Gene annotation
Transcriptome id Sobic.001G189300.1
Synonym Sb01g016630
Functional annotation AMP-binding domain containing protein, expressed
UniProt A0A1B6QJR8
Pfam PF13193 PF00501
Panther DB PTHR24096 PTHR24096:SF160
NCBI CDD KOG1176; Acyl-CoA synthetase
KEGG Orthology -
Gene Ontology GO:0008152; metabolic process GO:0003824catalytic activity


Orthologs (automatic annotation)
TAIR AT5G63380 : AMP-dependent synthetase and ligase family protein
RAP-DB (Rice) LOC_Os07g17970.1 : AMP-binding domain containing protein, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G327300 expressed protein -
2 Sobic.004G046200 sulfotransferase domain containing protein, expressed -
3 Sobic.010G008400 bark storage protein A precursor, putative, expressed -
4 Sobic.003G016100 expressed protein -
5 Sobic.006G141700 OsGrx_C2.2 - glutaredoxin subgroup I, expressed K03676: grxC, GLRX, glutaredoxin 3
6 Sobic.002G176100 membrane protein, putative, expressed -
7 Sobic.003G264600 glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
8 Sobic.009G187200 UDP-glucoronosyl and UDP-glucosyl transferase domain containing protein, expressed -
9 Sobic.003G084400 ZOS1-03 - C2H2 zinc finger protein, expressed -
10 Sobic.010G067400 receptor-like protein kinase precursor, putative, expressed -
11 Sobic.002G213600 "domain confirmed by Pfam database, expression not supported"(PubMedID : 20499123)@OsSAUR38 - Auxin-responsive SAUR gene family member, expressed K14488: SAUR family protein
12 Sobic.002G003800 plastocyanin-like domain containing protein, putative, expressed -
13 Sobic.009G109000 expressed protein -
14 Sobic.001G361600 chaperonin, putative, expressed K04078: groES, chaperonin GroES
15 Sobic.001G128500 LTPL73 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
16 Sobic.002G327100 expressed protein -
17 Sobic.002G347500 expressed protein -
18 Sobic.003G053400 hydrolase, alpha/beta fold family protein, putative, expressed -
19 Sobic.003G319500 receptor protein kinase, putative, expressed -
20 Sobic.008G106700 isoflavone reductase, putative, expressed -


Gene co-expression network
sample Sobic001G189300 Sobic001G189300 Sobic002G327300 Sobic002G327300 Sobic001G189300--Sobic002G327300 Sobic004G046200 Sobic004G046200 Sobic001G189300--Sobic004G046200 Sobic010G008400 Sobic010G008400 Sobic001G189300--Sobic010G008400 Sobic003G016100 Sobic003G016100 Sobic001G189300--Sobic003G016100 Sobic006G141700 Sobic006G141700 Sobic001G189300--Sobic006G141700 Sobic002G176100 Sobic002G176100 Sobic001G189300--Sobic002G176100 Sobic003G264600 Sobic003G264600 Sobic001G189300--Sobic003G264600 Sobic009G187200 Sobic009G187200 Sobic001G189300--Sobic009G187200 Sobic003G084400 Sobic003G084400 Sobic001G189300--Sobic003G084400 Sobic002G327300--Sobic010G008400 Sobic002G327300--Sobic003G264600 Sobic002G327300--Sobic004G046200 Sobic002G327300--Sobic003G084400 Sobic003G228200 Sobic003G228200 Sobic002G327300--Sobic003G228200 Sobic003G319500 Sobic003G319500 Sobic002G327300--Sobic003G319500 Sobic002G327100 Sobic002G327100 Sobic002G327300--Sobic002G327100 Sobic001G500000 Sobic001G500000 Sobic002G327300--Sobic001G500000 Sobic002G017800 Sobic002G017800 Sobic002G327300--Sobic002G017800 Sobic008G106700 Sobic008G106700 Sobic004G046200--Sobic008G106700 Sobic006G044100 Sobic006G044100 Sobic004G046200--Sobic006G044100 Sobic004G046200--Sobic009G187200 Sobic006G199800 Sobic006G199800 Sobic004G046200--Sobic006G199800 Sobic004G046200--Sobic003G084400 Sobic003G255200 Sobic003G255200 Sobic004G046200--Sobic003G255200 Sobic004G046200--Sobic001G500000 Sobic003G079400 Sobic003G079400 Sobic004G046200--Sobic003G079400 Sobic009G111000 Sobic009G111000 Sobic004G046200--Sobic009G111000 Sobic010G008400--Sobic002G176100 Sobic002G003800 Sobic002G003800 Sobic010G008400--Sobic002G003800 Sobic010G008400--Sobic003G319500 Sobic010G008400--Sobic002G327300 Sobic010G008400--Sobic004G046200 Sobic010G008400--Sobic001G500000 Sobic010G085800 Sobic010G085800 Sobic010G008400--Sobic010G085800 Sobic010G008400--Sobic002G017800 Sobic010G008400--Sobic009G111000 Sobic002G213600 Sobic002G213600 Sobic003G016100--Sobic002G213600 Sobic003G016100--Sobic004G046200 Sobic010G067400 Sobic010G067400 Sobic003G016100--Sobic010G067400 Sobic003G016100--Sobic009G187200 Sobic004G042000 Sobic004G042000 Sobic003G016100--Sobic004G042000 Sobic003G016100--Sobic003G079400 Sobic003G016100--Sobic003G084400 Sobic003G316000 Sobic003G316000 Sobic003G016100--Sobic003G316000 Sobic004G318700 Sobic004G318700 Sobic003G016100--Sobic004G318700 Sobic001G295200 Sobic001G295200 Sobic006G141700--Sobic001G295200 Sobic009G188000 Sobic009G188000 Sobic006G141700--Sobic009G188000 Sobic004G141100 Sobic004G141100 Sobic006G141700--Sobic004G141100 Sobic002G375100 Sobic002G375100 Sobic006G141700--Sobic002G375100 Sobic006G116700 Sobic006G116700 Sobic006G141700--Sobic006G116700 Sobic001G018900 Sobic001G018900 Sobic006G141700--Sobic001G018900 Sobic003G426400 Sobic003G426400 Sobic006G141700--Sobic003G426400 Sobic001G313600 Sobic001G313600 Sobic006G141700--Sobic001G313600 Sobic003G007600 Sobic003G007600 Sobic006G141700--Sobic003G007600 Sobic002G176100--Sobic003G319500 Sobic002G176100--Sobic009G111000 Sobic002G176100--Sobic004G141100 Sobic002G176100--Sobic010G008400 Sobic003G417200 Sobic003G417200 Sobic002G176100--Sobic003G417200 Sobic010G184800 Sobic010G184800 Sobic002G176100--Sobic010G184800 Sobic008G009400 Sobic008G009400 Sobic002G176100--Sobic008G009400 Sobic001G304100 Sobic001G304100 Sobic002G176100--Sobic001G304100 Sobic002G176100--Sobic009G188000 Sobic003G408100 Sobic003G408100 Sobic003G264600--Sobic003G408100 Sobic010G063801 Sobic010G063801 Sobic003G264600--Sobic010G063801 Sobic001G318500 Sobic001G318500 Sobic003G264600--Sobic001G318500 Sobic001G054900 Sobic001G054900 Sobic003G264600--Sobic001G054900 Sobic003G264600--Sobic002G327300 Sobic004G340900 Sobic004G340900 Sobic003G264600--Sobic004G340900 Sobic003G264600--Sobic003G228200 Sobic003G264600--Sobic006G116700 Sobic003G264600--Sobic006G141700 Sobic008G172600 Sobic008G172600 Sobic009G187200--Sobic008G172600 Sobic009G187200--Sobic004G046200 Sobic009G187200--Sobic006G044100 Sobic001G128500 Sobic001G128500 Sobic009G187200--Sobic001G128500 Sobic009G187200--Sobic010G067400 Sobic009G187200--Sobic003G016100 Sobic009G187200--Sobic003G255200 Sobic001G503100 Sobic001G503100 Sobic009G187200--Sobic001G503100 Sobic003G255500 Sobic003G255500 Sobic009G187200--Sobic003G255500 Sobic005G011300 Sobic005G011300 Sobic003G084400--Sobic005G011300 Sobic003G084400--Sobic001G500000 Sobic002G188900 Sobic002G188900 Sobic003G084400--Sobic002G188900 Sobic003G084400--Sobic004G046200 Sobic003G084400--Sobic001G304100 Sobic001G367600 Sobic001G367600 Sobic003G084400--Sobic001G367600 Sobic005G107900 Sobic005G107900 Sobic003G084400--Sobic005G107900 Sobic004G100700 Sobic004G100700 Sobic003G084400--Sobic004G100700 Sobic003G084400--Sobic001G313600
Octagon: transcription factors


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