Gene annotation
Transcriptome id Sobic.002G335300.1,Sobic.002G335300.2
Synonym Sb02g036080
Functional annotation uncharacterized Cys-rich domain containing protein, putative, expressed
UniProt C5XAY8
Pfam PF04749
Panther DB PTHR15907 PTHR15907:SF36
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G11380 : PLAC8 family protein
RAP-DB (Rice) LOC_Os07g36820.1 : uncharacterized Cys-rich domain containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a048347
Brachypodium KQK15820
Barley HORVU2Hr1G042120.11 , HORVU2Hr1G042120.10 , HORVU2Hr1G042120.13 , HORVU2Hr1G042120.12 , HORVU2Hr1G042120.15 , HORVU2Hr1G042120.14 , HORVU2Hr1G042120.5 , HORVU2Hr1G042120.4 , HORVU2Hr1G042120.7 , HORVU2Hr1G042120.6 , HORVU2Hr1G042120.3 , HORVU2Hr1G042120.2 , HORVU2Hr1G042120.8
Wheat TraesCS2A02G209500 , TraesCS2D02G216200 , TraesCS2B02G235700
Populus -


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cDNA sequences
Sobic.002G335300


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G212900 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@B4-BTB1 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with B4 subfamily conserved sequence, expressed -
2 Sobic.003G344600 BAG domain containing protein, expressed -
3 Sobic.003G357300 MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
4 Sobic.001G009500 - -
5 Sobic.009G074100 prenylated rab acceptor, putative, expressed -
6 Sobic.008G103700 nitrilase-associated protein, putative, expressed K18635: protein SPIRAL1 and related proteins
7 Sobic.006G046900 expressed protein -
8 Sobic.009G243400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cinnamoyl-CoA reductase-related, putative, expressed -
9 Sobic.003G211200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Myb transcription factor, putative, expressed -
10 Sobic.002G223600 MORN repeat domain containing protein, expressed -
11 Sobic.004G301000 B-box (BBX) protein(PubMedID : 30626335)@B-box zinc finger family protein, putative, expressed -
12 Sobic.004G024300 cyclin, putative, expressed -
13 Sobic.001G483400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@lipoxygenase protein, putative, expressed K00454: lipoxygenase
14 Sobic.002G291900 RING-H2 finger protein, putative, expressed -
15 Sobic.005G229300 ribosomal protein S2, putative, expressed K02998: RP-SAe, small subunit ribosomal protein SAe
16 Sobic.008G186100 helix-loop-helix DNA-binding domain containing protein, expressed -
17 Sobic.001G254100 "PGL1(Ortholog in rice:Heang and Sassa, 2012)"(PubMedID : 31659838)@bHLH family protein, putative, expressed -
18 Sobic.009G161500 - -
19 Sobic.006G249300 expressed protein -
20 Sobic.001G169500 - -


Gene co-expression network
sample Sobic002G335300 Sobic002G335300 Sobic004G212900 Sobic004G212900 Sobic002G335300--Sobic004G212900 Sobic003G344600 Sobic003G344600 Sobic002G335300--Sobic003G344600 Sobic003G357300 Sobic003G357300 Sobic002G335300--Sobic003G357300 Sobic001G009500 Sobic001G009500 Sobic002G335300--Sobic001G009500 Sobic009G074100 Sobic009G074100 Sobic002G335300--Sobic009G074100 Sobic008G103700 Sobic008G103700 Sobic002G335300--Sobic008G103700 Sobic006G046900 Sobic006G046900 Sobic002G335300--Sobic006G046900 Sobic009G243400 Sobic009G243400 Sobic002G335300--Sobic009G243400 Sobic003G211200 Sobic003G211200 Sobic002G335300--Sobic003G211200 Sobic006G157500 Sobic006G157500 Sobic004G212900--Sobic006G157500 Sobic007G177100 Sobic007G177100 Sobic004G212900--Sobic007G177100 Sobic003G382800 Sobic003G382800 Sobic004G212900--Sobic003G382800 Sobic010G274900 Sobic010G274900 Sobic004G212900--Sobic010G274900 Sobic004G212900--Sobic002G335300 Sobic004G212900--Sobic009G074100 Sobic001G477600 Sobic001G477600 Sobic004G212900--Sobic001G477600 Sobic002G291900 Sobic002G291900 Sobic004G212900--Sobic002G291900 Sobic004G212900--Sobic003G357300 Sobic003G249800 Sobic003G249800 Sobic003G344600--Sobic003G249800 Sobic003G344600--Sobic001G009500 Sobic003G429000 Sobic003G429000 Sobic003G344600--Sobic003G429000 Sobic009G180000 Sobic009G180000 Sobic003G344600--Sobic009G180000 Sobic001G054900 Sobic001G054900 Sobic003G344600--Sobic001G054900 Sobic002G282400 Sobic002G282400 Sobic003G344600--Sobic002G282400 Sobic003G344600--Sobic002G335300 Sobic002G330000 Sobic002G330000 Sobic003G344600--Sobic002G330000 Sobic010G237000 Sobic010G237000 Sobic003G344600--Sobic010G237000 Sobic004G301000 Sobic004G301000 Sobic003G357300--Sobic004G301000 Sobic004G100700 Sobic004G100700 Sobic003G357300--Sobic004G100700 Sobic003G393900 Sobic003G393900 Sobic003G357300--Sobic003G393900 Sobic001G108200 Sobic001G108200 Sobic003G357300--Sobic001G108200 Sobic004G306300 Sobic004G306300 Sobic003G357300--Sobic004G306300 Sobic006G275200 Sobic006G275200 Sobic003G357300--Sobic006G275200 Sobic009G070400 Sobic009G070400 Sobic003G357300--Sobic009G070400 Sobic002G393000 Sobic002G393000 Sobic003G357300--Sobic002G393000 Sobic001G308300 Sobic001G308300 Sobic003G357300--Sobic001G308300 Sobic001G247600 Sobic001G247600 Sobic001G009500--Sobic001G247600 Sobic008G106700 Sobic008G106700 Sobic001G009500--Sobic008G106700 Sobic003G343900 Sobic003G343900 Sobic001G009500--Sobic003G343900 Sobic001G389000 Sobic001G389000 Sobic001G009500--Sobic001G389000 Sobic001G009500--Sobic009G074100 Sobic001G119400 Sobic001G119400 Sobic001G009500--Sobic001G119400 Sobic001G009500--Sobic004G100700 Sobic004G075000 Sobic004G075000 Sobic001G009500--Sobic004G075000 Sobic008G186100 Sobic008G186100 Sobic001G009500--Sobic008G186100 Sobic005G011300 Sobic005G011300 Sobic009G074100--Sobic005G011300 Sobic009G074100--Sobic004G100700 Sobic009G074100--Sobic004G306300 Sobic009G074100--Sobic001G389000 Sobic009G074100--Sobic003G393900 Sobic001G169500 Sobic001G169500 Sobic009G074100--Sobic001G169500 Sobic001G459800 Sobic001G459800 Sobic009G074100--Sobic001G459800 Sobic003G228900 Sobic003G228900 Sobic009G074100--Sobic003G228900 Sobic004G340900 Sobic004G340900 Sobic009G074100--Sobic004G340900 Sobic004G024300 Sobic004G024300 Sobic008G103700--Sobic004G024300 Sobic001G034700 Sobic001G034700 Sobic008G103700--Sobic001G034700 Sobic010G238800 Sobic010G238800 Sobic008G103700--Sobic010G238800 Sobic003G306100 Sobic003G306100 Sobic008G103700--Sobic003G306100 Sobic008G103700--Sobic003G344600 Sobic003G443300 Sobic003G443300 Sobic008G103700--Sobic003G443300 Sobic008G103700--Sobic002G335300 Sobic002G128800 Sobic002G128800 Sobic008G103700--Sobic002G128800 Sobic001G432000 Sobic001G432000 Sobic008G103700--Sobic001G432000 Sobic006G046900--Sobic001G169500 Sobic006G046900--Sobic005G011300 Sobic006G249300 Sobic006G249300 Sobic006G046900--Sobic006G249300 Sobic001G139100 Sobic001G139100 Sobic006G046900--Sobic001G139100 Sobic003G377100 Sobic003G377100 Sobic006G046900--Sobic003G377100 Sobic006G046900--Sobic001G459800 Sobic006G046900--Sobic008G186100 Sobic004G336500 Sobic004G336500 Sobic006G046900--Sobic004G336500 Sobic002G068600 Sobic002G068600 Sobic006G046900--Sobic002G068600 Sobic009G148100 Sobic009G148100 Sobic009G243400--Sobic009G148100 Sobic001G254100 Sobic001G254100 Sobic009G243400--Sobic001G254100 Sobic001G483400 Sobic001G483400 Sobic009G243400--Sobic001G483400 Sobic009G243400--Sobic004G024300 Sobic001G076100 Sobic001G076100 Sobic009G243400--Sobic001G076100 Sobic007G178000 Sobic007G178000 Sobic009G243400--Sobic007G178000 Sobic009G243400--Sobic006G046900 Sobic003G123600 Sobic003G123600 Sobic009G243400--Sobic003G123600 Sobic010G031300 Sobic010G031300 Sobic009G243400--Sobic010G031300 Sobic003G211200--Sobic001G009500 Sobic009G077800 Sobic009G077800 Sobic003G211200--Sobic009G077800 Sobic003G211200--Sobic003G344600 Sobic009G229000 Sobic009G229000 Sobic003G211200--Sobic009G229000 Sobic003G211200--Sobic001G247600 Sobic002G255200 Sobic002G255200 Sobic003G211200--Sobic002G255200 Sobic003G393700 Sobic003G393700 Sobic003G211200--Sobic003G393700 Sobic003G211200--Sobic002G335300 Sobic007G087200 Sobic007G087200 Sobic003G211200--Sobic007G087200
Octagon: transcription factors


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