Gene annotation
Transcriptome id Sobic.005G161100.3,Sobic.005G161100.4,Sobic.005G161100.1
Synonym Sb05g022280
Functional annotation expressed protein
UniProt C5Y4W6 , A0A1B6PSV1
Pfam PF04578 PF13968 PF13968 PF04578
Panther DB PTHR31325 PTHR31325:SF39
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G45480 : Protein of unknown function (DUF594)
RAP-DB (Rice) LOC_Os07g16930.1 : expressed protein
MaizeGDB (Corn) Zm00025a033857 , Zm00025a033859 , Zm00025a033881
Brachypodium PNT78203 , PNT78225 , PNT78226
Barley HORVU7Hr1G002020.1
Wheat TraesCS5D02G355000 , TraesCS5D02G544100 , TraesCS5D02G371000 , TraesCS5B02G364800 , TraesCS7A02G543200 , TraesCS5D02G370800 , TraesCS5D02G370800 , TraesCS5B02G364500
Populus -


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cDNA sequences
Sobic.005G161100


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G093900 stem-specific protein TSJT1, putative, expressed -
2 Sobic.001G024500 uncharacterized Cys-rich domain containing protein, putative, expressed -
3 Sobic.009G025900 "domain confirmed by Pfam database, expressed in leaf and root, expression induced by IAA treatment"(PubMedID : 20499123)@DUF260 domain containing protein, putative, expressed -
4 Sobic.008G113000 Ser/Thr protein phosphatase family protein, putative, expressed -
5 Sobic.001G182600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@GDSL-like lipase/acylhydrolase, putative, expressed -
6 Sobic.006G246100 one cut domain family member 3, putative, expressed -
7 Sobic.004G010300 glycerol-3-phosphate acyltransferase, putative, expressed K13508: glycerol-3-phosphate acyltransferase
8 Sobic.009G065300 expressed protein -
9 Sobic.001G403300 cyclase/dehydrase family protein, putative, expressed K14496: abscisic acid receptor PYR/PYL family
10 Sobic.009G232266 - -
11 Sobic.001G234800 inorganic phosphate transporter, putative, expressed K08176: MFS transporter, PHS family, inorganic phosphate transporter
12 Sobic.002G067300 ATPase, putative, expressed -
13 Sobic.005G155600 LYK, putative, expressed -
14 Sobic.002G319100 hsp20/alpha crystallin family protein, putative, expressed K13993: HSP20 family protein
15 Sobic.001G530350 - -
16 Sobic.003G360200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@homeobox domain containing protein, expressed -
17 Sobic.005G000100 monoglyceride lipase, putative, expressed -
18 Sobic.003G296300 WRKY13, expressed -
19 Sobic.001G345400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@ring-H2 zinc finger protein, putative, expressed -
20 Sobic.001G225600 expressed protein -


Gene co-expression network
sample Sobic005G161100 Sobic005G161100 Sobic001G093900 Sobic001G093900 Sobic005G161100--Sobic001G093900 Sobic001G024500 Sobic001G024500 Sobic005G161100--Sobic001G024500 Sobic009G025900 Sobic009G025900 Sobic005G161100--Sobic009G025900 Sobic008G113000 Sobic008G113000 Sobic005G161100--Sobic008G113000 Sobic001G182600 Sobic001G182600 Sobic005G161100--Sobic001G182600 Sobic006G246100 Sobic006G246100 Sobic005G161100--Sobic006G246100 Sobic004G010300 Sobic004G010300 Sobic005G161100--Sobic004G010300 Sobic009G065300 Sobic009G065300 Sobic005G161100--Sobic009G065300 Sobic001G403300 Sobic001G403300 Sobic005G161100--Sobic001G403300 Sobic003G296300 Sobic003G296300 Sobic001G093900--Sobic003G296300 Sobic001G530350 Sobic001G530350 Sobic001G093900--Sobic001G530350 Sobic001G093900--Sobic001G024500 Sobic001G093900--Sobic001G182600 Sobic006G167800 Sobic006G167800 Sobic001G093900--Sobic006G167800 Sobic002G376000 Sobic002G376000 Sobic001G093900--Sobic002G376000 Sobic001G526000 Sobic001G526000 Sobic001G093900--Sobic001G526000 Sobic001G075000 Sobic001G075000 Sobic001G093900--Sobic001G075000 Sobic003G013600 Sobic003G013600 Sobic001G093900--Sobic003G013600 Sobic001G024500--Sobic001G093900 Sobic008G002700 Sobic008G002700 Sobic001G024500--Sobic008G002700 Sobic007G220700 Sobic007G220700 Sobic001G024500--Sobic007G220700 Sobic001G024500--Sobic002G376000 Sobic010G179800 Sobic010G179800 Sobic001G024500--Sobic010G179800 Sobic003G075000 Sobic003G075000 Sobic001G024500--Sobic003G075000 Sobic001G024500--Sobic001G075000 Sobic001G024500--Sobic005G161100 Sobic001G024500--Sobic001G182600 Sobic009G025900--Sobic006G246100 Sobic002G319100 Sobic002G319100 Sobic009G025900--Sobic002G319100 Sobic009G025900--Sobic004G010300 Sobic001G131400 Sobic001G131400 Sobic009G025900--Sobic001G131400 Sobic001G346000 Sobic001G346000 Sobic009G025900--Sobic001G346000 Sobic007G025500 Sobic007G025500 Sobic009G025900--Sobic007G025500 Sobic001G052000 Sobic001G052000 Sobic009G025900--Sobic001G052000 Sobic004G179600 Sobic004G179600 Sobic009G025900--Sobic004G179600 Sobic009G025900--Sobic005G161100 Sobic008G113000--Sobic002G319100 Sobic003G041600 Sobic003G041600 Sobic008G113000--Sobic003G041600 Sobic008G113000--Sobic007G025500 Sobic003G162700 Sobic003G162700 Sobic008G113000--Sobic003G162700 Sobic010G166500 Sobic010G166500 Sobic008G113000--Sobic010G166500 Sobic002G345850 Sobic002G345850 Sobic008G113000--Sobic002G345850 Sobic002G302500 Sobic002G302500 Sobic008G113000--Sobic002G302500 Sobic010G178200 Sobic010G178200 Sobic008G113000--Sobic010G178200 Sobic001G091600 Sobic001G091600 Sobic008G113000--Sobic001G091600 Sobic008G018600 Sobic008G018600 Sobic001G182600--Sobic008G018600 Sobic001G182600--Sobic001G093900 Sobic009G038200 Sobic009G038200 Sobic001G182600--Sobic009G038200 Sobic009G192100 Sobic009G192100 Sobic001G182600--Sobic009G192100 Sobic008G181300 Sobic008G181300 Sobic001G182600--Sobic008G181300 Sobic001G449800 Sobic001G449800 Sobic001G182600--Sobic001G449800 Sobic005G190900 Sobic005G190900 Sobic001G182600--Sobic005G190900 Sobic009G233900 Sobic009G233900 Sobic001G182600--Sobic009G233900 Sobic006G078500 Sobic006G078500 Sobic001G182600--Sobic006G078500 Sobic006G246100--Sobic003G296300 Sobic005G080200 Sobic005G080200 Sobic006G246100--Sobic005G080200 Sobic010G194300 Sobic010G194300 Sobic006G246100--Sobic010G194300 Sobic006G246100--Sobic002G319100 Sobic001G345400 Sobic001G345400 Sobic006G246100--Sobic001G345400 Sobic004G114400 Sobic004G114400 Sobic006G246100--Sobic004G114400 Sobic006G246100--Sobic004G010300 Sobic010G194900 Sobic010G194900 Sobic006G246100--Sobic010G194900 Sobic004G195000 Sobic004G195000 Sobic006G246100--Sobic004G195000 Sobic003G277500 Sobic003G277500 Sobic004G010300--Sobic003G277500 Sobic001G536500 Sobic001G536500 Sobic004G010300--Sobic001G536500 Sobic004G010300--Sobic009G065300 Sobic002G070200 Sobic002G070200 Sobic004G010300--Sobic002G070200 Sobic004G186500 Sobic004G186500 Sobic004G010300--Sobic004G186500 Sobic004G010300--Sobic003G162700 Sobic009G230100 Sobic009G230100 Sobic004G010300--Sobic009G230100 Sobic006G044932 Sobic006G044932 Sobic004G010300--Sobic006G044932 Sobic004G010300--Sobic010G194300 Sobic002G327300 Sobic002G327300 Sobic009G065300--Sobic002G327300 Sobic001G234800 Sobic001G234800 Sobic009G065300--Sobic001G234800 Sobic002G327100 Sobic002G327100 Sobic009G065300--Sobic002G327100 Sobic003G228200 Sobic003G228200 Sobic009G065300--Sobic003G228200 Sobic003G416300 Sobic003G416300 Sobic009G065300--Sobic003G416300 Sobic003G037500 Sobic003G037500 Sobic009G065300--Sobic003G037500 Sobic007G127100 Sobic007G127100 Sobic009G065300--Sobic007G127100 Sobic001G318500 Sobic001G318500 Sobic009G065300--Sobic001G318500 Sobic009G065300--Sobic002G302500 Sobic001G432700 Sobic001G432700 Sobic001G403300--Sobic001G432700 Sobic001G403300--Sobic004G195000 Sobic010G195500 Sobic010G195500 Sobic001G403300--Sobic010G195500 Sobic006G068800 Sobic006G068800 Sobic001G403300--Sobic006G068800 Sobic004G207200 Sobic004G207200 Sobic001G403300--Sobic004G207200 Sobic001G403300--Sobic005G080200 Sobic003G135700 Sobic003G135700 Sobic001G403300--Sobic003G135700 Sobic001G403300--Sobic009G065300 Sobic003G384700 Sobic003G384700 Sobic001G403300--Sobic003G384700
Octagon: transcription factors


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