Gene annotation
Transcriptome id Sobic.005G034400.1
Synonym Sb05g002900
Functional annotation pyruvate kinase, putative, expressed
UniProt C5Y4L1
Pfam PF02887 PF00224
Panther DB PTHR11817 PTHR11817:SF33
NCBI CDD -
KEGG Orthology K00873; PK, pyruvate kinase
Gene Ontology GO:0006096; glycolytic process GO:0004743pyruvate kinase activity GO:0000287magnesium ion binding


Orthologs (automatic annotation)
TAIR AT3G52990 : Pyruvate kinase family protein
RAP-DB (Rice) LOC_Os11g05110.1 : pyruvate kinase, putative, expressed
MaizeGDB (Corn) Zm00025a033458 , Zm00025a053856
Brachypodium KQJ92312
Barley HORVU5Hr1G041120.8 , HORVU5Hr1G041120.7 , HORVU5Hr1G041120.6 , HORVU5Hr1G041120.5 , HORVU5Hr1G041120.4 , HORVU5Hr1G041120.2 , HORVU5Hr1G041120.1 , HORVU5Hr1G041120.3
Wheat TraesCS5A02G131100 , TraesCS5B02G131000 , TraesCS5D02G138800
Populus -


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cDNA sequences
Sobic.005G034400


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G033600 Pyruvate kinase family protein(PubMedID : 26465154)@pyruvate kinase, putative, expressed K00873: PK, pyruvate kinase
2 Sobic.004G055200 phosphoglycerate kinase protein, putative, expressed K00927: PGK, phosphoglycerate kinase
3 Sobic.001G459200 MYB family transcription factor, putative, expressed -
4 Sobic.004G020000 translation initiation factor eIF3 subunit, putative, expressed K03245: translation initiation factor 3 subunit J
5 Sobic.003G253000 ubiquitin-conjugating enzyme, putative, expressed K10580: UBE2N, BLU, ubiquitin-conjugating enzyme E2 N
6 Sobic.002G264400 metallo-beta-lactamase family protein, putative, expressed K01069: gloB, gloC, hydroxyacylglutathione hydrolase
7 Sobic.001G224400 eukaryotic translation initiation factor, putative, expressed K03259: translation initiation factor 4E
8 Sobic.002G267500 hydrolase, alpha/beta fold family domain containing protein, expressed -
9 Sobic.001G288800 nonsense-mediated mRNA decay protein 3, putative, expressed K07562: nonsense-mediated mRNA decay protein 3
10 Sobic.010G149300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@ubiquitin-conjugating enzyme, putative, expressed K06689: UBE2D, UBC4, ubiquitin-conjugating enzyme E2 D
11 Sobic.008G189300 ubiquitin-conjugating enzyme E2 W, putative, expressed K10688: UBE2W, ubiquitin-conjugating enzyme E2 W
12 Sobic.002G083266 - K00326: cytochrome-b5 reductase
13 Sobic.004G272800 VHS and GAT domain containing protein, expressed -
14 Sobic.006G264300 GA18008-PA, putative, expressed -
15 Sobic.003G130800 pyruvate kinase, putative, expressed K00873: PK, pyruvate kinase
16 Sobic.002G204100 cytochrome c oxidase copper chaperone, putative, expressed K02260: cytochrome c oxidase assembly protein subunit 17
17 Sobic.002G045300 ubiquitin-conjugating enzyme, putative, expressed K10573: UBE2A, UBC2, ubiquitin-conjugating enzyme E2 A
18 Sobic.001G281400 expressed protein -
19 Sobic.002G153500 ras-related protein, putative, expressed K07904: Ras-related protein Rab-11A
20 Sobic.003G386000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@kinase, pfkB family, putative, expressed K00847: E2.7.1.4, fructokinase


Gene co-expression network
sample Sobic005G034400 Sobic005G034400 Sobic008G033600 Sobic008G033600 Sobic005G034400--Sobic008G033600 Sobic004G055200 Sobic004G055200 Sobic005G034400--Sobic004G055200 Sobic001G459200 Sobic001G459200 Sobic005G034400--Sobic001G459200 Sobic004G020000 Sobic004G020000 Sobic005G034400--Sobic004G020000 Sobic003G253000 Sobic003G253000 Sobic005G034400--Sobic003G253000 Sobic002G264400 Sobic002G264400 Sobic005G034400--Sobic002G264400 Sobic001G224400 Sobic001G224400 Sobic005G034400--Sobic001G224400 Sobic002G267500 Sobic002G267500 Sobic005G034400--Sobic002G267500 Sobic001G288800 Sobic001G288800 Sobic005G034400--Sobic001G288800 Sobic008G033600--Sobic004G055200 Sobic006G173900 Sobic006G173900 Sobic008G033600--Sobic006G173900 Sobic004G187900 Sobic004G187900 Sobic008G033600--Sobic004G187900 Sobic001G281400 Sobic001G281400 Sobic008G033600--Sobic001G281400 Sobic008G033600--Sobic002G267500 Sobic003G377900 Sobic003G377900 Sobic008G033600--Sobic003G377900 Sobic009G008900 Sobic009G008900 Sobic008G033600--Sobic009G008900 Sobic008G033600--Sobic001G459200 Sobic010G149300 Sobic010G149300 Sobic008G033600--Sobic010G149300 Sobic004G055200--Sobic008G033600 Sobic004G055200--Sobic001G459200 Sobic003G130800 Sobic003G130800 Sobic004G055200--Sobic003G130800 Sobic004G330700 Sobic004G330700 Sobic004G055200--Sobic004G330700 Sobic004G055200--Sobic001G281400 Sobic004G055200--Sobic004G187900 Sobic001G499300 Sobic001G499300 Sobic004G055200--Sobic001G499300 Sobic001G477300 Sobic001G477300 Sobic004G055200--Sobic001G477300 Sobic007G051000 Sobic007G051000 Sobic004G055200--Sobic007G051000 Sobic009G185800 Sobic009G185800 Sobic001G459200--Sobic009G185800 Sobic001G459200--Sobic003G253000 Sobic001G459200--Sobic001G499300 Sobic001G459200--Sobic004G055200 Sobic001G459200--Sobic002G267500 Sobic002G046100 Sobic002G046100 Sobic001G459200--Sobic002G046100 Sobic004G272800 Sobic004G272800 Sobic001G459200--Sobic004G272800 Sobic003G181500 Sobic003G181500 Sobic001G459200--Sobic003G181500 Sobic001G459200--Sobic003G130800 Sobic004G020000--Sobic005G034400 Sobic003G220600 Sobic003G220600 Sobic004G020000--Sobic003G220600 Sobic002G045300 Sobic002G045300 Sobic004G020000--Sobic002G045300 Sobic002G083266 Sobic002G083266 Sobic004G020000--Sobic002G083266 Sobic001G440700 Sobic001G440700 Sobic004G020000--Sobic001G440700 Sobic010G042100 Sobic010G042100 Sobic004G020000--Sobic010G042100 Sobic006G264300 Sobic006G264300 Sobic004G020000--Sobic006G264300 Sobic001G415000 Sobic001G415000 Sobic004G020000--Sobic001G415000 Sobic002G153500 Sobic002G153500 Sobic004G020000--Sobic002G153500 Sobic006G141500 Sobic006G141500 Sobic003G253000--Sobic006G141500 Sobic004G049900 Sobic004G049900 Sobic003G253000--Sobic004G049900 Sobic003G253000--Sobic002G267500 Sobic003G253000--Sobic004G272800 Sobic003G253000--Sobic001G459200 Sobic002G345300 Sobic002G345300 Sobic003G253000--Sobic002G345300 Sobic003G253000--Sobic002G046100 Sobic003G253000--Sobic009G185800 Sobic006G108400 Sobic006G108400 Sobic003G253000--Sobic006G108400 Sobic002G264400--Sobic006G264300 Sobic004G293700 Sobic004G293700 Sobic002G264400--Sobic004G293700 Sobic002G264400--Sobic002G267500 Sobic002G180600 Sobic002G180600 Sobic002G264400--Sobic002G180600 Sobic002G264400--Sobic003G253000 Sobic002G202300 Sobic002G202300 Sobic002G264400--Sobic002G202300 Sobic010G253800 Sobic010G253800 Sobic002G264400--Sobic010G253800 Sobic002G264400--Sobic005G034400 Sobic003G075500 Sobic003G075500 Sobic002G264400--Sobic003G075500 Sobic003G368500 Sobic003G368500 Sobic001G224400--Sobic003G368500 Sobic003G155400 Sobic003G155400 Sobic001G224400--Sobic003G155400 Sobic001G224400--Sobic002G153500 Sobic010G154700 Sobic010G154700 Sobic001G224400--Sobic010G154700 Sobic010G213400 Sobic010G213400 Sobic001G224400--Sobic010G213400 Sobic008G189300 Sobic008G189300 Sobic001G224400--Sobic008G189300 Sobic010G153100 Sobic010G153100 Sobic001G224400--Sobic010G153100 Sobic001G132100 Sobic001G132100 Sobic001G224400--Sobic001G132100 Sobic002G222900 Sobic002G222900 Sobic001G224400--Sobic002G222900 Sobic002G267500--Sobic001G281400 Sobic002G267500--Sobic004G272800 Sobic002G267500--Sobic002G046100 Sobic002G267500--Sobic003G253000 Sobic002G267500--Sobic010G149300 Sobic002G267500--Sobic002G345300 Sobic002G267500--Sobic001G459200 Sobic009G143400 Sobic009G143400 Sobic002G267500--Sobic009G143400 Sobic002G267500--Sobic006G173900 Sobic001G288800--Sobic003G181500 Sobic010G150575 Sobic010G150575 Sobic001G288800--Sobic010G150575 Sobic001G288800--Sobic001G281400 Sobic003G350300 Sobic003G350300 Sobic001G288800--Sobic003G350300 Sobic001G177800 Sobic001G177800 Sobic001G288800--Sobic001G177800 Sobic010G243200 Sobic010G243200 Sobic001G288800--Sobic010G243200 Sobic003G321700 Sobic003G321700 Sobic001G288800--Sobic003G321700 Sobic001G288800--Sobic004G187900 Sobic001G288800--Sobic006G173900
Octagon: transcription factors


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