Gene annotation
Transcriptome id Sobic.003G290300.1
Synonym ATOXS3, Sb03g034090, OXS3
Functional annotation expressed protein
UniProt C5XJ75
Pfam -
Panther DB PTHR33172 PTHR33172:SF2
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G56550 : oxidative stress 3
RAP-DB (Rice) LOC_Os01g53730.1 : expressed protein
MaizeGDB (Corn) Zm00025a027665
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G032000 peptide transporter PTR2, putative, expressed -
2 Sobic.006G157500 zinc finger, C3HC4 type domain containing protein, expressed K10666: E3 ubiquitin-protein ligase RNF5
3 Sobic.002G328400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@TKL_IRAK_DUF26-lc.15 - DUF26 kinases have homology to DUF26 containing loci, expressed -
4 Sobic.003G265200 B3 DNA binding domain containing protein, expressed K09287: RAV-like factor
5 Sobic.002G405600 early response to dehydration 15, putative, expressed -
6 Sobic.006G206000 WRKY68, expressed -
7 Sobic.001G481100 DUF581 domain containing protein, expressed -
8 Sobic.003G202200 uncharacterized protein PA4923, putative, expressed K06966: pyrimidine/purine-5'-nucleotide nucleosidase
9 Sobic.004G212900 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@B4-BTB1 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with B4 subfamily conserved sequence, expressed -
10 Sobic.003G271201 - -
11 Sobic.003G331600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@OsFBX168 - F-box domain containing protein, expressed -
12 Sobic.001G037000 PHD finger protein, putative, expressed -
13 Sobic.001G431500 gibberellin receptor GID1L2, putative, expressed -
14 Sobic.004G279700 expressed protein -
15 Sobic.001G295700 Triacylglycerol lipase like protein (Os)(PubMedID : 27208977)@triacylglycerol lipase like protein, putative, expressed -
16 Sobic.005G229700 GRAS family transcription factor domain containing protein, expressed -
17 Sobic.001G259700 tran- scriptional repressor JASMONATE ZIM-DOMAIN(PubMedID : 25711704)@ZIM domain containing protein, putative, expressed K13464: jasmonate ZIM domain-containing protein
18 Sobic.003G250600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@OsGrx_I1 - glutaredoxin subgroup III, expressed -
19 Sobic.010G209200 WRKY28, expressed -
20 Sobic.002G326100 aspartic proteinase nepenthesin-1 precursor, putative, expressed -


Gene co-expression network
sample Sobic003G290300 Sobic003G290300 Sobic001G032000 Sobic001G032000 Sobic003G290300--Sobic001G032000 Sobic006G157500 Sobic006G157500 Sobic003G290300--Sobic006G157500 Sobic002G328400 Sobic002G328400 Sobic003G290300--Sobic002G328400 Sobic003G265200 Sobic003G265200 Sobic003G290300--Sobic003G265200 Sobic002G405600 Sobic002G405600 Sobic003G290300--Sobic002G405600 Sobic006G206000 Sobic006G206000 Sobic003G290300--Sobic006G206000 Sobic001G481100 Sobic001G481100 Sobic003G290300--Sobic001G481100 Sobic003G202200 Sobic003G202200 Sobic003G290300--Sobic003G202200 Sobic004G212900 Sobic004G212900 Sobic003G290300--Sobic004G212900 Sobic001G032000--Sobic003G290300 Sobic009G023200 Sobic009G023200 Sobic001G032000--Sobic009G023200 Sobic003G082600 Sobic003G082600 Sobic001G032000--Sobic003G082600 Sobic001G234800 Sobic001G234800 Sobic001G032000--Sobic001G234800 Sobic001G032000--Sobic003G202200 Sobic001G032000--Sobic002G405600 Sobic002G345850 Sobic002G345850 Sobic001G032000--Sobic002G345850 Sobic010G204600 Sobic010G204600 Sobic001G032000--Sobic010G204600 Sobic001G032000--Sobic006G206000 Sobic009G168900 Sobic009G168900 Sobic006G157500--Sobic009G168900 Sobic006G157500--Sobic003G265200 Sobic002G339100 Sobic002G339100 Sobic006G157500--Sobic002G339100 Sobic003G260300 Sobic003G260300 Sobic006G157500--Sobic003G260300 Sobic001G477600 Sobic001G477600 Sobic006G157500--Sobic001G477600 Sobic001G318700 Sobic001G318700 Sobic006G157500--Sobic001G318700 Sobic009G184000 Sobic009G184000 Sobic006G157500--Sobic009G184000 Sobic004G109900 Sobic004G109900 Sobic006G157500--Sobic004G109900 Sobic001G112200 Sobic001G112200 Sobic006G157500--Sobic001G112200 Sobic009G141500 Sobic009G141500 Sobic002G328400--Sobic009G141500 Sobic001G259700 Sobic001G259700 Sobic002G328400--Sobic001G259700 Sobic002G328400--Sobic003G265200 Sobic004G191400 Sobic004G191400 Sobic002G328400--Sobic004G191400 Sobic002G328400--Sobic003G260300 Sobic004G169200 Sobic004G169200 Sobic002G328400--Sobic004G169200 Sobic001G079300 Sobic001G079300 Sobic002G328400--Sobic001G079300 Sobic006G263600 Sobic006G263600 Sobic002G328400--Sobic006G263600 Sobic001G431500 Sobic001G431500 Sobic002G328400--Sobic001G431500 Sobic003G265200--Sobic006G157500 Sobic003G265200--Sobic003G260300 Sobic003G265200--Sobic002G328400 Sobic003G265200--Sobic001G431500 Sobic002G336600 Sobic002G336600 Sobic003G265200--Sobic002G336600 Sobic001G259900 Sobic001G259900 Sobic003G265200--Sobic001G259900 Sobic003G265200--Sobic009G184000 Sobic003G228900 Sobic003G228900 Sobic003G265200--Sobic003G228900 Sobic003G043600 Sobic003G043600 Sobic003G265200--Sobic003G043600 Sobic002G245800 Sobic002G245800 Sobic002G405600--Sobic002G245800 Sobic003G324400 Sobic003G324400 Sobic002G405600--Sobic003G324400 Sobic002G405600--Sobic003G202200 Sobic002G405600--Sobic010G204600 Sobic009G247900 Sobic009G247900 Sobic002G405600--Sobic009G247900 Sobic010G267600 Sobic010G267600 Sobic002G405600--Sobic010G267600 Sobic002G405600--Sobic006G263600 Sobic002G405600--Sobic001G259700 Sobic001G095300 Sobic001G095300 Sobic002G405600--Sobic001G095300 Sobic002G302500 Sobic002G302500 Sobic006G206000--Sobic002G302500 Sobic006G206000--Sobic001G234800 Sobic009G074100 Sobic009G074100 Sobic006G206000--Sobic009G074100 Sobic006G158266 Sobic006G158266 Sobic006G206000--Sobic006G158266 Sobic002G326100 Sobic002G326100 Sobic006G206000--Sobic002G326100 Sobic001G367600 Sobic001G367600 Sobic006G206000--Sobic001G367600 Sobic006G206000--Sobic006G157500 Sobic009G230100 Sobic009G230100 Sobic006G206000--Sobic009G230100 Sobic002G327300 Sobic002G327300 Sobic006G206000--Sobic002G327300 Sobic001G481100--Sobic003G228900 Sobic006G075400 Sobic006G075400 Sobic001G481100--Sobic006G075400 Sobic001G481100--Sobic001G318700 Sobic007G074000 Sobic007G074000 Sobic001G481100--Sobic007G074000 Sobic001G256700 Sobic001G256700 Sobic001G481100--Sobic001G256700 Sobic001G481100--Sobic003G202200 Sobic001G481100--Sobic001G079300 Sobic004G301000 Sobic004G301000 Sobic001G481100--Sobic004G301000 Sobic002G251000 Sobic002G251000 Sobic001G481100--Sobic002G251000 Sobic003G202200--Sobic001G481100 Sobic003G202200--Sobic009G247900 Sobic001G383700 Sobic001G383700 Sobic003G202200--Sobic001G383700 Sobic001G449700 Sobic001G449700 Sobic003G202200--Sobic001G449700 Sobic003G021500 Sobic003G021500 Sobic003G202200--Sobic003G021500 Sobic003G202200--Sobic003G228900 Sobic003G202200--Sobic004G191400 Sobic003G364600 Sobic003G364600 Sobic003G202200--Sobic003G364600 Sobic009G036000 Sobic009G036000 Sobic003G202200--Sobic009G036000 Sobic004G212900--Sobic006G157500 Sobic007G177100 Sobic007G177100 Sobic004G212900--Sobic007G177100 Sobic003G382800 Sobic003G382800 Sobic004G212900--Sobic003G382800 Sobic010G274900 Sobic010G274900 Sobic004G212900--Sobic010G274900 Sobic002G335300 Sobic002G335300 Sobic004G212900--Sobic002G335300 Sobic004G212900--Sobic009G074100 Sobic004G212900--Sobic001G477600 Sobic002G291900 Sobic002G291900 Sobic004G212900--Sobic002G291900 Sobic003G357300 Sobic003G357300 Sobic004G212900--Sobic003G357300
Octagon: transcription factors


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