Gene annotation
Transcriptome id Sobic.002G018400.1
Synonym Sb02g001740
Functional annotation plant protein of unknown function domain containing protein, expressed
UniProt C5X833
Pfam PF03140
Panther DB PTHR31549 PTHR31549:SF5
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G50140 : Plant protein of unknown function (DUF247)
RAP-DB (Rice) LOC_Os08g30520.1 : plant protein of unknown function domain containing protein, expressed
MaizeGDB (Corn) -
Brachypodium KQJ81674 , PNT60612
Barley HORVU1Hr1G006940.23 , HORVU1Hr1G006940.22 , HORVU1Hr1G006940.21 , HORVU1Hr1G006940.20 , HORVU1Hr1G006940.26 , HORVU1Hr1G006940.25 , HORVU1Hr1G006940.24 , HORVU1Hr1G006940.18 , HORVU1Hr1G006940.19 , HORVU1Hr1G006940.12 , HORVU1Hr1G006940.13 , HORVU1Hr1G006940.10 , HORVU1Hr1G006940.11 , HORVU1Hr1G006940.16 , HORVU1Hr1G006940.17 , HORVU1Hr1G006940.14 , HORVU1Hr1G006940.15 , HORVU1Hr1G006940.2 , HORVU1Hr1G006940.3 , HORVU1Hr1G006940.5 , HORVU1Hr1G006940.6 , HORVU1Hr1G006940.7 , HORVU1Hr1G006940.8 , HORVU1Hr1G006940.9
Wheat TraesCSU02G006300 , TraesCS3B02G010200 , TraesCS3B02G007500
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G211200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Myb transcription factor, putative, expressed -
2 Sobic.009G230100 expressed protein -
3 Sobic.002G125700 similar to Aquaporin PIP2-6(PubMedID : 29862293)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@aquaporin protein, putative, expressed K09872: aquaporin PIP
4 Sobic.008G144600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@cytochrome P450, putative, expressed -
5 Sobic.001G325400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@UDP-glucoronosyl/UDP-glucosyl transferase, putative, expressed -
6 Sobic.004G045400 60S ribosomal protein L37a, putative, expressed K02921: RP-L37Ae, large subunit ribosomal protein L37Ae
7 Sobic.009G159200 guanylyl cyclase, putative, expressed -
8 Sobic.007G087200 MBTB21 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed K10523: speckle-type POZ protein
9 Sobic.006G059700 hydrolase, NUDIX family, domain containing protein, expressed K07766: diphosphoinositol-polyphosphate diphosphatase
10 Sobic.002G302500 -(PubMedID : 29147737)@serine/threonine-protein kinase receptor precursor, putative, expressed -
11 Sobic.004G225900 GEM, putative, expressed -
12 Sobic.009G077800 expressed protein -
13 Sobic.001G189300 AMP-binding domain containing protein, expressed -
14 Sobic.002G327300 expressed protein -
15 Sobic.001G086900 potassium channel protein, putative, expressed K05389: potassium channel subfamily K, other eukaryote
16 Sobic.002G040900 VQ domain containing protein, putative, expressed -
17 Sobic.004G262200 DNA binding protein, putative, expressed -
18 Sobic.009G155050 - K14431: transcription factor TGA
19 Sobic.006G039100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@RALFL36 - Rapid ALkalinization Factor RALF family protein precursor, expressed -
20 Sobic.009G229000 expressed protein -


Gene co-expression network
sample Sobic002G018400 Sobic002G018400 Sobic003G211200 Sobic003G211200 Sobic002G018400--Sobic003G211200 Sobic009G230100 Sobic009G230100 Sobic002G018400--Sobic009G230100 Sobic002G125700 Sobic002G125700 Sobic002G018400--Sobic002G125700 Sobic008G144600 Sobic008G144600 Sobic002G018400--Sobic008G144600 Sobic001G325400 Sobic001G325400 Sobic002G018400--Sobic001G325400 Sobic004G045400 Sobic004G045400 Sobic002G018400--Sobic004G045400 Sobic009G159200 Sobic009G159200 Sobic002G018400--Sobic009G159200 Sobic007G087200 Sobic007G087200 Sobic002G018400--Sobic007G087200 Sobic006G059700 Sobic006G059700 Sobic002G018400--Sobic006G059700 Sobic001G009500 Sobic001G009500 Sobic003G211200--Sobic001G009500 Sobic009G077800 Sobic009G077800 Sobic003G211200--Sobic009G077800 Sobic003G344600 Sobic003G344600 Sobic003G211200--Sobic003G344600 Sobic009G229000 Sobic009G229000 Sobic003G211200--Sobic009G229000 Sobic001G247600 Sobic001G247600 Sobic003G211200--Sobic001G247600 Sobic002G255200 Sobic002G255200 Sobic003G211200--Sobic002G255200 Sobic003G393700 Sobic003G393700 Sobic003G211200--Sobic003G393700 Sobic002G335300 Sobic002G335300 Sobic003G211200--Sobic002G335300 Sobic003G211200--Sobic007G087200 Sobic004G144500 Sobic004G144500 Sobic009G230100--Sobic004G144500 Sobic009G230100--Sobic009G077800 Sobic009G230100--Sobic007G087200 Sobic004G166700 Sobic004G166700 Sobic009G230100--Sobic004G166700 Sobic009G230100--Sobic003G393700 Sobic002G345300 Sobic002G345300 Sobic009G230100--Sobic002G345300 Sobic010G268400 Sobic010G268400 Sobic009G230100--Sobic010G268400 Sobic004G101300 Sobic004G101300 Sobic009G230100--Sobic004G101300 Sobic003G417350 Sobic003G417350 Sobic009G230100--Sobic003G417350 Sobic003G255200 Sobic003G255200 Sobic002G125700--Sobic003G255200 Sobic001G503100 Sobic001G503100 Sobic002G125700--Sobic001G503100 Sobic003G352300 Sobic003G352300 Sobic002G125700--Sobic003G352300 Sobic010G259600 Sobic010G259600 Sobic002G125700--Sobic010G259600 Sobic002G125700--Sobic001G325400 Sobic002G125700--Sobic007G087200 Sobic004G107700 Sobic004G107700 Sobic002G125700--Sobic004G107700 Sobic009G231000 Sobic009G231000 Sobic002G125700--Sobic009G231000 Sobic010G063000 Sobic010G063000 Sobic002G125700--Sobic010G063000 Sobic001G487400 Sobic001G487400 Sobic008G144600--Sobic001G487400 Sobic006G150700 Sobic006G150700 Sobic008G144600--Sobic006G150700 Sobic002G213600 Sobic002G213600 Sobic008G144600--Sobic002G213600 Sobic003G016100 Sobic003G016100 Sobic008G144600--Sobic003G016100 Sobic003G363900 Sobic003G363900 Sobic008G144600--Sobic003G363900 Sobic001G039200 Sobic001G039200 Sobic008G144600--Sobic001G039200 Sobic001G340400 Sobic001G340400 Sobic008G144600--Sobic001G340400 Sobic003G079400 Sobic003G079400 Sobic008G144600--Sobic003G079400 Sobic002G093700 Sobic002G093700 Sobic008G144600--Sobic002G093700 Sobic006G039100 Sobic006G039100 Sobic001G325400--Sobic006G039100 Sobic009G111000 Sobic009G111000 Sobic001G325400--Sobic009G111000 Sobic001G325400--Sobic002G125700 Sobic001G462700 Sobic001G462700 Sobic001G325400--Sobic001G462700 Sobic001G325400--Sobic009G077800 Sobic002G017800 Sobic002G017800 Sobic001G325400--Sobic002G017800 Sobic001G325400--Sobic009G231000 Sobic001G325400--Sobic007G087200 Sobic003G117600 Sobic003G117600 Sobic001G325400--Sobic003G117600 Sobic010G205400 Sobic010G205400 Sobic004G045400--Sobic010G205400 Sobic006G158400 Sobic006G158400 Sobic004G045400--Sobic006G158400 Sobic002G042000 Sobic002G042000 Sobic004G045400--Sobic002G042000 Sobic001G054500 Sobic001G054500 Sobic004G045400--Sobic001G054500 Sobic003G364300 Sobic003G364300 Sobic004G045400--Sobic003G364300 Sobic007G008100 Sobic007G008100 Sobic004G045400--Sobic007G008100 Sobic001G361600 Sobic001G361600 Sobic004G045400--Sobic001G361600 Sobic002G040900 Sobic002G040900 Sobic004G045400--Sobic002G040900 Sobic006G159100 Sobic006G159100 Sobic004G045400--Sobic006G159100 Sobic007G197600 Sobic007G197600 Sobic009G159200--Sobic007G197600 Sobic007G177100 Sobic007G177100 Sobic009G159200--Sobic007G177100 Sobic002G353800 Sobic002G353800 Sobic009G159200--Sobic002G353800 Sobic001G070800 Sobic001G070800 Sobic009G159200--Sobic001G070800 Sobic006G157500 Sobic006G157500 Sobic009G159200--Sobic006G157500 Sobic009G075900 Sobic009G075900 Sobic009G159200--Sobic009G075900 Sobic003G379800 Sobic003G379800 Sobic009G159200--Sobic003G379800 Sobic009G159200--Sobic003G393700 Sobic004G203700 Sobic004G203700 Sobic009G159200--Sobic004G203700 Sobic007G087200--Sobic002G125700 Sobic007G087200--Sobic010G259600 Sobic007G087200--Sobic009G077800 Sobic007G087200--Sobic001G325400 Sobic009G139400 Sobic009G139400 Sobic007G087200--Sobic009G139400 Sobic007G087200--Sobic003G255200 Sobic004G046200 Sobic004G046200 Sobic007G087200--Sobic004G046200 Sobic007G087200--Sobic004G101300 Sobic007G087200--Sobic004G107700 Sobic003G404600 Sobic003G404600 Sobic006G059700--Sobic003G404600 Sobic004G262200 Sobic004G262200 Sobic006G059700--Sobic004G262200 Sobic003G280400 Sobic003G280400 Sobic006G059700--Sobic003G280400 Sobic010G272300 Sobic010G272300 Sobic006G059700--Sobic010G272300 Sobic010G001000 Sobic010G001000 Sobic006G059700--Sobic010G001000 Sobic003G366600 Sobic003G366600 Sobic006G059700--Sobic003G366600 Sobic001G147900 Sobic001G147900 Sobic006G059700--Sobic001G147900 Sobic006G125100 Sobic006G125100 Sobic006G059700--Sobic006G125100 Sobic002G312900 Sobic002G312900 Sobic006G059700--Sobic002G312900
Octagon: transcription factors


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