Gene annotation
Transcriptome id Sobic.008G033600.2,Sobic.008G033600.1
Synonym Sb08g002890
Functional annotation Pyruvate kinase family protein (PubMedID : 26465154)
pyruvate kinase, putative, expressed
UniProt A0A1B6PB54 , A0A1B6PBV5
Pfam PF02887 PF00224
Panther DB PTHR11817 PTHR11817:SF33
NCBI CDD -
KEGG Orthology K00873; PK, pyruvate kinase
Gene Ontology GO:0006096; glycolytic process GO:0004743pyruvate kinase activity GO:0000287magnesium ion binding


Orthologs (automatic annotation)
TAIR AT3G52990 : Pyruvate kinase family protein
RAP-DB (Rice) LOC_Os11g05110.1,LOC_Os11g05110.2 : pyruvate kinase, putative, expressed
MaizeGDB (Corn) Zm00025a033458 , Zm00025a053856
Brachypodium KQJ92312
Barley HORVU5Hr1G041120.7 , HORVU5Hr1G041120.6 , HORVU5Hr1G041120.5 , HORVU5Hr1G041120.4 , HORVU5Hr1G041120.3 , HORVU5Hr1G041120.2 , HORVU5Hr1G041120.1
Wheat TraesCS5A02G131100 , TraesCS5B02G131000 , TraesCS5D02G138800
Populus -


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cDNA sequences
Sobic.008G033600


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G055200 phosphoglycerate kinase protein, putative, expressed K00927: PGK, phosphoglycerate kinase
2 Sobic.006G173900 glutathione peroxidase, putative, expressed K00432: gpx, btuE, glutathione peroxidase
3 Sobic.004G187900 riboflavin biosynthesis protein ribAB, chloroplast precursor, putative, expressed K14652: 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II
4 Sobic.001G281400 expressed protein -
5 Sobic.002G267500 hydrolase, alpha/beta fold family domain containing protein, expressed -
6 Sobic.003G377900 chitin-inducible gibberellin-responsive protein, putative, expressed -
7 Sobic.009G008900 cytochrome b5-like Heme/Steroid binding domain containing protein, expressed -
8 Sobic.001G459200 MYB family transcription factor, putative, expressed -
9 Sobic.010G149300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@ubiquitin-conjugating enzyme, putative, expressed K06689: UBE2D, UBC4, ubiquitin-conjugating enzyme E2 D
10 Sobic.010G099900 expressed protein -
11 Sobic.003G350300 ubiquitin-conjugating enzyme, putative, expressed K10575: UBE2G1, ubiquitin-conjugating enzyme E2 G1
12 Sobic.005G034400 pyruvate kinase, putative, expressed K00873: PK, pyruvate kinase
13 Sobic.002G414600 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@hypoxia-responsive family protein, putative, expressed -
14 Sobic.004G177700 AIG1, putative, expressed -
15 Sobic.010G185500 ethanol tolerance protein GEKO1, putative, expressed K09716: dtdA, D-aminoacyl-tRNA deacylase
16 Sobic.003G181500 ZOS1-09 - C2H2 zinc finger protein, expressed -
17 Sobic.003G285800 ubiquitin domain-containing protein 1, putative, expressed -
18 Sobic.009G141800 cytochrome c, putative, expressed K08738: cytochrome c
19 Sobic.002G312400 domain of unknown function domain containing protein, expressed -
20 Sobic.001G477300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@GRAM domain containing protein, expressed -


Gene co-expression network
sample Sobic008G033600 Sobic008G033600 Sobic004G055200 Sobic004G055200 Sobic008G033600--Sobic004G055200 Sobic006G173900 Sobic006G173900 Sobic008G033600--Sobic006G173900 Sobic004G187900 Sobic004G187900 Sobic008G033600--Sobic004G187900 Sobic001G281400 Sobic001G281400 Sobic008G033600--Sobic001G281400 Sobic002G267500 Sobic002G267500 Sobic008G033600--Sobic002G267500 Sobic003G377900 Sobic003G377900 Sobic008G033600--Sobic003G377900 Sobic009G008900 Sobic009G008900 Sobic008G033600--Sobic009G008900 Sobic001G459200 Sobic001G459200 Sobic008G033600--Sobic001G459200 Sobic010G149300 Sobic010G149300 Sobic008G033600--Sobic010G149300 Sobic004G055200--Sobic008G033600 Sobic004G055200--Sobic001G459200 Sobic003G130800 Sobic003G130800 Sobic004G055200--Sobic003G130800 Sobic004G330700 Sobic004G330700 Sobic004G055200--Sobic004G330700 Sobic004G055200--Sobic001G281400 Sobic004G055200--Sobic004G187900 Sobic001G499300 Sobic001G499300 Sobic004G055200--Sobic001G499300 Sobic001G477300 Sobic001G477300 Sobic004G055200--Sobic001G477300 Sobic007G051000 Sobic007G051000 Sobic004G055200--Sobic007G051000 Sobic006G173900--Sobic009G008900 Sobic010G099900 Sobic010G099900 Sobic006G173900--Sobic010G099900 Sobic002G393000 Sobic002G393000 Sobic006G173900--Sobic002G393000 Sobic006G275200 Sobic006G275200 Sobic006G173900--Sobic006G275200 Sobic008G136400 Sobic008G136400 Sobic006G173900--Sobic008G136400 Sobic002G414600 Sobic002G414600 Sobic006G173900--Sobic002G414600 Sobic001G119400 Sobic001G119400 Sobic006G173900--Sobic001G119400 Sobic001G423800 Sobic001G423800 Sobic006G173900--Sobic001G423800 Sobic004G177700 Sobic004G177700 Sobic006G173900--Sobic004G177700 Sobic004G187900--Sobic001G281400 Sobic001G124600 Sobic001G124600 Sobic004G187900--Sobic001G124600 Sobic002G140400 Sobic002G140400 Sobic004G187900--Sobic002G140400 Sobic009G141800 Sobic009G141800 Sobic004G187900--Sobic009G141800 Sobic004G321300 Sobic004G321300 Sobic004G187900--Sobic004G321300 Sobic003G350300 Sobic003G350300 Sobic004G187900--Sobic003G350300 Sobic004G187900--Sobic009G008900 Sobic004G187900--Sobic001G477300 Sobic004G187900--Sobic008G136400 Sobic001G281400--Sobic004G187900 Sobic001G281400--Sobic002G267500 Sobic001G281400--Sobic010G149300 Sobic002G190900 Sobic002G190900 Sobic001G281400--Sobic002G190900 Sobic002G046100 Sobic002G046100 Sobic001G281400--Sobic002G046100 Sobic010G086200 Sobic010G086200 Sobic001G281400--Sobic010G086200 Sobic001G281400--Sobic009G141800 Sobic001G281400--Sobic009G008900 Sobic001G281400--Sobic001G499300 Sobic002G267500--Sobic001G281400 Sobic004G272800 Sobic004G272800 Sobic002G267500--Sobic004G272800 Sobic002G267500--Sobic002G046100 Sobic003G253000 Sobic003G253000 Sobic002G267500--Sobic003G253000 Sobic002G267500--Sobic010G149300 Sobic002G345300 Sobic002G345300 Sobic002G267500--Sobic002G345300 Sobic002G267500--Sobic001G459200 Sobic009G143400 Sobic009G143400 Sobic002G267500--Sobic009G143400 Sobic002G267500--Sobic006G173900 Sobic010G031300 Sobic010G031300 Sobic003G377900--Sobic010G031300 Sobic006G267200 Sobic006G267200 Sobic003G377900--Sobic006G267200 Sobic003G377900--Sobic008G033600 Sobic003G377900--Sobic010G149300 Sobic001G397200 Sobic001G397200 Sobic003G377900--Sobic001G397200 Sobic006G127900 Sobic006G127900 Sobic003G377900--Sobic006G127900 Sobic001G405500 Sobic001G405500 Sobic003G377900--Sobic001G405500 Sobic003G086600 Sobic003G086600 Sobic003G377900--Sobic003G086600 Sobic004G280200 Sobic004G280200 Sobic003G377900--Sobic004G280200 Sobic009G008900--Sobic006G173900 Sobic009G008900--Sobic001G119400 Sobic009G008900--Sobic006G275200 Sobic009G008900--Sobic002G393000 Sobic009G008900--Sobic008G136400 Sobic009G008900--Sobic001G423800 Sobic001G177800 Sobic001G177800 Sobic009G008900--Sobic001G177800 Sobic009G008900--Sobic002G414600 Sobic001G038900 Sobic001G038900 Sobic009G008900--Sobic001G038900 Sobic009G185800 Sobic009G185800 Sobic001G459200--Sobic009G185800 Sobic001G459200--Sobic003G253000 Sobic001G459200--Sobic001G499300 Sobic001G459200--Sobic004G055200 Sobic001G459200--Sobic002G267500 Sobic001G459200--Sobic002G046100 Sobic001G459200--Sobic004G272800 Sobic003G181500 Sobic003G181500 Sobic001G459200--Sobic003G181500 Sobic001G459200--Sobic003G130800 Sobic010G149300--Sobic001G281400 Sobic010G149300--Sobic010G086200 Sobic010G149300--Sobic002G267500 Sobic010G149300--Sobic009G143400 Sobic010G149300--Sobic003G181500 Sobic010G149300--Sobic002G046100 Sobic010G149300--Sobic004G177700 Sobic010G149300--Sobic002G345300 Sobic009G129000 Sobic009G129000 Sobic010G149300--Sobic009G129000
Octagon: transcription factors


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