Gene annotation
Transcriptome id Sobic.002G255200.2
Synonym Sb02g029040
Functional annotation BHLH transcription factor, putative, expressed
UniProt A0A1W0W5Y5
Pfam PF00010
Panther DB PTHR12565 PTHR12565:SF105
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G68920 : basic helix-loop-helix (bHLH) DNA-binding superfamily protein
RAP-DB (Rice) LOC_Os09g32510.4 : BHLH transcription factor, putative, expressed
MaizeGDB (Corn) Zm00025a047544 , Zm00025a014274
Brachypodium PNT73957 , KQK12636 , KQJ90886
Barley HORVU3Hr1G093310.5 , HORVU3Hr1G093310.4 , HORVU3Hr1G093310.1 , HORVU3Hr1G093310.3 , HORVU3Hr1G093310.2
Wheat -
Populus -


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cDNA sequences
Sobic.002G255200


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G075000 expressed protein -
2 Sobic.007G051000 mitochondrial NADH-ubiquinone oxidoreductase, putative, expressed K03939: NADH dehydrogenase (ubiquinone) Fe-S protein 6
3 Sobic.003G393700 zinc finger, RING-type, putative, expressed -
4 Sobic.009G077800 expressed protein -
5 Sobic.001G119400 microsomal glutathione S-transferase 3, putative, expressed K00799: GST, glutathione S-transferase
6 Sobic.003G211200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Myb transcription factor, putative, expressed -
7 Sobic.002G187500 hypoxia-responsive family protein, putative, expressed -
8 Sobic.003G072300 triosephosphate isomerase(PubMedID : 27016024)@triosephosphate isomerase, cytosolic, putative, expressed K01803: TPI, triosephosphate isomerase (TIM)
9 Sobic.009G176000 expressed protein K03945: NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 1
10 Sobic.002G393000 pyrrolidone-carboxylate peptidase, putative, expressed K01304: pyroglutamyl-peptidase
11 Sobic.001G084900 expressed protein -
12 Sobic.007G184600 60S ribosomal protein L38, putative, expressed K02923: RP-L38e, large subunit ribosomal protein L38e
13 Sobic.008G033600 Pyruvate kinase family protein(PubMedID : 26465154)@pyruvate kinase, putative, expressed K00873: PK, pyruvate kinase
14 Sobic.004G051700 OTU-like cysteine protease family protein, putative, expressed K13719: OTU1, ubiquitin thioesterase OTU1
15 Sobic.009G038100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
16 Sobic.001G402050 - K02979: RP-S28e, small subunit ribosomal protein S28e
17 Sobic.003G144900 expressed protein -
18 Sobic.002G414600 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@hypoxia-responsive family protein, putative, expressed -
19 Sobic.009G230100 expressed protein -
20 Sobic.010G213700 GDU1, putative, expressed -


Gene co-expression network
sample Sobic002G255200 Sobic002G255200 Sobic004G075000 Sobic004G075000 Sobic002G255200--Sobic004G075000 Sobic007G051000 Sobic007G051000 Sobic002G255200--Sobic007G051000 Sobic003G393700 Sobic003G393700 Sobic002G255200--Sobic003G393700 Sobic009G077800 Sobic009G077800 Sobic002G255200--Sobic009G077800 Sobic001G119400 Sobic001G119400 Sobic002G255200--Sobic001G119400 Sobic003G211200 Sobic003G211200 Sobic002G255200--Sobic003G211200 Sobic002G187500 Sobic002G187500 Sobic002G255200--Sobic002G187500 Sobic003G072300 Sobic003G072300 Sobic002G255200--Sobic003G072300 Sobic009G176000 Sobic009G176000 Sobic002G255200--Sobic009G176000 Sobic007G155000 Sobic007G155000 Sobic004G075000--Sobic007G155000 Sobic002G393000 Sobic002G393000 Sobic004G075000--Sobic002G393000 Sobic001G038900 Sobic001G038900 Sobic004G075000--Sobic001G038900 Sobic003G364600 Sobic003G364600 Sobic004G075000--Sobic003G364600 Sobic004G061200 Sobic004G061200 Sobic004G075000--Sobic004G061200 Sobic009G159400 Sobic009G159400 Sobic004G075000--Sobic009G159400 Sobic001G477600 Sobic001G477600 Sobic004G075000--Sobic001G477600 Sobic006G143400 Sobic006G143400 Sobic004G075000--Sobic006G143400 Sobic004G075000--Sobic003G393700 Sobic010G012500 Sobic010G012500 Sobic007G051000--Sobic010G012500 Sobic007G051000--Sobic009G176000 Sobic002G398901 Sobic002G398901 Sobic007G051000--Sobic002G398901 Sobic004G211833 Sobic004G211833 Sobic007G051000--Sobic004G211833 Sobic002G190900 Sobic002G190900 Sobic007G051000--Sobic002G190900 Sobic006G083500 Sobic006G083500 Sobic007G051000--Sobic006G083500 Sobic001G018500 Sobic001G018500 Sobic007G051000--Sobic001G018500 Sobic003G209000 Sobic003G209000 Sobic007G051000--Sobic003G209000 Sobic010G204500 Sobic010G204500 Sobic007G051000--Sobic010G204500 Sobic003G393700--Sobic009G077800 Sobic001G070800 Sobic001G070800 Sobic003G393700--Sobic001G070800 Sobic009G234100 Sobic009G234100 Sobic003G393700--Sobic009G234100 Sobic009G139400 Sobic009G139400 Sobic003G393700--Sobic009G139400 Sobic004G321300 Sobic004G321300 Sobic003G393700--Sobic004G321300 Sobic003G297600 Sobic003G297600 Sobic003G393700--Sobic003G297600 Sobic003G393700--Sobic002G393000 Sobic003G393700--Sobic004G061200 Sobic001G177800 Sobic001G177800 Sobic003G393700--Sobic001G177800 Sobic009G077800--Sobic003G297600 Sobic009G077800--Sobic009G139400 Sobic009G077800--Sobic003G393700 Sobic009G077800--Sobic001G070800 Sobic002G055700 Sobic002G055700 Sobic009G077800--Sobic002G055700 Sobic002G017800 Sobic002G017800 Sobic009G077800--Sobic002G017800 Sobic005G029200 Sobic005G029200 Sobic009G077800--Sobic005G029200 Sobic001G325400 Sobic001G325400 Sobic009G077800--Sobic001G325400 Sobic007G087200 Sobic007G087200 Sobic009G077800--Sobic007G087200 Sobic009G183400 Sobic009G183400 Sobic001G119400--Sobic009G183400 Sobic001G423800 Sobic001G423800 Sobic001G119400--Sobic001G423800 Sobic001G119400--Sobic002G393000 Sobic009G008900 Sobic009G008900 Sobic001G119400--Sobic009G008900 Sobic001G119400--Sobic009G139400 Sobic001G119400--Sobic001G038900 Sobic006G275200 Sobic006G275200 Sobic001G119400--Sobic006G275200 Sobic006G099900 Sobic006G099900 Sobic001G119400--Sobic006G099900 Sobic003G417800 Sobic003G417800 Sobic001G119400--Sobic003G417800 Sobic001G009500 Sobic001G009500 Sobic003G211200--Sobic001G009500 Sobic003G211200--Sobic009G077800 Sobic003G344600 Sobic003G344600 Sobic003G211200--Sobic003G344600 Sobic009G229000 Sobic009G229000 Sobic003G211200--Sobic009G229000 Sobic001G247600 Sobic001G247600 Sobic003G211200--Sobic001G247600 Sobic003G211200--Sobic002G255200 Sobic003G211200--Sobic003G393700 Sobic002G335300 Sobic002G335300 Sobic003G211200--Sobic002G335300 Sobic003G211200--Sobic007G087200 Sobic010G009300 Sobic010G009300 Sobic002G187500--Sobic010G009300 Sobic003G285800 Sobic003G285800 Sobic002G187500--Sobic003G285800 Sobic002G187500--Sobic002G190900 Sobic002G046100 Sobic002G046100 Sobic002G187500--Sobic002G046100 Sobic002G187500--Sobic003G072300 Sobic002G187500--Sobic001G177800 Sobic002G081600 Sobic002G081600 Sobic002G187500--Sobic002G081600 Sobic001G281400 Sobic001G281400 Sobic002G187500--Sobic001G281400 Sobic002G187500--Sobic003G393700 Sobic003G072300--Sobic002G081600 Sobic004G205100 Sobic004G205100 Sobic003G072300--Sobic004G205100 Sobic003G072300--Sobic002G187500 Sobic003G072300--Sobic003G209000 Sobic003G072300--Sobic002G190900 Sobic006G213000 Sobic006G213000 Sobic003G072300--Sobic006G213000 Sobic003G072300--Sobic010G204500 Sobic003G155400 Sobic003G155400 Sobic003G072300--Sobic003G155400 Sobic002G379500 Sobic002G379500 Sobic003G072300--Sobic002G379500 Sobic009G176000--Sobic002G398901 Sobic009G176000--Sobic007G051000 Sobic009G176000--Sobic006G083500 Sobic009G176000--Sobic010G012500 Sobic009G176000--Sobic004G211833 Sobic009G176000--Sobic002G190900 Sobic004G060500 Sobic004G060500 Sobic009G176000--Sobic004G060500 Sobic002G418400 Sobic002G418400 Sobic009G176000--Sobic002G418400 Sobic003G215700 Sobic003G215700 Sobic009G176000--Sobic003G215700
Octagon: transcription factors


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