Gene annotation
Transcriptome id Sobic.001G182600.1
Synonym Sb01g015890
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
GDSL-like lipase/acylhydrolase, putative, expressed
UniProt A0A1B6QJM0
Pfam PF00657
Panther DB PTHR22835 PTHR22835:SF150
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0016788; hydrolase activity, acting on ester bonds


Orthologs (automatic annotation)
TAIR AT5G55050 : GDSL-like Lipase/Acylhydrolase superfamily protein
RAP-DB (Rice) LOC_Os03g38470.1 : GDSL-like lipase/acylhydrolase, putative, expressed
MaizeGDB (Corn) Zm00025a007101
Brachypodium KQK14340 , KQK14339
Barley HORVU5Hr1G110140.1 , HORVU5Hr1G110300.2 , HORVU5Hr1G110300.3 , HORVU5Hr1G110300.1 , HORVU5Hr1G110050.1 , HORVU5Hr1G110050.2 , HORVU1Hr1G087830.2 , HORVU1Hr1G087830.1
Wheat TraesCS5B02G469400 , TraesCS5D02G470800 , TraesCS5D02G472200 , TraesCS5B02G470300 , TraesCS3D02G518900 , TraesCS5A02G459700 , TraesCS5A02G460500 , TraesCS5D02G470900
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G018600 harpin-induced protein 1 domain containing protein, expressed -
2 Sobic.001G093900 stem-specific protein TSJT1, putative, expressed -
3 Sobic.009G038200 expressed protein -
4 Sobic.009G192100 DUF567 domain containing protein, putative, expressed -
5 Sobic.008G181300 expressed protein -
6 Sobic.001G449800 OsWAK25 - OsWAK receptor-like protein kinase, expressed -
7 Sobic.005G190900 MBTB64 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed K10523: speckle-type POZ protein
8 Sobic.009G233900 dehydrogenase, putative, expressed -
9 Sobic.006G078500 abscisic stress-ripening, putative, expressed -
10 Sobic.001G520100 MLO domain containing protein, putative, expressed K08472: mlo protein
11 Sobic.003G296300 WRKY13, expressed -
12 Sobic.009G153200 U-box domain containing protein, expressed -
13 Sobic.001G024500 uncharacterized Cys-rich domain containing protein, putative, expressed -
14 Sobic.005G161100 expressed protein -
15 Sobic.008G038100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
16 Sobic.005G063900 expressed protein -
17 Sobic.001G056500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@indole-3-glycerol phosphate lyase, chloroplast precursor, putative, expressed K13222: BX1, indole-3-glycerol-phosphate lyase
18 Sobic.002G269400 "Phylogenetic analysis of canonical DREB1 and DREB2 genes in sorghum with those genes in maize, rice, and Arabidopsis. "(PubMedID : 24086146)@ Relatively high abundance in cold tolerant sorghum under cold stress(PubMedID : 26645959)@Not investigated(PubMedID : 23766026)@key regulator in cold signaling pathway (Arabidopsis)(PubMedID : 16244905)@highly upregulated during chilling in a chilling tolerant sorghum NSG(PubMedID : 29293808)@dehydration-responsive element-binding protein, putative, expressed -
19 Sobic.002G407200 sex determination protein tasselseed-2, putative, expressed -
20 Sobic.003G262100 expressed protein -


Gene co-expression network
sample Sobic001G182600 Sobic001G182600 Sobic008G018600 Sobic008G018600 Sobic001G182600--Sobic008G018600 Sobic001G093900 Sobic001G093900 Sobic001G182600--Sobic001G093900 Sobic009G038200 Sobic009G038200 Sobic001G182600--Sobic009G038200 Sobic009G192100 Sobic009G192100 Sobic001G182600--Sobic009G192100 Sobic008G181300 Sobic008G181300 Sobic001G182600--Sobic008G181300 Sobic001G449800 Sobic001G449800 Sobic001G182600--Sobic001G449800 Sobic005G190900 Sobic005G190900 Sobic001G182600--Sobic005G190900 Sobic009G233900 Sobic009G233900 Sobic001G182600--Sobic009G233900 Sobic006G078500 Sobic006G078500 Sobic001G182600--Sobic006G078500 Sobic002G407200 Sobic002G407200 Sobic008G018600--Sobic002G407200 Sobic001G056500 Sobic001G056500 Sobic008G018600--Sobic001G056500 Sobic004G195800 Sobic004G195800 Sobic008G018600--Sobic004G195800 Sobic009G216050 Sobic009G216050 Sobic008G018600--Sobic009G216050 Sobic010G214200 Sobic010G214200 Sobic008G018600--Sobic010G214200 Sobic004G217700 Sobic004G217700 Sobic008G018600--Sobic004G217700 Sobic001G314800 Sobic001G314800 Sobic008G018600--Sobic001G314800 Sobic008G018600--Sobic008G181300 Sobic008G018600--Sobic001G182600 Sobic003G296300 Sobic003G296300 Sobic001G093900--Sobic003G296300 Sobic001G530350 Sobic001G530350 Sobic001G093900--Sobic001G530350 Sobic001G024500 Sobic001G024500 Sobic001G093900--Sobic001G024500 Sobic001G093900--Sobic001G182600 Sobic006G167800 Sobic006G167800 Sobic001G093900--Sobic006G167800 Sobic002G376000 Sobic002G376000 Sobic001G093900--Sobic002G376000 Sobic001G526000 Sobic001G526000 Sobic001G093900--Sobic001G526000 Sobic001G075000 Sobic001G075000 Sobic001G093900--Sobic001G075000 Sobic003G013600 Sobic003G013600 Sobic001G093900--Sobic003G013600 Sobic003G284300 Sobic003G284300 Sobic009G038200--Sobic003G284300 Sobic005G063900 Sobic005G063900 Sobic009G038200--Sobic005G063900 Sobic001G321600 Sobic001G321600 Sobic009G038200--Sobic001G321600 Sobic001G019300 Sobic001G019300 Sobic009G038200--Sobic001G019300 Sobic009G038200--Sobic005G190900 Sobic009G038200--Sobic001G449800 Sobic002G209100 Sobic002G209100 Sobic009G038200--Sobic002G209100 Sobic009G153200 Sobic009G153200 Sobic009G038200--Sobic009G153200 Sobic002G041800 Sobic002G041800 Sobic009G038200--Sobic002G041800 Sobic009G192100--Sobic008G181300 Sobic009G192100--Sobic002G407200 Sobic001G518800 Sobic001G518800 Sobic009G192100--Sobic001G518800 Sobic009G192100--Sobic008G018600 Sobic009G192100--Sobic001G182600 Sobic008G038100 Sobic008G038100 Sobic009G192100--Sobic008G038100 Sobic001G345400 Sobic001G345400 Sobic009G192100--Sobic001G345400 Sobic009G192100--Sobic001G056500 Sobic002G403300 Sobic002G403300 Sobic009G192100--Sobic002G403300 Sobic008G181300--Sobic009G192100 Sobic003G310500 Sobic003G310500 Sobic008G181300--Sobic003G310500 Sobic008G181300--Sobic009G233900 Sobic008G181300--Sobic008G038100 Sobic008G181300--Sobic008G018600 Sobic008G181300--Sobic001G314800 Sobic008G181300--Sobic002G407200 Sobic008G181300--Sobic009G216050 Sobic004G209500 Sobic004G209500 Sobic008G181300--Sobic004G209500 Sobic001G449800--Sobic002G041800 Sobic001G449800--Sobic004G217700 Sobic001G449800--Sobic009G233900 Sobic001G449800--Sobic004G195800 Sobic010G225500 Sobic010G225500 Sobic001G449800--Sobic010G225500 Sobic001G449800--Sobic009G038200 Sobic001G432500 Sobic001G432500 Sobic001G449800--Sobic001G432500 Sobic004G078600 Sobic004G078600 Sobic001G449800--Sobic004G078600 Sobic002G423600 Sobic002G423600 Sobic001G449800--Sobic002G423600 Sobic005G190900--Sobic001G019300 Sobic001G291500 Sobic001G291500 Sobic005G190900--Sobic001G291500 Sobic002G265400 Sobic002G265400 Sobic005G190900--Sobic002G265400 Sobic005G190900--Sobic001G432500 Sobic003G106500 Sobic003G106500 Sobic005G190900--Sobic003G106500 Sobic005G190900--Sobic005G063900 Sobic003G135800 Sobic003G135800 Sobic005G190900--Sobic003G135800 Sobic005G190900--Sobic010G225500 Sobic002G371900 Sobic002G371900 Sobic005G190900--Sobic002G371900 Sobic009G233900--Sobic001G056500 Sobic009G075100 Sobic009G075100 Sobic009G233900--Sobic009G075100 Sobic009G233900--Sobic004G209500 Sobic009G233900--Sobic002G423600 Sobic009G233900--Sobic004G078600 Sobic009G233900--Sobic004G217700 Sobic001G201800 Sobic001G201800 Sobic009G233900--Sobic001G201800 Sobic009G233900--Sobic001G449800 Sobic009G115400 Sobic009G115400 Sobic009G233900--Sobic009G115400 Sobic004G143801 Sobic004G143801 Sobic006G078500--Sobic004G143801 Sobic009G014600 Sobic009G014600 Sobic006G078500--Sobic009G014600 Sobic008G049200 Sobic008G049200 Sobic006G078500--Sobic008G049200 Sobic002G391700 Sobic002G391700 Sobic006G078500--Sobic002G391700 Sobic002G298400 Sobic002G298400 Sobic006G078500--Sobic002G298400 Sobic002G093600 Sobic002G093600 Sobic006G078500--Sobic002G093600 Sobic002G040400 Sobic002G040400 Sobic006G078500--Sobic002G040400 Sobic002G087500 Sobic002G087500 Sobic006G078500--Sobic002G087500 Sobic008G077800 Sobic008G077800 Sobic006G078500--Sobic008G077800
Octagon: transcription factors


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