Gene annotation
Transcriptome id Sobic.005G155600.1
Synonym
Functional annotation LYK, putative, expressed
UniProt A0A1B6PSQ8
Pfam PF00069
Panther DB PTHR27001 PTHR27001:SF174
NCBI CDD KOG1187; Serine/threonine protein kinase
KEGG Orthology -
Gene Ontology GO:0006468; protein phosphorylation GO:0005524ATP binding GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT2G23770 : protein kinase family protein / peptidoglycan-binding LysM domain-containing protein
RAP-DB (Rice) LOC_Os11g35330.1 : LYK, putative, expressed
MaizeGDB (Corn) Zm00025a034108
Brachypodium KQJ88204
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G345400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@ring-H2 zinc finger protein, putative, expressed -
2 Sobic.009G232266 - -
3 Sobic.003G277500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@methyltransferase, putative, expressed -
4 Sobic.004G110400 RING-H2 finger protein, putative, expressed -
5 Sobic.004G195000 heavy metal transport/detoxification protein, putative, expressed -
6 Sobic.003G296300 WRKY13, expressed -
7 Sobic.006G246100 one cut domain family member 3, putative, expressed -
8 Sobic.001G357500 amino acid permease family protein, putative, expressed -
9 Sobic.004G010300 glycerol-3-phosphate acyltransferase, putative, expressed K13508: glycerol-3-phosphate acyltransferase
10 Sobic.009G121900 Annexin arabidopsis 4(PubMedID : 26320239)@annexin, putative, expressed -
11 Sobic.001G195100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cytochrome P450, putative, expressed -
12 Sobic.003G102200 helix-loop-helix DNA-binding domain containing protein, expressed -
13 Sobic.002G377100 DUF1645 domain containing protein, putative, expressed -
14 Sobic.005G080200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Ser/Thr protein phosphatase family protein, putative, expressed -
15 Sobic.004G333300 serine-rich protein, putative, expressed -
16 Sobic.002G070200 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@LTPL84 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
17 Sobic.002G407100 expressed protein -
18 Sobic.004G114400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@- -
19 Sobic.003G271201 - -
20 Sobic.008G181300 expressed protein -


Gene co-expression network
sample Sobic005G155600 Sobic005G155600 Sobic001G345400 Sobic001G345400 Sobic005G155600--Sobic001G345400 Sobic009G232266 Sobic009G232266 Sobic005G155600--Sobic009G232266 Sobic003G277500 Sobic003G277500 Sobic005G155600--Sobic003G277500 Sobic004G110400 Sobic004G110400 Sobic005G155600--Sobic004G110400 Sobic004G195000 Sobic004G195000 Sobic005G155600--Sobic004G195000 Sobic003G296300 Sobic003G296300 Sobic005G155600--Sobic003G296300 Sobic006G246100 Sobic006G246100 Sobic005G155600--Sobic006G246100 Sobic001G357500 Sobic001G357500 Sobic005G155600--Sobic001G357500 Sobic004G010300 Sobic004G010300 Sobic005G155600--Sobic004G010300 Sobic001G345400--Sobic003G296300 Sobic004G101000 Sobic004G101000 Sobic001G345400--Sobic004G101000 Sobic009G038000 Sobic009G038000 Sobic001G345400--Sobic009G038000 Sobic001G345400--Sobic005G155600 Sobic001G345400--Sobic006G246100 Sobic004G333300 Sobic004G333300 Sobic001G345400--Sobic004G333300 Sobic001G530350 Sobic001G530350 Sobic001G345400--Sobic001G530350 Sobic009G192100 Sobic009G192100 Sobic001G345400--Sobic009G192100 Sobic008G038100 Sobic008G038100 Sobic001G345400--Sobic008G038100 Sobic009G232266--Sobic001G357500 Sobic009G236800 Sobic009G236800 Sobic009G232266--Sobic009G236800 Sobic009G232266--Sobic003G277500 Sobic003G271201 Sobic003G271201 Sobic009G232266--Sobic003G271201 Sobic008G113000 Sobic008G113000 Sobic009G232266--Sobic008G113000 Sobic003G041600 Sobic003G041600 Sobic009G232266--Sobic003G041600 Sobic009G232266--Sobic005G155600 Sobic009G232266--Sobic004G010300 Sobic010G178200 Sobic010G178200 Sobic009G232266--Sobic010G178200 Sobic006G044932 Sobic006G044932 Sobic003G277500--Sobic006G044932 Sobic003G277500--Sobic004G010300 Sobic003G162700 Sobic003G162700 Sobic003G277500--Sobic003G162700 Sobic002G070200 Sobic002G070200 Sobic003G277500--Sobic002G070200 Sobic002G407700 Sobic002G407700 Sobic003G277500--Sobic002G407700 Sobic003G277500--Sobic009G232266 Sobic002G373001 Sobic002G373001 Sobic003G277500--Sobic002G373001 Sobic002G333300 Sobic002G333300 Sobic003G277500--Sobic002G333300 Sobic003G277500--Sobic004G195000 Sobic006G167800 Sobic006G167800 Sobic004G110400--Sobic006G167800 Sobic001G314800 Sobic001G314800 Sobic004G110400--Sobic001G314800 Sobic001G526000 Sobic001G526000 Sobic004G110400--Sobic001G526000 Sobic004G110400--Sobic004G333300 Sobic004G110400--Sobic005G155600 Sobic004G110400--Sobic003G296300 Sobic002G376000 Sobic002G376000 Sobic004G110400--Sobic002G376000 Sobic002G269400 Sobic002G269400 Sobic004G110400--Sobic002G269400 Sobic004G110400--Sobic001G345400 Sobic001G319200 Sobic001G319200 Sobic004G195000--Sobic001G319200 Sobic004G195000--Sobic006G246100 Sobic004G195000--Sobic003G277500 Sobic005G080200 Sobic005G080200 Sobic004G195000--Sobic005G080200 Sobic004G195000--Sobic003G296300 Sobic004G195000--Sobic002G407700 Sobic001G403300 Sobic001G403300 Sobic004G195000--Sobic001G403300 Sobic002G377100 Sobic002G377100 Sobic004G195000--Sobic002G377100 Sobic004G195000--Sobic005G155600 Sobic003G296300--Sobic001G345400 Sobic003G296300--Sobic006G246100 Sobic003G296300--Sobic004G101000 Sobic003G296300--Sobic006G167800 Sobic001G093900 Sobic001G093900 Sobic003G296300--Sobic001G093900 Sobic010G157500 Sobic010G157500 Sobic003G296300--Sobic010G157500 Sobic003G296300--Sobic009G038000 Sobic003G296300--Sobic001G526000 Sobic001G195100 Sobic001G195100 Sobic003G296300--Sobic001G195100 Sobic006G246100--Sobic003G296300 Sobic006G246100--Sobic005G080200 Sobic010G194300 Sobic010G194300 Sobic006G246100--Sobic010G194300 Sobic002G319100 Sobic002G319100 Sobic006G246100--Sobic002G319100 Sobic006G246100--Sobic001G345400 Sobic004G114400 Sobic004G114400 Sobic006G246100--Sobic004G114400 Sobic006G246100--Sobic004G010300 Sobic010G194900 Sobic010G194900 Sobic006G246100--Sobic010G194900 Sobic006G246100--Sobic004G195000 Sobic001G357500--Sobic009G232266 Sobic001G234800 Sobic001G234800 Sobic001G357500--Sobic001G234800 Sobic001G259900 Sobic001G259900 Sobic001G357500--Sobic001G259900 Sobic005G109000 Sobic005G109000 Sobic001G357500--Sobic005G109000 Sobic009G198600 Sobic009G198600 Sobic001G357500--Sobic009G198600 Sobic006G101100 Sobic006G101100 Sobic001G357500--Sobic006G101100 Sobic003G082600 Sobic003G082600 Sobic001G357500--Sobic003G082600 Sobic003G102200 Sobic003G102200 Sobic001G357500--Sobic003G102200 Sobic001G357500--Sobic003G041600 Sobic004G010300--Sobic003G277500 Sobic001G536500 Sobic001G536500 Sobic004G010300--Sobic001G536500 Sobic009G065300 Sobic009G065300 Sobic004G010300--Sobic009G065300 Sobic004G010300--Sobic002G070200 Sobic004G186500 Sobic004G186500 Sobic004G010300--Sobic004G186500 Sobic004G010300--Sobic003G162700 Sobic009G230100 Sobic009G230100 Sobic004G010300--Sobic009G230100 Sobic004G010300--Sobic006G044932 Sobic004G010300--Sobic010G194300
Octagon: transcription factors


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