Gene annotation
Transcriptome id Sobic.003G211200.1
Synonym Sb03g027120
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
Myb transcription factor, putative, expressed
UniProt C5XQ94
Pfam PF00249
Panther DB PTHR12374 PTHR12374:SF27
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G47390 : myb-like transcription factor family protein
RAP-DB (Rice) LOC_Os01g41900.1 : Myb transcription factor, putative, expressed
MaizeGDB (Corn) Zm00025a038462 , Zm00025a028632
Brachypodium KQK08617
Barley HORVU3Hr1G052710.4 , HORVU3Hr1G052710.2 , HORVU3Hr1G052710.3 , HORVU3Hr1G052710.1
Wheat TraesCS3A02G216200 , TraesCS3D02G217800 , TraesCS3D02G217800 , TraesCS3B02G246000
Populus -


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cDNA sequences
Sobic.003G211200


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G009500 - -
2 Sobic.009G077800 expressed protein -
3 Sobic.003G344600 BAG domain containing protein, expressed -
4 Sobic.009G229000 expressed protein -
5 Sobic.001G247600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@NAD dependent epimerase/dehydratase family protein, putative, expressed K10046: GDP-D-mannose 3', 5'-epimerase
6 Sobic.002G255200 BHLH transcription factor, putative, expressed -
7 Sobic.003G393700 zinc finger, RING-type, putative, expressed -
8 Sobic.002G335300 uncharacterized Cys-rich domain containing protein, putative, expressed -
9 Sobic.007G087200 MBTB21 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed K10523: speckle-type POZ protein
10 Sobic.009G230100 expressed protein -
11 Sobic.010G003700 scarecrow, putative, expressed -
12 Sobic.004G212900 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@B4-BTB1 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with B4 subfamily conserved sequence, expressed -
13 Sobic.009G161500 - -
14 Sobic.009G074100 prenylated rab acceptor, putative, expressed -
15 Sobic.003G426400 glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
16 Sobic.010G274900 serine/threonine-protein kinase Cx32, chloroplast precursor, putative, expressed -
17 Sobic.003G305700 glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
18 Sobic.001G139100 expressed protein -
19 Sobic.002G018400 plant protein of unknown function domain containing protein, expressed -
20 Sobic.009G159200 guanylyl cyclase, putative, expressed -


Gene co-expression network
sample Sobic003G211200 Sobic003G211200 Sobic001G009500 Sobic001G009500 Sobic003G211200--Sobic001G009500 Sobic009G077800 Sobic009G077800 Sobic003G211200--Sobic009G077800 Sobic003G344600 Sobic003G344600 Sobic003G211200--Sobic003G344600 Sobic009G229000 Sobic009G229000 Sobic003G211200--Sobic009G229000 Sobic001G247600 Sobic001G247600 Sobic003G211200--Sobic001G247600 Sobic002G255200 Sobic002G255200 Sobic003G211200--Sobic002G255200 Sobic003G393700 Sobic003G393700 Sobic003G211200--Sobic003G393700 Sobic002G335300 Sobic002G335300 Sobic003G211200--Sobic002G335300 Sobic007G087200 Sobic007G087200 Sobic003G211200--Sobic007G087200 Sobic001G009500--Sobic001G247600 Sobic008G106700 Sobic008G106700 Sobic001G009500--Sobic008G106700 Sobic003G343900 Sobic003G343900 Sobic001G009500--Sobic003G343900 Sobic001G389000 Sobic001G389000 Sobic001G009500--Sobic001G389000 Sobic009G074100 Sobic009G074100 Sobic001G009500--Sobic009G074100 Sobic001G119400 Sobic001G119400 Sobic001G009500--Sobic001G119400 Sobic004G100700 Sobic004G100700 Sobic001G009500--Sobic004G100700 Sobic004G075000 Sobic004G075000 Sobic001G009500--Sobic004G075000 Sobic008G186100 Sobic008G186100 Sobic001G009500--Sobic008G186100 Sobic003G297600 Sobic003G297600 Sobic009G077800--Sobic003G297600 Sobic009G139400 Sobic009G139400 Sobic009G077800--Sobic009G139400 Sobic009G077800--Sobic003G393700 Sobic001G070800 Sobic001G070800 Sobic009G077800--Sobic001G070800 Sobic002G055700 Sobic002G055700 Sobic009G077800--Sobic002G055700 Sobic002G017800 Sobic002G017800 Sobic009G077800--Sobic002G017800 Sobic005G029200 Sobic005G029200 Sobic009G077800--Sobic005G029200 Sobic001G325400 Sobic001G325400 Sobic009G077800--Sobic001G325400 Sobic009G077800--Sobic007G087200 Sobic003G249800 Sobic003G249800 Sobic003G344600--Sobic003G249800 Sobic003G344600--Sobic001G009500 Sobic003G429000 Sobic003G429000 Sobic003G344600--Sobic003G429000 Sobic009G180000 Sobic009G180000 Sobic003G344600--Sobic009G180000 Sobic001G054900 Sobic001G054900 Sobic003G344600--Sobic001G054900 Sobic002G282400 Sobic002G282400 Sobic003G344600--Sobic002G282400 Sobic003G344600--Sobic002G335300 Sobic002G330000 Sobic002G330000 Sobic003G344600--Sobic002G330000 Sobic010G237000 Sobic010G237000 Sobic003G344600--Sobic010G237000 Sobic004G166700 Sobic004G166700 Sobic009G229000--Sobic004G166700 Sobic006G092500 Sobic006G092500 Sobic009G229000--Sobic006G092500 Sobic001G139100 Sobic001G139100 Sobic009G229000--Sobic001G139100 Sobic009G035200 Sobic009G035200 Sobic009G229000--Sobic009G035200 Sobic005G051200 Sobic005G051200 Sobic009G229000--Sobic005G051200 Sobic003G345100 Sobic003G345100 Sobic009G229000--Sobic003G345100 Sobic001G169500 Sobic001G169500 Sobic009G229000--Sobic001G169500 Sobic010G259600 Sobic010G259600 Sobic009G229000--Sobic010G259600 Sobic005G063100 Sobic005G063100 Sobic009G229000--Sobic005G063100 Sobic007G184600 Sobic007G184600 Sobic001G247600--Sobic007G184600 Sobic002G200600 Sobic002G200600 Sobic001G247600--Sobic002G200600 Sobic004G225900 Sobic004G225900 Sobic001G247600--Sobic004G225900 Sobic001G247600--Sobic009G077800 Sobic003G417800 Sobic003G417800 Sobic001G247600--Sobic003G417800 Sobic001G247600--Sobic001G119400 Sobic001G247600--Sobic009G139400 Sobic004G205100 Sobic004G205100 Sobic001G247600--Sobic004G205100 Sobic001G177800 Sobic001G177800 Sobic001G247600--Sobic001G177800 Sobic002G255200--Sobic004G075000 Sobic007G051000 Sobic007G051000 Sobic002G255200--Sobic007G051000 Sobic002G255200--Sobic003G393700 Sobic002G255200--Sobic009G077800 Sobic002G255200--Sobic001G119400 Sobic002G255200--Sobic003G211200 Sobic002G187500 Sobic002G187500 Sobic002G255200--Sobic002G187500 Sobic003G072300 Sobic003G072300 Sobic002G255200--Sobic003G072300 Sobic009G176000 Sobic009G176000 Sobic002G255200--Sobic009G176000 Sobic003G393700--Sobic009G077800 Sobic003G393700--Sobic001G070800 Sobic009G234100 Sobic009G234100 Sobic003G393700--Sobic009G234100 Sobic003G393700--Sobic009G139400 Sobic004G321300 Sobic004G321300 Sobic003G393700--Sobic004G321300 Sobic003G393700--Sobic003G297600 Sobic002G393000 Sobic002G393000 Sobic003G393700--Sobic002G393000 Sobic004G061200 Sobic004G061200 Sobic003G393700--Sobic004G061200 Sobic003G393700--Sobic001G177800 Sobic004G212900 Sobic004G212900 Sobic002G335300--Sobic004G212900 Sobic002G335300--Sobic003G344600 Sobic003G357300 Sobic003G357300 Sobic002G335300--Sobic003G357300 Sobic002G335300--Sobic001G009500 Sobic002G335300--Sobic009G074100 Sobic008G103700 Sobic008G103700 Sobic002G335300--Sobic008G103700 Sobic006G046900 Sobic006G046900 Sobic002G335300--Sobic006G046900 Sobic009G243400 Sobic009G243400 Sobic002G335300--Sobic009G243400 Sobic002G335300--Sobic003G211200 Sobic002G125700 Sobic002G125700 Sobic007G087200--Sobic002G125700 Sobic007G087200--Sobic010G259600 Sobic007G087200--Sobic009G077800 Sobic007G087200--Sobic001G325400 Sobic007G087200--Sobic009G139400 Sobic003G255200 Sobic003G255200 Sobic007G087200--Sobic003G255200 Sobic004G046200 Sobic004G046200 Sobic007G087200--Sobic004G046200 Sobic004G101300 Sobic004G101300 Sobic007G087200--Sobic004G101300 Sobic004G107700 Sobic004G107700 Sobic007G087200--Sobic004G107700
Octagon: transcription factors


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