Gene annotation
Transcriptome id Sobic.005G229700.1
Synonym Sb05g027770
Functional annotation GRAS family transcription factor domain containing protein, expressed
UniProt C5Y8L5
Pfam PF03514
Panther DB PTHR31636 PTHR31636:SF41
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G37650 : GRAS family transcription factor
RAP-DB (Rice) LOC_Os11g47870.1 : GRAS family transcription factor domain containing protein, expressed
MaizeGDB (Corn) Zm00025a029081 , Zm00025a029082
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G265200 B3 DNA binding domain containing protein, expressed K09287: RAV-like factor
2 Sobic.001G422900 zinc finger family protein, putative, expressed -
3 Sobic.002G245800 AN1-like zinc finger domain containing protein, expressed -
4 Sobic.001G037000 PHD finger protein, putative, expressed -
5 Sobic.001G399100 peroxisomal biogenesis factor 11, putative, expressed -
6 Sobic.003G181500 ZOS1-09 - C2H2 zinc finger protein, expressed -
7 Sobic.002G055600 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@glycosyl hydrolase, putative, expressed K01183: chitinase
8 Sobic.009G070400 expressed protein -
9 Sobic.002G333400 KI domain interacting kinase 1, putative, expressed -
10 Sobic.002G326100 aspartic proteinase nepenthesin-1 precursor, putative, expressed -
11 Sobic.010G107100 expressed protein -
12 Sobic.009G221400 B3 DNA binding domain containing protein, expressed K09287: RAV-like factor
13 Sobic.003G334600 NAC domain transcription factor, putative, expressed -
14 Sobic.003G417350 - -
15 Sobic.009G033700 protein kinase, putative, expressed K13436: pto-interacting protein 1
16 Sobic.009G151600 AP2 domain containing protein, expressed -
17 Sobic.009G143400 chitin-inducible gibberellin-responsive protein, putative, expressed -
18 Sobic.010G163000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@reticuline oxidase-like protein precursor, putative, expressed -
19 Sobic.003G249800 60S ribosomal protein L18a-1, putative, expressed -
20 Sobic.009G023200 glycine-rich protein A3, putative, expressed -


Gene co-expression network
sample Sobic005G229700 Sobic005G229700 Sobic003G265200 Sobic003G265200 Sobic005G229700--Sobic003G265200 Sobic001G422900 Sobic001G422900 Sobic005G229700--Sobic001G422900 Sobic002G245800 Sobic002G245800 Sobic005G229700--Sobic002G245800 Sobic001G037000 Sobic001G037000 Sobic005G229700--Sobic001G037000 Sobic001G399100 Sobic001G399100 Sobic005G229700--Sobic001G399100 Sobic003G181500 Sobic003G181500 Sobic005G229700--Sobic003G181500 Sobic002G055600 Sobic002G055600 Sobic005G229700--Sobic002G055600 Sobic009G070400 Sobic009G070400 Sobic005G229700--Sobic009G070400 Sobic002G333400 Sobic002G333400 Sobic005G229700--Sobic002G333400 Sobic006G157500 Sobic006G157500 Sobic003G265200--Sobic006G157500 Sobic003G260300 Sobic003G260300 Sobic003G265200--Sobic003G260300 Sobic002G328400 Sobic002G328400 Sobic003G265200--Sobic002G328400 Sobic001G431500 Sobic001G431500 Sobic003G265200--Sobic001G431500 Sobic002G336600 Sobic002G336600 Sobic003G265200--Sobic002G336600 Sobic001G259900 Sobic001G259900 Sobic003G265200--Sobic001G259900 Sobic009G184000 Sobic009G184000 Sobic003G265200--Sobic009G184000 Sobic003G228900 Sobic003G228900 Sobic003G265200--Sobic003G228900 Sobic003G043600 Sobic003G043600 Sobic003G265200--Sobic003G043600 Sobic001G422900--Sobic002G245800 Sobic010G204600 Sobic010G204600 Sobic001G422900--Sobic010G204600 Sobic001G422900--Sobic001G037000 Sobic001G095300 Sobic001G095300 Sobic001G422900--Sobic001G095300 Sobic001G422900--Sobic003G181500 Sobic003G249800 Sobic003G249800 Sobic001G422900--Sobic003G249800 Sobic001G422900--Sobic005G229700 Sobic002G211900 Sobic002G211900 Sobic001G422900--Sobic002G211900 Sobic002G405600 Sobic002G405600 Sobic001G422900--Sobic002G405600 Sobic002G245800--Sobic002G405600 Sobic001G040200 Sobic001G040200 Sobic002G245800--Sobic001G040200 Sobic003G324400 Sobic003G324400 Sobic002G245800--Sobic003G324400 Sobic009G247900 Sobic009G247900 Sobic002G245800--Sobic009G247900 Sobic002G245800--Sobic001G422900 Sobic009G023200 Sobic009G023200 Sobic002G245800--Sobic009G023200 Sobic002G245800--Sobic001G095300 Sobic002G140300 Sobic002G140300 Sobic002G245800--Sobic002G140300 Sobic006G179500 Sobic006G179500 Sobic002G245800--Sobic006G179500 Sobic001G037000--Sobic003G249800 Sobic003G063200 Sobic003G063200 Sobic001G037000--Sobic003G063200 Sobic001G037000--Sobic001G422900 Sobic001G037000--Sobic010G204600 Sobic001G067601 Sobic001G067601 Sobic001G037000--Sobic001G067601 Sobic009G016201 Sobic009G016201 Sobic001G037000--Sobic009G016201 Sobic001G037000--Sobic003G265200 Sobic002G205300 Sobic002G205300 Sobic001G037000--Sobic002G205300 Sobic001G037000--Sobic003G181500 Sobic009G033700 Sobic009G033700 Sobic001G399100--Sobic009G033700 Sobic009G046600 Sobic009G046600 Sobic001G399100--Sobic009G046600 Sobic010G107100 Sobic010G107100 Sobic001G399100--Sobic010G107100 Sobic004G186500 Sobic004G186500 Sobic001G399100--Sobic004G186500 Sobic003G019200 Sobic003G019200 Sobic001G399100--Sobic003G019200 Sobic009G200700 Sobic009G200700 Sobic001G399100--Sobic009G200700 Sobic005G028700 Sobic005G028700 Sobic001G399100--Sobic005G028700 Sobic001G399100--Sobic005G229700 Sobic010G086200 Sobic010G086200 Sobic001G399100--Sobic010G086200 Sobic004G187900 Sobic004G187900 Sobic003G181500--Sobic004G187900 Sobic003G350300 Sobic003G350300 Sobic003G181500--Sobic003G350300 Sobic010G149300 Sobic010G149300 Sobic003G181500--Sobic010G149300 Sobic003G181500--Sobic003G249800 Sobic001G288800 Sobic001G288800 Sobic003G181500--Sobic001G288800 Sobic001G281400 Sobic001G281400 Sobic003G181500--Sobic001G281400 Sobic003G181500--Sobic009G023200 Sobic003G181500--Sobic002G211900 Sobic002G046100 Sobic002G046100 Sobic003G181500--Sobic002G046100 Sobic004G237800 Sobic004G237800 Sobic002G055600--Sobic004G237800 Sobic005G091500 Sobic005G091500 Sobic002G055600--Sobic005G091500 Sobic008G136400 Sobic008G136400 Sobic002G055600--Sobic008G136400 Sobic004G321300 Sobic004G321300 Sobic002G055600--Sobic004G321300 Sobic004G189400 Sobic004G189400 Sobic002G055600--Sobic004G189400 Sobic002G055700 Sobic002G055700 Sobic002G055600--Sobic002G055700 Sobic003G334600 Sobic003G334600 Sobic002G055600--Sobic003G334600 Sobic002G183200 Sobic002G183200 Sobic002G055600--Sobic002G183200 Sobic004G189500 Sobic004G189500 Sobic002G055600--Sobic004G189500 Sobic010G176600 Sobic010G176600 Sobic009G070400--Sobic010G176600 Sobic001G423800 Sobic001G423800 Sobic009G070400--Sobic001G423800 Sobic002G393000 Sobic002G393000 Sobic009G070400--Sobic002G393000 Sobic009G070400--Sobic008G136400 Sobic004G301000 Sobic004G301000 Sobic009G070400--Sobic004G301000 Sobic006G158600 Sobic006G158600 Sobic009G070400--Sobic006G158600 Sobic003G286600 Sobic003G286600 Sobic009G070400--Sobic003G286600 Sobic002G140400 Sobic002G140400 Sobic009G070400--Sobic002G140400 Sobic001G038900 Sobic001G038900 Sobic009G070400--Sobic001G038900 Sobic001G407800 Sobic001G407800 Sobic002G333400--Sobic001G407800 Sobic002G333400--Sobic006G158600 Sobic006G056400 Sobic006G056400 Sobic002G333400--Sobic006G056400 Sobic002G333400--Sobic008G136400 Sobic005G186100 Sobic005G186100 Sobic002G333400--Sobic005G186100 Sobic003G369100 Sobic003G369100 Sobic002G333400--Sobic003G369100 Sobic009G151600 Sobic009G151600 Sobic002G333400--Sobic009G151600 Sobic002G333400--Sobic002G140400 Sobic007G074000 Sobic007G074000 Sobic002G333400--Sobic007G074000
Octagon: transcription factors


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