Gene annotation
Transcriptome id Sobic.009G232266.1
Synonym -
Functional annotation -
UniProt A0A1Z5R3S6
Pfam PF00462
Panther DB PTHR10168 PTHR10168:SF90
NCBI CDD KOG1752; Glutaredoxin and related proteins
KEGG Orthology -
Gene Ontology GO:0015035; protein disulfide oxidoreductase activity GO:0009055electron transfer activity


Orthologs (automatic annotation)
TAIR AT1G28480 : Thioredoxin superfamily protein
RAP-DB (Rice) LOC_Os01g47760.1 : OsGrx_I1 - glutaredoxin subgroup III, expressed
MaizeGDB (Corn) Zm00025a028121 , Zm00025a038763 , Zm00025a036609 , Zm00025a044567
Brachypodium KQK04880 , PNT72555
Barley HORVU3Hr1G072040.1 , HORVU2Hr1G057870.1 , HORVU1Hr1G092260.1 , HORVU1Hr1G087600.1 , HORVU4Hr1G057430.1 , HORVU1Hr1G087630.1 , HORVU1Hr1G087630.3 , HORVU1Hr1G087630.2 , HORVU3Hr1G065250.1
Wheat TraesCS1D02G405200 , TraesCS4A02G254400 , TraesCS3A02G147400 , TraesCS2A02G232700 , TraesCS5A02G064100
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G357500 amino acid permease family protein, putative, expressed -
2 Sobic.009G236800 DUF1645 domain containing protein, putative, expressed -
3 Sobic.003G277500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@methyltransferase, putative, expressed -
4 Sobic.003G271201 - -
5 Sobic.008G113000 Ser/Thr protein phosphatase family protein, putative, expressed -
6 Sobic.003G041600 DUF623 domain containing protein, expressed -
7 Sobic.005G155600 LYK, putative, expressed -
8 Sobic.004G010300 glycerol-3-phosphate acyltransferase, putative, expressed K13508: glycerol-3-phosphate acyltransferase
9 Sobic.010G178200 hemoglobin-like protein HbO, putative, expressed -
10 Sobic.002G407700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@sex determination protein tasselseed-2, putative, expressed -
11 Sobic.002G070200 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@LTPL84 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
12 Sobic.003G162700 expressed protein -
13 Sobic.002G057600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
14 Sobic.001G234800 inorganic phosphate transporter, putative, expressed K08176: MFS transporter, PHS family, inorganic phosphate transporter
15 Sobic.006G044932 - -
16 Sobic.001G280700 acyl-desaturase, chloroplast precursor, putative, expressed K03921: FAB2, SSI2, acyl-[acyl-carrier-protein] desaturase
17 Sobic.001G398700 expressed protein -
18 Sobic.001G093900 stem-specific protein TSJT1, putative, expressed -
19 Sobic.003G082600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@OsCML16 - Calmodulin-related calcium sensor protein, expressed K13448: calcium-binding protein CML
20 Sobic.004G195000 heavy metal transport/detoxification protein, putative, expressed -


Gene co-expression network
sample Sobic009G232266 Sobic009G232266 Sobic001G357500 Sobic001G357500 Sobic009G232266--Sobic001G357500 Sobic009G236800 Sobic009G236800 Sobic009G232266--Sobic009G236800 Sobic003G277500 Sobic003G277500 Sobic009G232266--Sobic003G277500 Sobic003G271201 Sobic003G271201 Sobic009G232266--Sobic003G271201 Sobic008G113000 Sobic008G113000 Sobic009G232266--Sobic008G113000 Sobic003G041600 Sobic003G041600 Sobic009G232266--Sobic003G041600 Sobic005G155600 Sobic005G155600 Sobic009G232266--Sobic005G155600 Sobic004G010300 Sobic004G010300 Sobic009G232266--Sobic004G010300 Sobic010G178200 Sobic010G178200 Sobic009G232266--Sobic010G178200 Sobic001G357500--Sobic009G232266 Sobic001G234800 Sobic001G234800 Sobic001G357500--Sobic001G234800 Sobic001G259900 Sobic001G259900 Sobic001G357500--Sobic001G259900 Sobic005G109000 Sobic005G109000 Sobic001G357500--Sobic005G109000 Sobic009G198600 Sobic009G198600 Sobic001G357500--Sobic009G198600 Sobic006G101100 Sobic006G101100 Sobic001G357500--Sobic006G101100 Sobic003G082600 Sobic003G082600 Sobic001G357500--Sobic003G082600 Sobic003G102200 Sobic003G102200 Sobic001G357500--Sobic003G102200 Sobic001G357500--Sobic003G041600 Sobic009G236800--Sobic009G232266 Sobic009G236800--Sobic003G271201 Sobic009G236800--Sobic003G041600 Sobic009G236800--Sobic001G357500 Sobic002G034500 Sobic002G034500 Sobic009G236800--Sobic002G034500 Sobic009G069800 Sobic009G069800 Sobic009G236800--Sobic009G069800 Sobic010G274900 Sobic010G274900 Sobic009G236800--Sobic010G274900 Sobic010G135000 Sobic010G135000 Sobic009G236800--Sobic010G135000 Sobic001G486100 Sobic001G486100 Sobic009G236800--Sobic001G486100 Sobic006G044932 Sobic006G044932 Sobic003G277500--Sobic006G044932 Sobic003G277500--Sobic004G010300 Sobic003G162700 Sobic003G162700 Sobic003G277500--Sobic003G162700 Sobic002G070200 Sobic002G070200 Sobic003G277500--Sobic002G070200 Sobic002G407700 Sobic002G407700 Sobic003G277500--Sobic002G407700 Sobic003G277500--Sobic009G232266 Sobic002G373001 Sobic002G373001 Sobic003G277500--Sobic002G373001 Sobic002G333300 Sobic002G333300 Sobic003G277500--Sobic002G333300 Sobic004G195000 Sobic004G195000 Sobic003G277500--Sobic004G195000 Sobic006G206000 Sobic006G206000 Sobic003G271201--Sobic006G206000 Sobic003G290300 Sobic003G290300 Sobic003G271201--Sobic003G290300 Sobic003G271201--Sobic009G232266 Sobic004G212900 Sobic004G212900 Sobic003G271201--Sobic004G212900 Sobic003G271201--Sobic003G162700 Sobic003G271201--Sobic004G010300 Sobic003G331600 Sobic003G331600 Sobic003G271201--Sobic003G331600 Sobic003G271201--Sobic010G135000 Sobic003G271201--Sobic009G236800 Sobic002G319100 Sobic002G319100 Sobic008G113000--Sobic002G319100 Sobic008G113000--Sobic003G041600 Sobic007G025500 Sobic007G025500 Sobic008G113000--Sobic007G025500 Sobic008G113000--Sobic003G162700 Sobic010G166500 Sobic010G166500 Sobic008G113000--Sobic010G166500 Sobic002G345850 Sobic002G345850 Sobic008G113000--Sobic002G345850 Sobic002G302500 Sobic002G302500 Sobic008G113000--Sobic002G302500 Sobic008G113000--Sobic010G178200 Sobic001G091600 Sobic001G091600 Sobic008G113000--Sobic001G091600 Sobic009G221400 Sobic009G221400 Sobic003G041600--Sobic009G221400 Sobic008G044300 Sobic008G044300 Sobic003G041600--Sobic008G044300 Sobic006G143400 Sobic006G143400 Sobic003G041600--Sobic006G143400 Sobic003G041600--Sobic009G069800 Sobic003G364300 Sobic003G364300 Sobic003G041600--Sobic003G364300 Sobic003G041600--Sobic001G091600 Sobic003G041600--Sobic010G166500 Sobic001G477600 Sobic001G477600 Sobic003G041600--Sobic001G477600 Sobic010G156500 Sobic010G156500 Sobic003G041600--Sobic010G156500 Sobic001G345400 Sobic001G345400 Sobic005G155600--Sobic001G345400 Sobic005G155600--Sobic009G232266 Sobic005G155600--Sobic003G277500 Sobic004G110400 Sobic004G110400 Sobic005G155600--Sobic004G110400 Sobic005G155600--Sobic004G195000 Sobic003G296300 Sobic003G296300 Sobic005G155600--Sobic003G296300 Sobic006G246100 Sobic006G246100 Sobic005G155600--Sobic006G246100 Sobic005G155600--Sobic001G357500 Sobic005G155600--Sobic004G010300 Sobic004G010300--Sobic003G277500 Sobic001G536500 Sobic001G536500 Sobic004G010300--Sobic001G536500 Sobic009G065300 Sobic009G065300 Sobic004G010300--Sobic009G065300 Sobic004G010300--Sobic002G070200 Sobic004G186500 Sobic004G186500 Sobic004G010300--Sobic004G186500 Sobic004G010300--Sobic003G162700 Sobic009G230100 Sobic009G230100 Sobic004G010300--Sobic009G230100 Sobic004G010300--Sobic006G044932 Sobic010G194300 Sobic010G194300 Sobic004G010300--Sobic010G194300 Sobic002G345300 Sobic002G345300 Sobic010G178200--Sobic002G345300 Sobic003G285800 Sobic003G285800 Sobic010G178200--Sobic003G285800 Sobic003G350300 Sobic003G350300 Sobic010G178200--Sobic003G350300 Sobic010G041600 Sobic010G041600 Sobic010G178200--Sobic010G041600 Sobic001G034700 Sobic001G034700 Sobic010G178200--Sobic001G034700 Sobic001G281400 Sobic001G281400 Sobic010G178200--Sobic001G281400 Sobic002G046100 Sobic002G046100 Sobic010G178200--Sobic002G046100 Sobic010G178200--Sobic010G274900 Sobic007G087200 Sobic007G087200 Sobic010G178200--Sobic007G087200
Octagon: transcription factors


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