Gene annotation
Transcriptome id Sobic.001G398700.1
Synonym Sb01g037750
Functional annotation expressed protein
UniProt C5WMK1
Pfam PF12023
Panther DB PTHR33193 PTHR33193:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G11970 : Protein of unknown function (DUF3511)
RAP-DB (Rice) LOC_Os03g19040.1 : expressed protein
MaizeGDB (Corn) Zm00025a052601 , Zm00025a043407 , Zm00025a002095
Brachypodium KQK22043 , KQK22042
Barley HORVU4Hr1G054500.2 , HORVU4Hr1G054500.1
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G135000 thioredoxin reductase 2, putative, expressed K00384: trxB, thioredoxin reductase (NADPH)
2 Sobic.001G067601 - K17553: protein phosphatase 1 regulatory subunit 11
3 Sobic.010G178200 hemoglobin-like protein HbO, putative, expressed -
4 Sobic.002G345300 ZOS7-05 - C2H2 zinc finger protein, expressed -
5 Sobic.009G023200 glycine-rich protein A3, putative, expressed -
6 Sobic.005G228000 SNF7 domain containing protein, putative, expressed K12191: charged multivesicular body protein 2A
7 Sobic.001G477300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@GRAM domain containing protein, expressed -
8 Sobic.003G162700 expressed protein -
9 Sobic.001G533300 mitochondrial import inner membrane translocase subunit Tim17, putative, expressed K17794: mitochondrial import inner membrane translocase subunit TIM23
10 Sobic.002G212200 protein binding protein, putative, expressed K11975: E3 ubiquitin-protein ligase RNF144
11 Sobic.003G380000 expressed protein -
12 Sobic.003G350300 ubiquitin-conjugating enzyme, putative, expressed K10575: UBE2G1, ubiquitin-conjugating enzyme E2 G1
13 Sobic.001G019900 zinc finger, C3HC4 type domain containing protein, expressed K15707: RING finger protein 170
14 Sobic.009G046600 stress-related protein, putative, expressed -
15 Sobic.006G180200 transmembrane amino acid transporter protein, putative, expressed K14209: SLC36A, solute carrier family 36 (proton-coupled amino acid transporter)
16 Sobic.004G157000 protein kinase domain containing protein, expressed K13430: serine/threonine-protein kinase PBS1
17 Sobic.002G046100 zinc finger A20 and AN1 domain-containing stress-associated protein, putative, expressed -
18 Sobic.003G130800 pyruvate kinase, putative, expressed K00873: PK, pyruvate kinase
19 Sobic.004G247600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@hydrolase, NUDIX family, domain containing protein, expressed K07766: diphosphoinositol-polyphosphate diphosphatase
20 Sobic.002G245800 AN1-like zinc finger domain containing protein, expressed -


Gene co-expression network
sample Sobic001G398700 Sobic001G398700 Sobic010G135000 Sobic010G135000 Sobic001G398700--Sobic010G135000 Sobic001G067601 Sobic001G067601 Sobic001G398700--Sobic001G067601 Sobic010G178200 Sobic010G178200 Sobic001G398700--Sobic010G178200 Sobic002G345300 Sobic002G345300 Sobic001G398700--Sobic002G345300 Sobic009G023200 Sobic009G023200 Sobic001G398700--Sobic009G023200 Sobic005G228000 Sobic005G228000 Sobic001G398700--Sobic005G228000 Sobic001G477300 Sobic001G477300 Sobic001G398700--Sobic001G477300 Sobic003G162700 Sobic003G162700 Sobic001G398700--Sobic003G162700 Sobic001G533300 Sobic001G533300 Sobic001G398700--Sobic001G533300 Sobic003G130800 Sobic003G130800 Sobic010G135000--Sobic003G130800 Sobic006G180200 Sobic006G180200 Sobic010G135000--Sobic006G180200 Sobic010G135000--Sobic002G345300 Sobic003G181500 Sobic003G181500 Sobic010G135000--Sobic003G181500 Sobic001G459200 Sobic001G459200 Sobic010G135000--Sobic001G459200 Sobic010G135000--Sobic009G023200 Sobic003G350300 Sobic003G350300 Sobic010G135000--Sobic003G350300 Sobic004G330700 Sobic004G330700 Sobic010G135000--Sobic004G330700 Sobic009G185800 Sobic009G185800 Sobic010G135000--Sobic009G185800 Sobic001G019900 Sobic001G019900 Sobic001G067601--Sobic001G019900 Sobic001G067601--Sobic009G023200 Sobic002G046100 Sobic002G046100 Sobic001G067601--Sobic002G046100 Sobic010G217900 Sobic010G217900 Sobic001G067601--Sobic010G217900 Sobic003G063200 Sobic003G063200 Sobic001G067601--Sobic003G063200 Sobic001G037000 Sobic001G037000 Sobic001G067601--Sobic001G037000 Sobic001G067601--Sobic005G228000 Sobic001G067601--Sobic003G181500 Sobic001G067601--Sobic003G162700 Sobic010G178200--Sobic002G345300 Sobic003G285800 Sobic003G285800 Sobic010G178200--Sobic003G285800 Sobic010G178200--Sobic003G350300 Sobic010G041600 Sobic010G041600 Sobic010G178200--Sobic010G041600 Sobic001G034700 Sobic001G034700 Sobic010G178200--Sobic001G034700 Sobic001G281400 Sobic001G281400 Sobic010G178200--Sobic001G281400 Sobic010G178200--Sobic002G046100 Sobic010G274900 Sobic010G274900 Sobic010G178200--Sobic010G274900 Sobic007G087200 Sobic007G087200 Sobic010G178200--Sobic007G087200 Sobic002G345300--Sobic002G046100 Sobic002G345300--Sobic003G350300 Sobic002G345300--Sobic001G281400 Sobic002G345300--Sobic010G178200 Sobic002G267500 Sobic002G267500 Sobic002G345300--Sobic002G267500 Sobic003G253000 Sobic003G253000 Sobic002G345300--Sobic003G253000 Sobic002G345300--Sobic003G285800 Sobic004G272800 Sobic004G272800 Sobic002G345300--Sobic004G272800 Sobic010G149300 Sobic010G149300 Sobic002G345300--Sobic010G149300 Sobic004G187900 Sobic004G187900 Sobic009G023200--Sobic004G187900 Sobic010G204600 Sobic010G204600 Sobic009G023200--Sobic010G204600 Sobic009G023200--Sobic003G063200 Sobic009G023200--Sobic001G067601 Sobic009G023200--Sobic002G046100 Sobic002G245800 Sobic002G245800 Sobic009G023200--Sobic002G245800 Sobic009G023200--Sobic003G181500 Sobic003G202200 Sobic003G202200 Sobic009G023200--Sobic003G202200 Sobic005G196800 Sobic005G196800 Sobic009G023200--Sobic005G196800 Sobic005G228000--Sobic001G019900 Sobic002G212200 Sobic002G212200 Sobic005G228000--Sobic002G212200 Sobic005G228000--Sobic001G067601 Sobic005G228000--Sobic002G345300 Sobic005G228000--Sobic009G023200 Sobic004G157000 Sobic004G157000 Sobic005G228000--Sobic004G157000 Sobic005G228000--Sobic003G350300 Sobic009G094450 Sobic009G094450 Sobic005G228000--Sobic009G094450 Sobic010G047400 Sobic010G047400 Sobic005G228000--Sobic010G047400 Sobic001G124600 Sobic001G124600 Sobic001G477300--Sobic001G124600 Sobic001G477300--Sobic004G187900 Sobic001G477300--Sobic002G046100 Sobic001G308300 Sobic001G308300 Sobic001G477300--Sobic001G308300 Sobic010G086200 Sobic010G086200 Sobic001G477300--Sobic010G086200 Sobic006G267200 Sobic006G267200 Sobic001G477300--Sobic006G267200 Sobic009G129000 Sobic009G129000 Sobic001G477300--Sobic009G129000 Sobic009G159400 Sobic009G159400 Sobic001G477300--Sobic009G159400 Sobic004G065500 Sobic004G065500 Sobic001G477300--Sobic004G065500 Sobic003G162700--Sobic001G067601 Sobic009G070400 Sobic009G070400 Sobic003G162700--Sobic009G070400 Sobic002G333400 Sobic002G333400 Sobic003G162700--Sobic002G333400 Sobic006G158600 Sobic006G158600 Sobic003G162700--Sobic006G158600 Sobic003G334600 Sobic003G334600 Sobic003G162700--Sobic003G334600 Sobic010G238600 Sobic010G238600 Sobic003G162700--Sobic010G238600 Sobic003G162700--Sobic010G274900 Sobic007G025500 Sobic007G025500 Sobic003G162700--Sobic007G025500 Sobic008G136400 Sobic008G136400 Sobic003G162700--Sobic008G136400 Sobic001G533300--Sobic001G067601 Sobic002G222900 Sobic002G222900 Sobic001G533300--Sobic002G222900 Sobic001G224400 Sobic001G224400 Sobic001G533300--Sobic001G224400 Sobic003G368500 Sobic003G368500 Sobic001G533300--Sobic003G368500 Sobic001G533300--Sobic010G217900 Sobic001G308700 Sobic001G308700 Sobic001G533300--Sobic001G308700 Sobic008G189300 Sobic008G189300 Sobic001G533300--Sobic008G189300 Sobic006G010600 Sobic006G010600 Sobic001G533300--Sobic006G010600 Sobic010G225300 Sobic010G225300 Sobic001G533300--Sobic010G225300
Octagon: transcription factors


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