Gene annotation
Transcriptome id Sobic.003G380000.2,Sobic.003G380000.1
Synonym Sb03g041970
Functional annotation expressed protein
UniProt A0A1B6Q7C8 , A0A1B6Q7D1
Pfam -
Panther DB PTHR33646 PTHR33646:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G10080 : -
RAP-DB (Rice) LOC_Os01g66150.1 : expressed protein
MaizeGDB (Corn) Zm00025a039489 , Zm00025a026537
Brachypodium KQK10933
Barley -
Wheat TraesCS3B02G439400 , TraesCS3B02G439400 , TraesCS3A02G405600
Populus -


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cDNA sequences
Sobic.003G380000


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G232100 Constitutively expressed genes(PubMedID : 24456189)@ubiquitin family protein, putative, expressed K08770: ubiquitin C
K08770: ubiquitin C
K04551: ubiquitin B
2 Sobic.005G228000 SNF7 domain containing protein, putative, expressed K12191: charged multivesicular body protein 2A
3 Sobic.002G345300 ZOS7-05 - C2H2 zinc finger protein, expressed -
4 Sobic.010G178200 hemoglobin-like protein HbO, putative, expressed -
5 Sobic.003G285800 ubiquitin domain-containing protein 1, putative, expressed -
6 Sobic.010G135000 thioredoxin reductase 2, putative, expressed K00384: trxB, thioredoxin reductase (NADPH)
7 Sobic.009G046600 stress-related protein, putative, expressed -
8 Sobic.004G157000 protein kinase domain containing protein, expressed K13430: serine/threonine-protein kinase PBS1
9 Sobic.002G046100 zinc finger A20 and AN1 domain-containing stress-associated protein, putative, expressed -
10 Sobic.003G130800 pyruvate kinase, putative, expressed K00873: PK, pyruvate kinase
11 Sobic.001G040800 ADP-ribosylation factor, putative, expressed K07937: ADP-ribosylation factor 1/2
K07977: Arf/Sar family, other
12 Sobic.003G377900 chitin-inducible gibberellin-responsive protein, putative, expressed -
13 Sobic.001G398700 expressed protein -
14 Sobic.008G033600 Pyruvate kinase family protein(PubMedID : 26465154)@pyruvate kinase, putative, expressed K00873: PK, pyruvate kinase
15 Sobic.003G350300 ubiquitin-conjugating enzyme, putative, expressed K10575: UBE2G1, ubiquitin-conjugating enzyme E2 G1
16 Sobic.006G180200 transmembrane amino acid transporter protein, putative, expressed K14209: SLC36A, solute carrier family 36 (proton-coupled amino acid transporter)
17 Sobic.003G181500 ZOS1-09 - C2H2 zinc finger protein, expressed -
18 Sobic.001G459200 MYB family transcription factor, putative, expressed -
19 Sobic.010G149300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@ubiquitin-conjugating enzyme, putative, expressed K06689: UBE2D, UBC4, ubiquitin-conjugating enzyme E2 D
20 Sobic.003G253000 ubiquitin-conjugating enzyme, putative, expressed K10580: UBE2N, BLU, ubiquitin-conjugating enzyme E2 N


Gene co-expression network
sample Sobic003G380000 Sobic003G380000 Sobic010G232100 Sobic010G232100 Sobic003G380000--Sobic010G232100 Sobic005G228000 Sobic005G228000 Sobic003G380000--Sobic005G228000 Sobic002G345300 Sobic002G345300 Sobic003G380000--Sobic002G345300 Sobic010G178200 Sobic010G178200 Sobic003G380000--Sobic010G178200 Sobic003G285800 Sobic003G285800 Sobic003G380000--Sobic003G285800 Sobic010G135000 Sobic010G135000 Sobic003G380000--Sobic010G135000 Sobic009G046600 Sobic009G046600 Sobic003G380000--Sobic009G046600 Sobic004G157000 Sobic004G157000 Sobic003G380000--Sobic004G157000 Sobic002G046100 Sobic002G046100 Sobic003G380000--Sobic002G046100 Sobic004G055200 Sobic004G055200 Sobic010G232100--Sobic004G055200 Sobic008G025500 Sobic008G025500 Sobic010G232100--Sobic008G025500 Sobic003G130800 Sobic003G130800 Sobic010G232100--Sobic003G130800 Sobic010G232100--Sobic010G178200 Sobic006G180200 Sobic006G180200 Sobic010G232100--Sobic006G180200 Sobic010G232100--Sobic009G046600 Sobic010G232100--Sobic003G380000 Sobic004G219300 Sobic004G219300 Sobic010G232100--Sobic004G219300 Sobic006G099700 Sobic006G099700 Sobic010G232100--Sobic006G099700 Sobic001G019900 Sobic001G019900 Sobic005G228000--Sobic001G019900 Sobic002G212200 Sobic002G212200 Sobic005G228000--Sobic002G212200 Sobic001G067601 Sobic001G067601 Sobic005G228000--Sobic001G067601 Sobic005G228000--Sobic002G345300 Sobic009G023200 Sobic009G023200 Sobic005G228000--Sobic009G023200 Sobic005G228000--Sobic004G157000 Sobic003G350300 Sobic003G350300 Sobic005G228000--Sobic003G350300 Sobic009G094450 Sobic009G094450 Sobic005G228000--Sobic009G094450 Sobic010G047400 Sobic010G047400 Sobic005G228000--Sobic010G047400 Sobic002G345300--Sobic002G046100 Sobic002G345300--Sobic003G350300 Sobic001G281400 Sobic001G281400 Sobic002G345300--Sobic001G281400 Sobic002G345300--Sobic010G178200 Sobic002G267500 Sobic002G267500 Sobic002G345300--Sobic002G267500 Sobic003G253000 Sobic003G253000 Sobic002G345300--Sobic003G253000 Sobic002G345300--Sobic003G285800 Sobic004G272800 Sobic004G272800 Sobic002G345300--Sobic004G272800 Sobic010G149300 Sobic010G149300 Sobic002G345300--Sobic010G149300 Sobic010G178200--Sobic002G345300 Sobic010G178200--Sobic003G285800 Sobic010G178200--Sobic003G350300 Sobic010G041600 Sobic010G041600 Sobic010G178200--Sobic010G041600 Sobic001G034700 Sobic001G034700 Sobic010G178200--Sobic001G034700 Sobic010G178200--Sobic001G281400 Sobic010G178200--Sobic002G046100 Sobic010G274900 Sobic010G274900 Sobic010G178200--Sobic010G274900 Sobic007G087200 Sobic007G087200 Sobic010G178200--Sobic007G087200 Sobic003G285800--Sobic002G046100 Sobic002G187500 Sobic002G187500 Sobic003G285800--Sobic002G187500 Sobic003G285800--Sobic010G178200 Sobic003G285800--Sobic003G350300 Sobic003G285800--Sobic002G345300 Sobic001G477300 Sobic001G477300 Sobic003G285800--Sobic001G477300 Sobic003G285800--Sobic001G281400 Sobic010G086200 Sobic010G086200 Sobic003G285800--Sobic010G086200 Sobic009G129000 Sobic009G129000 Sobic003G285800--Sobic009G129000 Sobic010G135000--Sobic003G130800 Sobic010G135000--Sobic006G180200 Sobic010G135000--Sobic002G345300 Sobic003G181500 Sobic003G181500 Sobic010G135000--Sobic003G181500 Sobic001G459200 Sobic001G459200 Sobic010G135000--Sobic001G459200 Sobic010G135000--Sobic009G023200 Sobic010G135000--Sobic003G350300 Sobic004G330700 Sobic004G330700 Sobic010G135000--Sobic004G330700 Sobic009G185800 Sobic009G185800 Sobic010G135000--Sobic009G185800 Sobic009G046600--Sobic004G157000 Sobic005G028700 Sobic005G028700 Sobic009G046600--Sobic005G028700 Sobic009G046600--Sobic009G129000 Sobic001G399100 Sobic001G399100 Sobic009G046600--Sobic001G399100 Sobic010G041700 Sobic010G041700 Sobic009G046600--Sobic010G041700 Sobic009G046600--Sobic009G023200 Sobic002G245800 Sobic002G245800 Sobic009G046600--Sobic002G245800 Sobic009G046600--Sobic010G178200 Sobic007G151100 Sobic007G151100 Sobic009G046600--Sobic007G151100 Sobic010G204600 Sobic010G204600 Sobic004G157000--Sobic010G204600 Sobic004G157000--Sobic009G046600 Sobic003G249800 Sobic003G249800 Sobic004G157000--Sobic003G249800 Sobic004G157000--Sobic002G046100 Sobic004G157000--Sobic009G129000 Sobic004G157000--Sobic009G023200 Sobic009G033700 Sobic009G033700 Sobic004G157000--Sobic009G033700 Sobic004G157000--Sobic002G345300 Sobic004G157000--Sobic003G285800 Sobic002G046100--Sobic003G285800 Sobic002G046100--Sobic001G281400 Sobic002G046100--Sobic002G345300 Sobic002G046100--Sobic002G187500 Sobic002G046100--Sobic010G086200 Sobic004G061200 Sobic004G061200 Sobic002G046100--Sobic004G061200 Sobic002G046100--Sobic001G477300 Sobic002G046100--Sobic002G267500 Sobic002G190900 Sobic002G190900 Sobic002G046100--Sobic002G190900
Octagon: transcription factors


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