Gene annotation
Transcriptome id Sobic.003G271201.1
Synonym -
Functional annotation -
UniProt A0A1W0VZ39
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G23390 : Kelch repeat-containing F-box family protein
RAP-DB (Rice) LOC_Os01g50840.1 : expressed protein
MaizeGDB (Corn) Zm00025a027869
Brachypodium KQK09384
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G206000 WRKY68, expressed -
2 Sobic.003G290300 expressed protein -
3 Sobic.009G232266 - -
4 Sobic.004G212900 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@B4-BTB1 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with B4 subfamily conserved sequence, expressed -
5 Sobic.003G162700 expressed protein -
6 Sobic.004G010300 glycerol-3-phosphate acyltransferase, putative, expressed K13508: glycerol-3-phosphate acyltransferase
7 Sobic.003G331600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@OsFBX168 - F-box domain containing protein, expressed -
8 Sobic.010G135000 thioredoxin reductase 2, putative, expressed K00384: trxB, thioredoxin reductase (NADPH)
9 Sobic.009G236800 DUF1645 domain containing protein, putative, expressed -
10 Sobic.010G274900 serine/threonine-protein kinase Cx32, chloroplast precursor, putative, expressed -
11 Sobic.003G041600 DUF623 domain containing protein, expressed -
12 Sobic.002G421600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@thioredoxin, putative, expressed -
13 Sobic.003G277500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@methyltransferase, putative, expressed -
14 Sobic.009G038100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
15 Sobic.009G230100 expressed protein -
16 Sobic.003G021500 sodium/calcium exchanger protein, putative, expressed -
17 Sobic.002G335300 uncharacterized Cys-rich domain containing protein, putative, expressed -
18 Sobic.002G369800 tentative name(PubMedID : 31536532)@histone-like transcription factor and archaeal histone, putative, expressed -
19 Sobic.002G034500 ERD4 protein, putative, expressed -
20 Sobic.001G037000 PHD finger protein, putative, expressed -


Gene co-expression network
sample Sobic003G271201 Sobic003G271201 Sobic006G206000 Sobic006G206000 Sobic003G271201--Sobic006G206000 Sobic003G290300 Sobic003G290300 Sobic003G271201--Sobic003G290300 Sobic009G232266 Sobic009G232266 Sobic003G271201--Sobic009G232266 Sobic004G212900 Sobic004G212900 Sobic003G271201--Sobic004G212900 Sobic003G162700 Sobic003G162700 Sobic003G271201--Sobic003G162700 Sobic004G010300 Sobic004G010300 Sobic003G271201--Sobic004G010300 Sobic003G331600 Sobic003G331600 Sobic003G271201--Sobic003G331600 Sobic010G135000 Sobic010G135000 Sobic003G271201--Sobic010G135000 Sobic009G236800 Sobic009G236800 Sobic003G271201--Sobic009G236800 Sobic002G302500 Sobic002G302500 Sobic006G206000--Sobic002G302500 Sobic001G234800 Sobic001G234800 Sobic006G206000--Sobic001G234800 Sobic009G074100 Sobic009G074100 Sobic006G206000--Sobic009G074100 Sobic006G158266 Sobic006G158266 Sobic006G206000--Sobic006G158266 Sobic002G326100 Sobic002G326100 Sobic006G206000--Sobic002G326100 Sobic001G367600 Sobic001G367600 Sobic006G206000--Sobic001G367600 Sobic006G157500 Sobic006G157500 Sobic006G206000--Sobic006G157500 Sobic009G230100 Sobic009G230100 Sobic006G206000--Sobic009G230100 Sobic002G327300 Sobic002G327300 Sobic006G206000--Sobic002G327300 Sobic001G032000 Sobic001G032000 Sobic003G290300--Sobic001G032000 Sobic003G290300--Sobic006G157500 Sobic002G328400 Sobic002G328400 Sobic003G290300--Sobic002G328400 Sobic003G265200 Sobic003G265200 Sobic003G290300--Sobic003G265200 Sobic002G405600 Sobic002G405600 Sobic003G290300--Sobic002G405600 Sobic003G290300--Sobic006G206000 Sobic001G481100 Sobic001G481100 Sobic003G290300--Sobic001G481100 Sobic003G202200 Sobic003G202200 Sobic003G290300--Sobic003G202200 Sobic003G290300--Sobic004G212900 Sobic001G357500 Sobic001G357500 Sobic009G232266--Sobic001G357500 Sobic009G232266--Sobic009G236800 Sobic003G277500 Sobic003G277500 Sobic009G232266--Sobic003G277500 Sobic009G232266--Sobic003G271201 Sobic008G113000 Sobic008G113000 Sobic009G232266--Sobic008G113000 Sobic003G041600 Sobic003G041600 Sobic009G232266--Sobic003G041600 Sobic005G155600 Sobic005G155600 Sobic009G232266--Sobic005G155600 Sobic009G232266--Sobic004G010300 Sobic010G178200 Sobic010G178200 Sobic009G232266--Sobic010G178200 Sobic004G212900--Sobic006G157500 Sobic007G177100 Sobic007G177100 Sobic004G212900--Sobic007G177100 Sobic003G382800 Sobic003G382800 Sobic004G212900--Sobic003G382800 Sobic010G274900 Sobic010G274900 Sobic004G212900--Sobic010G274900 Sobic002G335300 Sobic002G335300 Sobic004G212900--Sobic002G335300 Sobic004G212900--Sobic009G074100 Sobic001G477600 Sobic001G477600 Sobic004G212900--Sobic001G477600 Sobic002G291900 Sobic002G291900 Sobic004G212900--Sobic002G291900 Sobic003G357300 Sobic003G357300 Sobic004G212900--Sobic003G357300 Sobic001G067601 Sobic001G067601 Sobic003G162700--Sobic001G067601 Sobic009G070400 Sobic009G070400 Sobic003G162700--Sobic009G070400 Sobic002G333400 Sobic002G333400 Sobic003G162700--Sobic002G333400 Sobic006G158600 Sobic006G158600 Sobic003G162700--Sobic006G158600 Sobic003G334600 Sobic003G334600 Sobic003G162700--Sobic003G334600 Sobic010G238600 Sobic010G238600 Sobic003G162700--Sobic010G238600 Sobic003G162700--Sobic010G274900 Sobic007G025500 Sobic007G025500 Sobic003G162700--Sobic007G025500 Sobic008G136400 Sobic008G136400 Sobic003G162700--Sobic008G136400 Sobic004G010300--Sobic003G277500 Sobic001G536500 Sobic001G536500 Sobic004G010300--Sobic001G536500 Sobic009G065300 Sobic009G065300 Sobic004G010300--Sobic009G065300 Sobic002G070200 Sobic002G070200 Sobic004G010300--Sobic002G070200 Sobic004G186500 Sobic004G186500 Sobic004G010300--Sobic004G186500 Sobic004G010300--Sobic003G162700 Sobic004G010300--Sobic009G230100 Sobic006G044932 Sobic006G044932 Sobic004G010300--Sobic006G044932 Sobic010G194300 Sobic010G194300 Sobic004G010300--Sobic010G194300 Sobic003G331600--Sobic003G290300 Sobic003G331600--Sobic010G135000 Sobic003G331600--Sobic002G405600 Sobic003G331600--Sobic003G271201 Sobic001G037000 Sobic001G037000 Sobic003G331600--Sobic001G037000 Sobic009G023200 Sobic009G023200 Sobic003G331600--Sobic009G023200 Sobic003G181500 Sobic003G181500 Sobic003G331600--Sobic003G181500 Sobic003G331600--Sobic003G162700 Sobic002G245800 Sobic002G245800 Sobic003G331600--Sobic002G245800 Sobic003G130800 Sobic003G130800 Sobic010G135000--Sobic003G130800 Sobic006G180200 Sobic006G180200 Sobic010G135000--Sobic006G180200 Sobic002G345300 Sobic002G345300 Sobic010G135000--Sobic002G345300 Sobic010G135000--Sobic003G181500 Sobic001G459200 Sobic001G459200 Sobic010G135000--Sobic001G459200 Sobic010G135000--Sobic009G023200 Sobic003G350300 Sobic003G350300 Sobic010G135000--Sobic003G350300 Sobic004G330700 Sobic004G330700 Sobic010G135000--Sobic004G330700 Sobic009G185800 Sobic009G185800 Sobic010G135000--Sobic009G185800 Sobic009G236800--Sobic009G232266 Sobic009G236800--Sobic003G271201 Sobic009G236800--Sobic003G041600 Sobic009G236800--Sobic001G357500 Sobic002G034500 Sobic002G034500 Sobic009G236800--Sobic002G034500 Sobic009G069800 Sobic009G069800 Sobic009G236800--Sobic009G069800 Sobic009G236800--Sobic010G274900 Sobic009G236800--Sobic010G135000 Sobic001G486100 Sobic001G486100 Sobic009G236800--Sobic001G486100
Octagon: transcription factors


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