Gene annotation
Transcriptome id Sobic.002G407200.1
Synonym Sb02g042115
Functional annotation sex determination protein tasselseed-2, putative, expressed
UniProt C5X4U1
Pfam PF13561
Panther DB PTHR24322 PTHR24322:SF408
NCBI CDD KOG0725; Reductases with broad range of substrate specificities
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G26770 : NAD(P)-binding Rossmann-fold superfamily protein
RAP-DB (Rice) LOC_Os07g46830.1 : sex determination protein tasselseed-2, putative, expressed
MaizeGDB (Corn) Zm00025a048610
Brachypodium -
Barley HORVU2Hr1G021430.1 , HORVU2Hr1G021430.2 , HORVU2Hr1G034740.5 , HORVU2Hr1G034740.1 , HORVU2Hr1G034740.2 , HORVU2Hr1G034740.3 , HORVU2Hr1G021500.1 , HORVU2Hr1G021500.2 , HORVU2Hr1G021500.3 , HORVU2Hr1G021500.4 , HORVU2Hr1G021500.5 , HORVU2Hr1G021500.6
Wheat TraesCS2B02G145200 , TraesCS2B02G145100 , TraesCS2A02G123000 , TraesCS2B02G145000 , TraesCS2D02G126000 , TraesCS2A02G123100 , TraesCS2A02G122800 , TraesCS7B02G011200 , TraesCS2B02G143900 , TraesCS2D02G125900 , TraesCS7A02G113400
Populus -


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cDNA sequences
Sobic.002G407200


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G018600 harpin-induced protein 1 domain containing protein, expressed -
2 Sobic.001G056500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@indole-3-glycerol phosphate lyase, chloroplast precursor, putative, expressed K13222: BX1, indole-3-glycerol-phosphate lyase
3 Sobic.009G216050 - -
4 Sobic.004G217700 enzyme of the cupin superfamily protein, putative, expressed K06995: uncharacterized protein
5 Sobic.004G101000 helix-loop-helix DNA-binding domain containing protein, expressed -
6 Sobic.001G314800 hydrolase, alpha/beta fold family protein, putative, expressed -
7 Sobic.003G310500 DUF567 domain containing protein, putative, expressed -
8 Sobic.009G192100 DUF567 domain containing protein, putative, expressed -
9 Sobic.008G038100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
10 Sobic.006G014700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Cinnamyl alcohol dehydrogenase(PubMedID : 28606901)@Cinnamyl alcohol dehydrogenase(PubMedID : 19087955)@dehydrogenase, putative, expressed K00083: cinnamyl-alcohol dehydrogenase
11 Sobic.003G213900 expressed protein -
12 Sobic.010G214200 OsFBK17 - F-box domain and kelch repeat containing protein, expressed -
13 Sobic.003G296300 WRKY13, expressed -
14 Sobic.008G181300 expressed protein -
15 Sobic.004G195800 heavy metal associated domain containing protein, expressed -
16 Sobic.009G014600 Lipase class 3 family protein (At)(PubMedID : 27208977)@phospholipase, putative, expressed -
17 Sobic.004G209500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
18 Sobic.009G067400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
19 Sobic.009G038000 expressed protein -
20 Sobic.002G216500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cytochrome P450, putative, expressed -


Gene co-expression network
sample Sobic002G407200 Sobic002G407200 Sobic008G018600 Sobic008G018600 Sobic002G407200--Sobic008G018600 Sobic001G056500 Sobic001G056500 Sobic002G407200--Sobic001G056500 Sobic009G216050 Sobic009G216050 Sobic002G407200--Sobic009G216050 Sobic004G217700 Sobic004G217700 Sobic002G407200--Sobic004G217700 Sobic004G101000 Sobic004G101000 Sobic002G407200--Sobic004G101000 Sobic001G314800 Sobic001G314800 Sobic002G407200--Sobic001G314800 Sobic003G310500 Sobic003G310500 Sobic002G407200--Sobic003G310500 Sobic009G192100 Sobic009G192100 Sobic002G407200--Sobic009G192100 Sobic008G038100 Sobic008G038100 Sobic002G407200--Sobic008G038100 Sobic008G018600--Sobic002G407200 Sobic008G018600--Sobic001G056500 Sobic004G195800 Sobic004G195800 Sobic008G018600--Sobic004G195800 Sobic008G018600--Sobic009G216050 Sobic010G214200 Sobic010G214200 Sobic008G018600--Sobic010G214200 Sobic008G018600--Sobic004G217700 Sobic008G018600--Sobic001G314800 Sobic008G181300 Sobic008G181300 Sobic008G018600--Sobic008G181300 Sobic001G182600 Sobic001G182600 Sobic008G018600--Sobic001G182600 Sobic009G014600 Sobic009G014600 Sobic001G056500--Sobic009G014600 Sobic005G182701 Sobic005G182701 Sobic001G056500--Sobic005G182701 Sobic007G055600 Sobic007G055600 Sobic001G056500--Sobic007G055600 Sobic001G056400 Sobic001G056400 Sobic001G056500--Sobic001G056400 Sobic001G056500--Sobic004G217700 Sobic007G076000 Sobic007G076000 Sobic001G056500--Sobic007G076000 Sobic002G423600 Sobic002G423600 Sobic001G056500--Sobic002G423600 Sobic006G005500 Sobic006G005500 Sobic001G056500--Sobic006G005500 Sobic001G125700 Sobic001G125700 Sobic001G056500--Sobic001G125700 Sobic004G209500 Sobic004G209500 Sobic009G216050--Sobic004G209500 Sobic006G045000 Sobic006G045000 Sobic009G216050--Sobic006G045000 Sobic009G067400 Sobic009G067400 Sobic009G216050--Sobic009G067400 Sobic009G216050--Sobic004G101000 Sobic009G216050--Sobic004G217700 Sobic004G174000 Sobic004G174000 Sobic009G216050--Sobic004G174000 SobicK044407 SobicK044407 Sobic009G216050--SobicK044407 Sobic009G216050--Sobic002G407200 Sobic008G181801 Sobic008G181801 Sobic009G216050--Sobic008G181801 Sobic004G217700--Sobic002G423600 Sobic004G217700--Sobic001G056500 Sobic004G217700--Sobic001G056400 Sobic003G378301 Sobic003G378301 Sobic004G217700--Sobic003G378301 Sobic004G217700--Sobic005G182701 Sobic004G217700--SobicK044407 Sobic004G217700--Sobic006G045000 Sobic001G410450 Sobic001G410450 Sobic004G217700--Sobic001G410450 Sobic002G041800 Sobic002G041800 Sobic004G217700--Sobic002G041800 Sobic001G345400 Sobic001G345400 Sobic004G101000--Sobic001G345400 Sobic004G101000--Sobic009G216050 Sobic003G296300 Sobic003G296300 Sobic004G101000--Sobic003G296300 Sobic009G038000 Sobic009G038000 Sobic004G101000--Sobic009G038000 Sobic004G101000--Sobic002G407200 Sobic004G101000--Sobic010G214200 Sobic004G101000--Sobic001G314800 Sobic001G195100 Sobic001G195100 Sobic004G101000--Sobic001G195100 Sobic004G101000--Sobic003G310500 Sobic001G314800--Sobic001G195100 Sobic006G014700 Sobic006G014700 Sobic001G314800--Sobic006G014700 Sobic006G265000 Sobic006G265000 Sobic001G314800--Sobic006G265000 Sobic001G088300 Sobic001G088300 Sobic001G314800--Sobic001G088300 Sobic001G314800--Sobic002G407200 Sobic001G314800--Sobic008G018600 Sobic001G314800--Sobic003G296300 Sobic001G314800--Sobic003G310500 Sobic001G314800--Sobic008G181300 Sobic003G310500--Sobic001G056500 Sobic003G310500--Sobic008G038100 Sobic003G310500--Sobic004G209500 Sobic003G310500--Sobic010G214200 Sobic003G310500--Sobic009G216050 Sobic002G216500 Sobic002G216500 Sobic003G310500--Sobic002G216500 Sobic003G310500--Sobic006G045000 Sobic003G310500--Sobic008G181300 Sobic003G310500--Sobic006G014700 Sobic009G192100--Sobic008G181300 Sobic009G192100--Sobic002G407200 Sobic001G518800 Sobic001G518800 Sobic009G192100--Sobic001G518800 Sobic009G192100--Sobic008G018600 Sobic009G192100--Sobic001G182600 Sobic009G192100--Sobic008G038100 Sobic009G192100--Sobic001G345400 Sobic009G192100--Sobic001G056500 Sobic002G403300 Sobic002G403300 Sobic009G192100--Sobic002G403300 Sobic008G038100--Sobic001G056500 Sobic008G038100--Sobic003G310500 Sobic008G038100--Sobic009G216050 Sobic008G038100--Sobic009G014600 Sobic009G233900 Sobic009G233900 Sobic008G038100--Sobic009G233900 Sobic008G038100--Sobic008G181300 Sobic008G038100--Sobic004G217700 Sobic003G385500 Sobic003G385500 Sobic008G038100--Sobic003G385500 Sobic008G038100--Sobic006G045000
Octagon: transcription factors


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