004G195000 Sobic006G246100--Sobic004G195000 Sobic004G101000--Sobic001G345400 Sobic009G216050 Sobic009G216050 Sobic004G101000--Sobic009G216050 Sobic004G101000--Sobic003G296300 Sobic004G101000--Sobic009G038000 Sobic002G407200 Sobic002G407200 Sobic004G101000--Sobic002G407200 Sobic010G214200 Sobic010G214200 Sobic004G101000--Sobic010G214200 Sobic001G314800 Sobic001G314800 Sobic004G101000--Sobic001G314800 Sobic004G101000--Sobic001G195100 Sobic003G310500 Sobic003G310500 Sobic004G101000--Sobic003G310500 Sobic006G167800--Sobic001G526000 Sobic006G167800--Sobic003G296300 Sobic004G110400 Sobic004G110400 Sobic006G167800--Sobic004G110400 Sobic002G376000 Sobic002G376000 Sobic006G167800--Sobic002G376000 Sobic006G167800--Sobic010G157500 Sobic006G167800--Sobic001G093900 Sobic009G067400 Sobic009G067400 Sobic006G167800--Sobic009G067400 Sobic006G167800--Sobic001G195100 Sobic001G144400 Sobic001G144400 Sobic006G167800--Sobic001G144400 Sobic001G093900--Sobic003G296300 Sobic001G093900--Sobic001G530350 Sobic001G024500 Sobic001G024500 Sobic001G093900--Sobic001G024500 Sobic001G182600 Sobic001G182600 Sobic001G093900--Sobic001G182600 Sobic001G093900--Sobic006G167800 Sobic001G093900--Sobic002G376000 Sobic001G093900--Sobic001G526000 Sobic001G075000 Sobic001G075000 Sobic001G093900--Sobic001G075000 Sobic003G013600 Sobic003G013600 Sobic001G093900--Sobic003G013600 Sobic010G157500--Sobic003G296300 Sobic009G038200 Sobic009G038200 Sobic010G157500--Sobic009G038200 Sobic010G157500--Sobic006G167800 Sobic010G157500--Sobic003G013600 Sobic003G065600 Sobic003G065600 Sobic010G157500--Sobic003G065600 Sobic002G209100 Sobic002G209100 Sobic010G157500--Sobic002G209100 Sobic008G018600 Sobic008G018600 Sobic010G157500--Sobic008G018600 Sobic004G195800 Sobic004G195800 Sobic010G157500--Sobic004G195800 Sobic010G157500--Sobic001G093900 Sobic009G038000--Sobic004G101000 Sobic009G038000--Sobic001G345400 Sobic009G038000--Sobic003G296300 Sobic004G140000 Sobic004G140000 Sobic009G038000--Sobic004G140000 Sobic006G014700 Sobic006G014700 Sobic009G038000--Sobic006G014700 Sobic009G038000--Sobic002G407200 Sobic009G038000--Sobic008G038100 Sobic009G038000--Sobic001G314800 Sobic002G216500 Sobic002G216500 Sobic009G038000--Sobic002G216500 Sobic001G526000--Sobic006G167800 Sobic001G526000--Sobic003G296300 Sobic001G088300 Sobic001G088300 Sobic001G526000--Sobic001G088300 Sobic001G526000--Sobic001G195100 Sobic009G100500 Sobic009G100500 Sobic001G526000--Sobic009G100500 Sobic001G526000--Sobic001G314800 Sobic006G259000 Sobic006G259000 Sobic001G526000--Sobic006G259000 Sobic007G090300 Sobic007G090300 Sobic001G526000--Sobic007G090300 Sobic001G526000--Sobic004G110400 Sobic001G195100--Sobic001G314800 Sobic003G102200 Sobic003G102200 Sobic001G195100--Sobic003G102200 Sobic004G297100 Sobic004G297100 Sobic001G195100--Sobic004G297100 Sobic001G059400 Sobic001G059400 Sobic001G195100--Sobic001G059400 Sobic007G118301 Sobic007G118301 Sobic001G195100--Sobic007G118301 Sobic001G195100--Sobic007G090300 Sobic005G109000 Sobic005G109000 Sobic001G195100--Sobic005G109000 Sobic001G195100--Sobic001G088300 Sobic001G195100--Sobic003G296300
Octagon: transcription factors


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