Gene annotation
Transcriptome id Sobic.008G018600.1
Synonym Sb08g001610
Functional annotation harpin-induced protein 1 domain containing protein, expressed
UniProt C5YQP2
Pfam PF03168
Panther DB PTHR31852 PTHR31852:SF42
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G21130 : Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family
RAP-DB (Rice) LOC_Os12g03370.1 : harpin-induced protein 1 domain containing protein, expressed
MaizeGDB (Corn) Zm00025a013134 , Zm00025a053723
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G407200 sex determination protein tasselseed-2, putative, expressed -
2 Sobic.001G056500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@indole-3-glycerol phosphate lyase, chloroplast precursor, putative, expressed K13222: BX1, indole-3-glycerol-phosphate lyase
3 Sobic.004G195800 heavy metal associated domain containing protein, expressed -
4 Sobic.009G216050 - -
5 Sobic.010G214200 OsFBK17 - F-box domain and kelch repeat containing protein, expressed -
6 Sobic.004G217700 enzyme of the cupin superfamily protein, putative, expressed K06995: uncharacterized protein
7 Sobic.001G314800 hydrolase, alpha/beta fold family protein, putative, expressed -
8 Sobic.008G181300 expressed protein -
9 Sobic.001G182600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@GDSL-like lipase/acylhydrolase, putative, expressed -
10 Sobic.003G310500 DUF567 domain containing protein, putative, expressed -
11 Sobic.004G209500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
12 Sobic.002G209100 glutamate receptor, putative, expressed -
13 Sobic.001G518800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@AMP-binding domain containing protein, expressed -
14 Sobic.009G233900 dehydrogenase, putative, expressed -
15 Sobic.009G192100 DUF567 domain containing protein, putative, expressed -
16 Sobic.006G014700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Cinnamyl alcohol dehydrogenase(PubMedID : 28606901)@Cinnamyl alcohol dehydrogenase(PubMedID : 19087955)@dehydrogenase, putative, expressed K00083: cinnamyl-alcohol dehydrogenase
17 Sobic.002G041800 gibberellin receptor GID1L2, putative, expressed -
18 Sobic.008G038100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
19 Sobic.002G423600 "Expressed in drought, cold and heat"(PubMedID : 29862293)@similar to WSI76 protein induced by water stress(PubMedID : 29862293)@glycosyl transferase 8 domain containing protein, putative, expressed K18819: inositol 3-alpha-galactosyltransferase
20 Sobic.001G449800 OsWAK25 - OsWAK receptor-like protein kinase, expressed -


Gene co-expression network
sample Sobic008G018600 Sobic008G018600 Sobic002G407200 Sobic002G407200 Sobic008G018600--Sobic002G407200 Sobic001G056500 Sobic001G056500 Sobic008G018600--Sobic001G056500 Sobic004G195800 Sobic004G195800 Sobic008G018600--Sobic004G195800 Sobic009G216050 Sobic009G216050 Sobic008G018600--Sobic009G216050 Sobic010G214200 Sobic010G214200 Sobic008G018600--Sobic010G214200 Sobic004G217700 Sobic004G217700 Sobic008G018600--Sobic004G217700 Sobic001G314800 Sobic001G314800 Sobic008G018600--Sobic001G314800 Sobic008G181300 Sobic008G181300 Sobic008G018600--Sobic008G181300 Sobic001G182600 Sobic001G182600 Sobic008G018600--Sobic001G182600 Sobic002G407200--Sobic008G018600 Sobic002G407200--Sobic001G056500 Sobic002G407200--Sobic009G216050 Sobic002G407200--Sobic004G217700 Sobic004G101000 Sobic004G101000 Sobic002G407200--Sobic004G101000 Sobic002G407200--Sobic001G314800 Sobic003G310500 Sobic003G310500 Sobic002G407200--Sobic003G310500 Sobic009G192100 Sobic009G192100 Sobic002G407200--Sobic009G192100 Sobic008G038100 Sobic008G038100 Sobic002G407200--Sobic008G038100 Sobic009G014600 Sobic009G014600 Sobic001G056500--Sobic009G014600 Sobic005G182701 Sobic005G182701 Sobic001G056500--Sobic005G182701 Sobic007G055600 Sobic007G055600 Sobic001G056500--Sobic007G055600 Sobic001G056400 Sobic001G056400 Sobic001G056500--Sobic001G056400 Sobic001G056500--Sobic004G217700 Sobic007G076000 Sobic007G076000 Sobic001G056500--Sobic007G076000 Sobic002G423600 Sobic002G423600 Sobic001G056500--Sobic002G423600 Sobic006G005500 Sobic006G005500 Sobic001G056500--Sobic006G005500 Sobic001G125700 Sobic001G125700 Sobic001G056500--Sobic001G125700 Sobic002G209100 Sobic002G209100 Sobic004G195800--Sobic002G209100 Sobic002G041800 Sobic002G041800 Sobic004G195800--Sobic002G041800 Sobic005G085500 Sobic005G085500 Sobic004G195800--Sobic005G085500 Sobic009G252100 Sobic009G252100 Sobic004G195800--Sobic009G252100 Sobic010G120800 Sobic010G120800 Sobic004G195800--Sobic010G120800 Sobic004G195800--Sobic004G217700 Sobic001G201800 Sobic001G201800 Sobic004G195800--Sobic001G201800 Sobic004G187300 Sobic004G187300 Sobic004G195800--Sobic004G187300 Sobic005G193600 Sobic005G193600 Sobic004G195800--Sobic005G193600 Sobic004G209500 Sobic004G209500 Sobic009G216050--Sobic004G209500 Sobic006G045000 Sobic006G045000 Sobic009G216050--Sobic006G045000 Sobic009G067400 Sobic009G067400 Sobic009G216050--Sobic009G067400 Sobic009G216050--Sobic004G101000 Sobic009G216050--Sobic004G217700 Sobic004G174000 Sobic004G174000 Sobic009G216050--Sobic004G174000 SobicK044407 SobicK044407 Sobic009G216050--SobicK044407 Sobic009G216050--Sobic002G407200 Sobic008G181801 Sobic008G181801 Sobic009G216050--Sobic008G181801 Sobic010G214200--Sobic006G045000 Sobic010G214200--Sobic004G209500 Sobic010G214200--Sobic004G217700 Sobic010G214200--Sobic001G056500 Sobic002G216500 Sobic002G216500 Sobic010G214200--Sobic002G216500 Sobic010G214200--Sobic004G195800 Sobic010G214200--Sobic002G423600 Sobic010G214200--Sobic003G310500 Sobic010G214200--SobicK044407 Sobic004G217700--Sobic002G423600 Sobic004G217700--Sobic001G056500 Sobic004G217700--Sobic001G056400 Sobic003G378301 Sobic003G378301 Sobic004G217700--Sobic003G378301 Sobic004G217700--Sobic005G182701 Sobic004G217700--SobicK044407 Sobic004G217700--Sobic006G045000 Sobic001G410450 Sobic001G410450 Sobic004G217700--Sobic001G410450 Sobic004G217700--Sobic002G041800 Sobic001G195100 Sobic001G195100 Sobic001G314800--Sobic001G195100 Sobic006G014700 Sobic006G014700 Sobic001G314800--Sobic006G014700 Sobic006G265000 Sobic006G265000 Sobic001G314800--Sobic006G265000 Sobic001G088300 Sobic001G088300 Sobic001G314800--Sobic001G088300 Sobic001G314800--Sobic002G407200 Sobic001G314800--Sobic008G018600 Sobic003G296300 Sobic003G296300 Sobic001G314800--Sobic003G296300 Sobic001G314800--Sobic003G310500 Sobic001G314800--Sobic008G181300 Sobic008G181300--Sobic009G192100 Sobic008G181300--Sobic003G310500 Sobic009G233900 Sobic009G233900 Sobic008G181300--Sobic009G233900 Sobic008G181300--Sobic008G038100 Sobic008G181300--Sobic008G018600 Sobic008G181300--Sobic001G314800 Sobic008G181300--Sobic002G407200 Sobic008G181300--Sobic009G216050 Sobic008G181300--Sobic004G209500 Sobic001G182600--Sobic008G018600 Sobic001G093900 Sobic001G093900 Sobic001G182600--Sobic001G093900 Sobic009G038200 Sobic009G038200 Sobic001G182600--Sobic009G038200 Sobic001G182600--Sobic009G192100 Sobic001G182600--Sobic008G181300 Sobic001G449800 Sobic001G449800 Sobic001G182600--Sobic001G449800 Sobic005G190900 Sobic005G190900 Sobic001G182600--Sobic005G190900 Sobic001G182600--Sobic009G233900 Sobic006G078500 Sobic006G078500 Sobic001G182600--Sobic006G078500
Octagon: transcription factors


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