Gene annotation
Transcriptome id Sobic.009G243400.1
Synonym Sb09g029490
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
cinnamoyl-CoA reductase-related, putative, expressed
UniProt C5YW48
Pfam PF01073
Panther DB PTHR10366 PTHR10366:SF453
NCBI CDD KOG1502; Flavonol reductase/cinnamoyl-CoA reductase
KEGG Orthology -
Gene Ontology GO:0016616; oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor GO:0006694steroid biosynthetic process GO:00038543-beta-hydroxy-delta5-steroid dehydrogenase activity


Orthologs (automatic annotation)
TAIR AT5G14700 : NAD(P)-binding Rossmann-fold superfamily protein
RAP-DB (Rice) LOC_Os05g50250.1 : cinnamoyl-CoA reductase-related, putative, expressed
MaizeGDB (Corn) Zm00025a036689
Brachypodium KQK04642 , KQK08900 , KQK08899
Barley HORVU1Hr1G091350.1 , HORVU1Hr1G091350.3 , HORVU1Hr1G091350.2
Wheat TraesCS1B02G447900 , TraesCS1A02G417800
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G148100 MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
2 Sobic.001G254100 "PGL1(Ortholog in rice:Heang and Sassa, 2012)"(PubMedID : 31659838)@bHLH family protein, putative, expressed -
3 Sobic.001G483400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@lipoxygenase protein, putative, expressed K00454: lipoxygenase
4 Sobic.004G024300 cyclin, putative, expressed -
5 Sobic.001G076100 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
6 Sobic.007G178000 heat shock protein DnaJ, putative, expressed -
7 Sobic.006G046900 expressed protein -
8 Sobic.003G123600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
9 Sobic.010G031300 auxin-induced protein 5NG4, putative, expressed -
10 Sobic.001G107800 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
11 Sobic.002G261200 expressed protein -
12 Sobic.006G190500 expressed protein -
13 Sobic.002G335300 uncharacterized Cys-rich domain containing protein, putative, expressed -
14 Sobic.003G148600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@Not investigated(PubMedID : 23766026)@AP2 domain containing protein, expressed -
15 Sobic.001G169500 - -
16 Sobic.008G103700 nitrilase-associated protein, putative, expressed K18635: protein SPIRAL1 and related proteins
17 Sobic.003G382800 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@expressed protein -
18 Sobic.010G198600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
19 Sobic.004G212900 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@B4-BTB1 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with B4 subfamily conserved sequence, expressed -
20 Sobic.006G230800 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@wound induced protein, putative, expressed -


Gene co-expression network
sample Sobic009G243400 Sobic009G243400 Sobic009G148100 Sobic009G148100 Sobic009G243400--Sobic009G148100 Sobic001G254100 Sobic001G254100 Sobic009G243400--Sobic001G254100 Sobic001G483400 Sobic001G483400 Sobic009G243400--Sobic001G483400 Sobic004G024300 Sobic004G024300 Sobic009G243400--Sobic004G024300 Sobic001G076100 Sobic001G076100 Sobic009G243400--Sobic001G076100 Sobic007G178000 Sobic007G178000 Sobic009G243400--Sobic007G178000 Sobic006G046900 Sobic006G046900 Sobic009G243400--Sobic006G046900 Sobic003G123600 Sobic003G123600 Sobic009G243400--Sobic003G123600 Sobic010G031300 Sobic010G031300 Sobic009G243400--Sobic010G031300 Sobic006G190100 Sobic006G190100 Sobic009G148100--Sobic006G190100 Sobic010G198600 Sobic010G198600 Sobic009G148100--Sobic010G198600 Sobic001G105900 Sobic001G105900 Sobic009G148100--Sobic001G105900 Sobic006G190500 Sobic006G190500 Sobic009G148100--Sobic006G190500 Sobic009G148100--Sobic001G076100 Sobic001G443800 Sobic001G443800 Sobic009G148100--Sobic001G443800 Sobic002G389000 Sobic002G389000 Sobic009G148100--Sobic002G389000 Sobic004G088300 Sobic004G088300 Sobic009G148100--Sobic004G088300 Sobic002G291900 Sobic002G291900 Sobic009G148100--Sobic002G291900 Sobic002G068600 Sobic002G068600 Sobic001G254100--Sobic002G068600 Sobic001G107800 Sobic001G107800 Sobic001G254100--Sobic001G107800 Sobic003G394400 Sobic003G394400 Sobic001G254100--Sobic003G394400 Sobic002G261200 Sobic002G261200 Sobic001G254100--Sobic002G261200 Sobic004G166200 Sobic004G166200 Sobic001G254100--Sobic004G166200 Sobic001G149800 Sobic001G149800 Sobic001G254100--Sobic001G149800 Sobic007G214400 Sobic007G214400 Sobic001G254100--Sobic007G214400 Sobic001G254100--Sobic002G389000 Sobic003G086600 Sobic003G086600 Sobic001G254100--Sobic003G086600 Sobic005G010200 Sobic005G010200 Sobic001G483400--Sobic005G010200 Sobic010G220200 Sobic010G220200 Sobic001G483400--Sobic010G220200 Sobic009G129000 Sobic009G129000 Sobic001G483400--Sobic009G129000 Sobic002G174200 Sobic002G174200 Sobic001G483400--Sobic002G174200 Sobic004G065500 Sobic004G065500 Sobic001G483400--Sobic004G065500 Sobic006G230900 Sobic006G230900 Sobic001G483400--Sobic006G230900 Sobic001G483400--Sobic006G190500 Sobic010G217800 Sobic010G217800 Sobic001G483400--Sobic010G217800 Sobic002G082600 Sobic002G082600 Sobic001G483400--Sobic002G082600 Sobic006G189700 Sobic006G189700 Sobic004G024300--Sobic006G189700 Sobic002G388700 Sobic002G388700 Sobic004G024300--Sobic002G388700 Sobic008G103700 Sobic008G103700 Sobic004G024300--Sobic008G103700 Sobic004G024300--Sobic009G243400 Sobic002G335300 Sobic002G335300 Sobic004G024300--Sobic002G335300 Sobic004G171400 Sobic004G171400 Sobic004G024300--Sobic004G171400 Sobic004G024300--Sobic010G198600 Sobic002G396400 Sobic002G396400 Sobic004G024300--Sobic002G396400 Sobic004G024300--Sobic009G148100 Sobic001G201200 Sobic001G201200 Sobic001G076100--Sobic001G201200 Sobic001G076100--Sobic001G443800 Sobic001G076100--Sobic003G123600 Sobic001G371800 Sobic001G371800 Sobic001G076100--Sobic001G371800 Sobic001G076100--Sobic001G107800 Sobic001G076100--Sobic002G389000 Sobic003G148600 Sobic003G148600 Sobic001G076100--Sobic003G148600 Sobic003G197200 Sobic003G197200 Sobic001G076100--Sobic003G197200 Sobic006G230600 Sobic006G230600 Sobic001G076100--Sobic006G230600 Sobic003G377100 Sobic003G377100 Sobic007G178000--Sobic003G377100 Sobic007G178000--Sobic003G197200 Sobic007G147700 Sobic007G147700 Sobic007G178000--Sobic007G147700 Sobic003G355100 Sobic003G355100 Sobic007G178000--Sobic003G355100 Sobic001G481300 Sobic001G481300 Sobic007G178000--Sobic001G481300 Sobic001G397300 Sobic001G397300 Sobic007G178000--Sobic001G397300 Sobic007G178000--Sobic003G148600 Sobic003G144700 Sobic003G144700 Sobic007G178000--Sobic003G144700 Sobic002G407100 Sobic002G407100 Sobic007G178000--Sobic002G407100 Sobic001G169500 Sobic001G169500 Sobic006G046900--Sobic001G169500 Sobic005G011300 Sobic005G011300 Sobic006G046900--Sobic005G011300 Sobic006G249300 Sobic006G249300 Sobic006G046900--Sobic006G249300 Sobic001G139100 Sobic001G139100 Sobic006G046900--Sobic001G139100 Sobic006G046900--Sobic003G377100 Sobic001G459800 Sobic001G459800 Sobic006G046900--Sobic001G459800 Sobic008G186100 Sobic008G186100 Sobic006G046900--Sobic008G186100 Sobic004G336500 Sobic004G336500 Sobic006G046900--Sobic004G336500 Sobic006G046900--Sobic002G068600 Sobic003G123600--Sobic003G148600 Sobic003G123600--Sobic001G107800 Sobic002G415600 Sobic002G415600 Sobic003G123600--Sobic002G415600 Sobic003G123600--Sobic003G197200 Sobic003G123600--Sobic003G144700 Sobic003G123600--Sobic001G076100 Sobic006G230800 Sobic006G230800 Sobic003G123600--Sobic006G230800 Sobic003G123600--Sobic006G190500 Sobic003G123600--Sobic001G443800 Sobic001G309600 Sobic001G309600 Sobic010G031300--Sobic001G309600 Sobic010G031300--Sobic001G254100 Sobic002G215300 Sobic002G215300 Sobic010G031300--Sobic002G215300 Sobic010G031300--Sobic003G086600 Sobic010G031300--Sobic001G107800 Sobic001G397200 Sobic001G397200 Sobic010G031300--Sobic001G397200 Sobic010G031300--Sobic003G394400 Sobic010G032100 Sobic010G032100 Sobic010G031300--Sobic010G032100 Sobic010G031300--Sobic002G261200
Octagon: transcription factors


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