Gene annotation
Transcriptome id Sobic.010G232100.3,Sobic.010G232100.2,Sobic.010G232100.4,Sobic.010G232100.5,Sobic.010G232100.1
Synonym UB, UBQ10, Sb10g027470
Functional annotation Constitutively expressed genes (PubMedID : 24456189)
ubiquitin family protein, putative, expressed
UniProt A0A194YL17
Pfam PF11976
Panther DB PTHR10666 PTHR10666:SF155 PTHR10666
NCBI CDD KOG0005; Ubiquitin-like protein KOG0001Ubiquitin and ubiquitin-like proteins KOG0001Ubiquitin and ubiquitin-like proteins
KEGG Orthology K08770; ubiquitin C K08770ubiquitin C K04551ubiquitin B
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G05320 : polyubiquitin 10
RAP-DB (Rice) LOC_Os06g46770.1,LOC_Os06g46770.2 : ubiquitin family protein, putative, expressed
MaizeGDB (Corn) Zm00025a036147 , Zm00025a005173 , Zm00025a042947 , Zm00025a042035 , Zm00025a001454 , Zm00025a050018 , Zm00025a001458 , Zm00025a037444 , Zm00025a039850 , Zm00025a013490
Brachypodium KQJ91591 , KQJ95133 , KQJ93465 , KQK17173 , KQK04204 , KQK04203 , KQK17147 , PNT77709 , PNT77708 , KQK04197 , KQK17095 , KQK22710 , KQK07353 , KQJ89932 , KQK16840 , KQJ93464 , KQJ93343 , KQK00865 , KQK00864 , PNT65948
Barley HORVU6Hr1G026280.8 , HORVU6Hr1G026280.9 , HORVU6Hr1G026280.6 , HORVU6Hr1G026280.7 , HORVU6Hr1G026280.4 , HORVU6Hr1G026280.5 , HORVU6Hr1G026280.2 , HORVU6Hr1G026280.3 , HORVU7Hr1G103170.19 , HORVU7Hr1G103170.18 , HORVU7Hr1G103170.17 , HORVU7Hr1G103170.16 , HORVU7Hr1G103170.15 , HORVU7Hr1G103170.14 , HORVU7Hr1G103170.13 , HORVU7Hr1G103170.12 , HORVU7Hr1G103170.11 , HORVU7Hr1G103170.10 , HORVU7Hr1G102840.10 , HORVU7Hr1G102840.11 , HORVU4Hr1G001170.5 , HORVU4Hr1G001170.4 , HORVU7Hr1G113500.1 , HORVU4Hr1G065100.1 , HORVU4Hr1G001170.1 , HORVU4Hr1G001170.3 , HORVU4Hr1G001170.2 , HORVU5Hr1G019590.13 , HORVU5Hr1G019590.12 , HORVU5Hr1G019590.11 , HORVU5Hr1G019590.10 , HORVU5Hr1G019590.15 , HORVU5Hr1G019590.14 , HORVU1Hr1G043930.6 , HORVU1Hr1G043930.7 , HORVU1Hr1G043930.4 , HORVU1Hr1G043930.5 , HORVU1Hr1G043930.2 , HORVU1Hr1G043930.3 , HORVU1Hr1G043930.1 , HORVU1Hr1G043930.8 , HORVU1Hr1G043930.9 , HORVU1Hr1G043930.10 , HORVU1Hr1G043930.11 , HORVU6Hr1G020140.9 , HORVU6Hr1G020140.8 , HORVU6Hr1G020140.7 , HORVU6Hr1G020140.6 , HORVU6Hr1G020140.5 , HORVU6Hr1G020140.4 , HORVU6Hr1G020140.3 , HORVU6Hr1G020140.2 , HORVU6Hr1G020140.1 , HORVU5Hr1G072680.1 , HORVU5Hr1G072680.2 , HORVU5Hr1G072680.3 , HORVU1Hr1G023660.1 , HORVU1Hr1G023660.2 , HORVU1Hr1G023660.3 , HORVU7Hr1G029070.1 , HORVU6Hr1G026260.9 , HORVU6Hr1G026260.1 , HORVU4Hr1G065100.2 , HORVU4Hr1G065100.3 , HORVU5Hr1G019600.8 , HORVU5Hr1G019600.3 , HORVU5Hr1G019600.2 , HORVU5Hr1G019600.1 , HORVU5Hr1G019600.7 , HORVU5Hr1G019600.6 , HORVU5Hr1G019600.5 , HORVU5Hr1G019600.4 , HORVU6Hr1G026260.18 , HORVU6Hr1G026260.19 , HORVU6Hr1G026260.16 , HORVU6Hr1G026260.17 , HORVU6Hr1G026260.14 , HORVU6Hr1G026260.15 , HORVU6Hr1G026260.12 , HORVU6Hr1G026260.13 , HORVU6Hr1G026260.10 , HORVU6Hr1G026260.11 , HORVU7Hr1G103550.1 , HORVU7Hr1G103550.3 , HORVU7Hr1G103550.2 , HORVU7Hr1G103550.4 , HORVU6Hr1G026200.6 , HORVU6Hr1G026200.7 , HORVU6Hr1G026200.4 , HORVU6Hr1G026200.5 , HORVU6Hr1G026200.2 , HORVU6Hr1G026200.3 , HORVU6Hr1G026200.1 , HORVU6Hr1G026200.8 , HORVU6Hr1G026200.9 , HORVU3Hr1G014150.2 , HORVU3Hr1G014150.3 , HORVU3Hr1G014150.1 , HORVU3Hr1G014150.5 , HORVU7Hr1G102840.4 , HORVU7Hr1G102840.5 , HORVU7Hr1G102840.6 , HORVU7Hr1G102840.7 , HORVU6Hr1G026260.8 , HORVU7Hr1G102840.1 , HORVU7Hr1G102840.2 , HORVU7Hr1G102840.3 , HORVU6Hr1G026260.4 , HORVU6Hr1G026260.5 , HORVU6Hr1G026260.6 , HORVU6Hr1G026260.7 , HORVU7Hr1G102840.8 , HORVU7Hr1G102840.9 , HORVU6Hr1G026260.2 , HORVU6Hr1G026260.3 , HORVU1Hr1G087690.9 , HORVU1Hr1G087690.8 , HORVU1Hr1G087690.3 , HORVU1Hr1G087690.2 , HORVU1Hr1G087690.1 , HORVU1Hr1G087690.7 , HORVU1Hr1G087690.6 , HORVU1Hr1G087690.5 , HORVU1Hr1G087690.4 , HORVU7Hr1G103330.11 , HORVU7Hr1G103330.10 , HORVU7Hr1G103330.13 , HORVU7Hr1G103330.12 , HORVU7Hr1G103330.14 , HORVU6Hr1G026200.18 , HORVU6Hr1G026200.19 , HORVU6Hr1G026200.14 , HORVU6Hr1G026200.15 , HORVU6Hr1G026200.17 , HORVU6Hr1G026200.10 , HORVU6Hr1G026200.11 , HORVU6Hr1G026200.12 , HORVU6Hr1G026200.13 , HORVU7Hr1G107010.1 , HORVU6Hr1G026260.21 , HORVU6Hr1G026260.20 , HORVU7Hr1G103330.9 , HORVU7Hr1G103330.8 , HORVU7Hr1G103330.5 , HORVU7Hr1G103330.4 , HORVU7Hr1G103330.7 , HORVU7Hr1G103330.6 , HORVU7Hr1G103330.1 , HORVU7Hr1G103330.3 , HORVU7Hr1G103330.2 , HORVU7Hr1G103160.1 , HORVU7Hr1G103160.2 , HORVU7Hr1G103160.3 , HORVU7Hr1G103160.4 , HORVU6Hr1G016150.5 , HORVU6Hr1G016150.4 , HORVU6Hr1G016150.6 , HORVU6Hr1G016150.1 , HORVU6Hr1G016150.3 , HORVU6Hr1G016150.2 , HORVU4Hr1G040980.1 , HORVU7Hr1G029100.1 , HORVU6Hr1G021700.6 , HORVU6Hr1G021700.4 , HORVU6Hr1G021700.5 , HORVU6Hr1G021700.2 , HORVU6Hr1G021700.3 , HORVU6Hr1G021700.1 , HORVU5Hr1G019590.9 , HORVU5Hr1G019590.8 , HORVU5Hr1G019590.3 , HORVU5Hr1G019590.2 , HORVU5Hr1G019590.1 , HORVU5Hr1G019590.7 , HORVU5Hr1G019590.6 , HORVU5Hr1G019590.5 , HORVU5Hr1G019590.4 , HORVU7Hr1G103380.2 , HORVU0Hr1G025670.1 , HORVU0Hr1G025670.2 , HORVU0Hr1G025670.6 , HORVU0Hr1G025670.7 , HORVU7Hr1G103170.7 , HORVU7Hr1G103170.6 , HORVU7Hr1G103170.5 , HORVU7Hr1G103170.4 , HORVU7Hr1G103170.3 , HORVU7Hr1G103170.2 , HORVU7Hr1G103170.1 , HORVU7Hr1G103170.9 , HORVU7Hr1G103170.8 , HORVU6Hr1G026280.14 , HORVU6Hr1G026280.15 , HORVU6Hr1G026280.16 , HORVU7Hr1G029150.1 , HORVU6Hr1G026280.10 , HORVU6Hr1G026280.11 , HORVU6Hr1G026280.12 , HORVU6Hr1G026280.13 , HORVU6Hr1G029050.2 , HORVU6Hr1G029050.3 , HORVU6Hr1G029050.1 , HORVU6Hr1G029050.7 , HORVU6Hr1G029050.4 , HORVU6Hr1G029050.5 , HORVU6Hr1G029050.8 , HORVU6Hr1G029050.9 , HORVU3Hr1G014180.5 , HORVU3Hr1G014180.1 , HORVU3Hr1G014180.3 , HORVU3Hr1G014180.2 , HORVU6Hr1G026200.21 , HORVU6Hr1G026200.20 , HORVU6Hr1G026200.22 , HORVU6Hr1G026200.16 , HORVU4Hr1G061900.4 , HORVU4Hr1G061900.2 , HORVU4Hr1G061900.3 , HORVU4Hr1G061900.1 , HORVU0Hr1G038500.1 , HORVU0Hr1G038500.2 , HORVU0Hr1G038500.3 , HORVU7Hr1G109650.1 , HORVU7Hr1G109650.2 , HORVU7Hr1G103380.1 , HORVU2Hr1G048820.1 , HORVU7Hr1G103170.22 , HORVU1Hr1G082070.1 , HORVU7Hr1G103170.20 , HORVU7Hr1G103170.21 , HORVU6Hr1G076980.1 , HORVU6Hr1G014910.1 , HORVU2Hr1G048830.1 , HORVU7Hr1G029150.2 , HORVU1Hr1G087690.13 , HORVU1Hr1G087690.12 , HORVU1Hr1G087690.11 , HORVU1Hr1G087690.10 , HORVU1Hr1G087690.17 , HORVU1Hr1G087690.16 , HORVU1Hr1G087690.15 , HORVU1Hr1G087690.14 , HORVU6Hr1G014970.1 , HORVU6Hr1G014970.3 , HORVU6Hr1G014970.2 , HORVU6Hr1G014970.5 , HORVU6Hr1G014970.4 , HORVU6Hr1G014970.7 , HORVU6Hr1G014970.6 , HORVU6Hr1G014970.8 , HORVU6Hr1G016200.1 , HORVU4Hr1G029440.1
Wheat TraesCS6D02G109600 , TraesCS7D02G443100 , TraesCS7D02G474200 , TraesCS7A02G453300 , TraesCS7D02G474300 , TraesCS6A02G136700 , TraesCS4D02G006900 , TraesCS6B02G148000 , TraesCS7A02G466500 , TraesCS2A02G408500 , TraesCS2D02G405500 , TraesCS2B02G426500 , TraesCS7B02G390900 , TraesCS5D02G087500 , TraesCS6A02G087800 , TraesCS4B02G233100 , TraesCS4B02G233100 , TraesCS6A02G119700 , TraesCS6A02G119700 , TraesCSU02G018500 , TraesCS5B02G080200 , TraesCS4A02G086400 , TraesCS7B02G366600 , TraesCS4D02G218400 , TraesCS7B02G354000 , TraesCS7B02G354000 , TraesCS4B02G218100 , TraesCS6A02G087100 , TraesCS6B02G164700 , TraesCS6B02G164700 , TraesCS6B02G176000 , TraesCS4D02G218300 , TraesCS2D02G458700 , TraesCS7B02G354200 , TraesCS7B02G354100 , TraesCS4B02G008400 , TraesCS6B02G110300 , TraesCS7A02G453400 , TraesCS7B02G413800 , TraesCS7A02G453600 , TraesCS6D02G136800 , TraesCS6A02G112400 , TraesCS5D02G269800 , TraesCS6A02G147500 , TraesCS4D02G234300 , TraesCS4D02G234300 , TraesCS7B02G366700 , TraesCS6B02G140600 , TraesCS2D02G580700 , TraesCS6D02G248600 , TraesCS4A02G086300 , TraesCS7A02G453500 , TraesCSU02G019400 , TraesCS5A02G073800 , TraesCS7D02G494400 , TraesCS6D02G125600 , TraesCS7B02G390800 , TraesCS4A02G077000 , TraesCS4A02G077000 , TraesCS2A02G408200 , TraesCS7A02G506300 , TraesCS4B02G218000 , TraesCS5B02G260700 , TraesCS4A02G306500 , TraesCS7A02G487500 , TraesCS1D02G228700
Populus PNT59589 , PNT59588 , PNT10630 , PNT04278 , PNT28507 , PNT28506 , PNS95081 , PNS95080 , PNS95082 , PNS95078 , PNS95079 , PNS95075 , PNS95076 , PNS95077 , PNT13284 , PNT13285 , PNT13286 , PNT13287 , PNT13281 , PNT13282 , PNT13283 , PNT13288 , PNT13289 , PNT01621 , PNT13292 , PNT13291 , PNT13290 , PNT50492 , PNT59598 , PNT59599 , PNT59596 , PNT59597 , PNT59594 , PNT59595 , PNT59592 , PNT59593 , PNT59590 , PNT59591 , PNT59600


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cDNA sequences
Sobic.010G232100


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G055200 phosphoglycerate kinase protein, putative, expressed K00927: PGK, phosphoglycerate kinase
2 Sobic.008G025500 DUF567 domain containing protein, putative, expressed -
3 Sobic.003G130800 pyruvate kinase, putative, expressed K00873: PK, pyruvate kinase
4 Sobic.010G178200 hemoglobin-like protein HbO, putative, expressed -
5 Sobic.006G180200 transmembrane amino acid transporter protein, putative, expressed K14209: SLC36A, solute carrier family 36 (proton-coupled amino acid transporter)
6 Sobic.009G046600 stress-related protein, putative, expressed -
7 Sobic.003G380000 expressed protein -
8 Sobic.004G219300 GLTP domain containing protein, putative, expressed -
9 Sobic.006G099700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@serine hydrolase domain containing protein, expressed -
10 Sobic.004G330700 CAF1 family ribonuclease containing protein, putative, expressed K12581: CNOT7_8, CAF1, CCR4-NOT transcription complex subunit 7/8
11 Sobic.008G033600 Pyruvate kinase family protein(PubMedID : 26465154)@pyruvate kinase, putative, expressed K00873: PK, pyruvate kinase
12 Sobic.001G459200 MYB family transcription factor, putative, expressed -
13 Sobic.001G040800 ADP-ribosylation factor, putative, expressed K07937: ADP-ribosylation factor 1/2
K07977: Arf/Sar family, other
14 Sobic.007G088000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@NADPH reductase, putative, expressed K00327: NADPH-ferrihemoprotein reductase
15 Sobic.009G203100 expressed protein -
16 Sobic.005G034400 pyruvate kinase, putative, expressed K00873: PK, pyruvate kinase
17 Sobic.002G312400 domain of unknown function domain containing protein, expressed -
18 Sobic.010G135000 thioredoxin reductase 2, putative, expressed K00384: trxB, thioredoxin reductase (NADPH)
19 Sobic.003G377900 chitin-inducible gibberellin-responsive protein, putative, expressed -
20 Sobic.009G185800 translation initiation factor SUI1, putative, expressed K03113: EIF1, translation initiation factor 1


Gene co-expression network
sample Sobic010G232100 Sobic010G232100 Sobic004G055200 Sobic004G055200 Sobic010G232100--Sobic004G055200 Sobic008G025500 Sobic008G025500 Sobic010G232100--Sobic008G025500 Sobic003G130800 Sobic003G130800 Sobic010G232100--Sobic003G130800 Sobic010G178200 Sobic010G178200 Sobic010G232100--Sobic010G178200 Sobic006G180200 Sobic006G180200 Sobic010G232100--Sobic006G180200 Sobic009G046600 Sobic009G046600 Sobic010G232100--Sobic009G046600 Sobic003G380000 Sobic003G380000 Sobic010G232100--Sobic003G380000 Sobic004G219300 Sobic004G219300 Sobic010G232100--Sobic004G219300 Sobic006G099700 Sobic006G099700 Sobic010G232100--Sobic006G099700 Sobic008G033600 Sobic008G033600 Sobic004G055200--Sobic008G033600 Sobic001G459200 Sobic001G459200 Sobic004G055200--Sobic001G459200 Sobic004G055200--Sobic003G130800 Sobic004G330700 Sobic004G330700 Sobic004G055200--Sobic004G330700 Sobic001G281400 Sobic001G281400 Sobic004G055200--Sobic001G281400 Sobic004G187900 Sobic004G187900 Sobic004G055200--Sobic004G187900 Sobic001G499300 Sobic001G499300 Sobic004G055200--Sobic001G499300 Sobic001G477300 Sobic001G477300 Sobic004G055200--Sobic001G477300 Sobic007G051000 Sobic007G051000 Sobic004G055200--Sobic007G051000 Sobic008G025500--Sobic006G099700 Sobic008G025500--Sobic010G232100 Sobic007G088000 Sobic007G088000 Sobic008G025500--Sobic007G088000 Sobic003G279500 Sobic003G279500 Sobic008G025500--Sobic003G279500 Sobic008G025500--Sobic004G187900 Sobic003G377900 Sobic003G377900 Sobic008G025500--Sobic003G377900 Sobic003G279300 Sobic003G279300 Sobic008G025500--Sobic003G279300 Sobic003G288600 Sobic003G288600 Sobic008G025500--Sobic003G288600 Sobic002G261100 Sobic002G261100 Sobic008G025500--Sobic002G261100 Sobic009G185800 Sobic009G185800 Sobic003G130800--Sobic009G185800 Sobic003G253000 Sobic003G253000 Sobic003G130800--Sobic003G253000 Sobic003G130800--Sobic001G459200 Sobic003G130800--Sobic006G180200 Sobic002G345300 Sobic002G345300 Sobic003G130800--Sobic002G345300 Sobic004G049900 Sobic004G049900 Sobic003G130800--Sobic004G049900 Sobic003G130800--Sobic004G055200 Sobic010G135000 Sobic010G135000 Sobic003G130800--Sobic010G135000 Sobic003G181500 Sobic003G181500 Sobic003G130800--Sobic003G181500 Sobic010G178200--Sobic002G345300 Sobic003G285800 Sobic003G285800 Sobic010G178200--Sobic003G285800 Sobic003G350300 Sobic003G350300 Sobic010G178200--Sobic003G350300 Sobic010G041600 Sobic010G041600 Sobic010G178200--Sobic010G041600 Sobic001G034700 Sobic001G034700 Sobic010G178200--Sobic001G034700 Sobic010G178200--Sobic001G281400 Sobic002G046100 Sobic002G046100 Sobic010G178200--Sobic002G046100 Sobic010G274900 Sobic010G274900 Sobic010G178200--Sobic010G274900 Sobic007G087200 Sobic007G087200 Sobic010G178200--Sobic007G087200 Sobic006G180200--Sobic003G130800 Sobic006G180200--Sobic010G135000 Sobic006G180200--Sobic009G185800 Sobic006G180200--Sobic004G055200 Sobic001G131400 Sobic001G131400 Sobic006G180200--Sobic001G131400 Sobic006G180200--Sobic008G033600 Sobic006G180200--Sobic004G187900 Sobic006G180200--Sobic003G181500 Sobic008G189300 Sobic008G189300 Sobic006G180200--Sobic008G189300 Sobic004G157000 Sobic004G157000 Sobic009G046600--Sobic004G157000 Sobic005G028700 Sobic005G028700 Sobic009G046600--Sobic005G028700 Sobic009G129000 Sobic009G129000 Sobic009G046600--Sobic009G129000 Sobic001G399100 Sobic001G399100 Sobic009G046600--Sobic001G399100 Sobic010G041700 Sobic010G041700 Sobic009G046600--Sobic010G041700 Sobic009G023200 Sobic009G023200 Sobic009G046600--Sobic009G023200 Sobic002G245800 Sobic002G245800 Sobic009G046600--Sobic002G245800 Sobic009G046600--Sobic010G178200 Sobic007G151100 Sobic007G151100 Sobic009G046600--Sobic007G151100 Sobic003G380000--Sobic010G232100 Sobic005G228000 Sobic005G228000 Sobic003G380000--Sobic005G228000 Sobic003G380000--Sobic002G345300 Sobic003G380000--Sobic010G178200 Sobic003G380000--Sobic003G285800 Sobic003G380000--Sobic010G135000 Sobic003G380000--Sobic009G046600 Sobic003G380000--Sobic004G157000 Sobic003G380000--Sobic002G046100 Sobic004G219300--Sobic001G459200 Sobic004G219300--Sobic003G130800 Sobic004G219300--Sobic004G330700 Sobic004G219300--Sobic010G135000 Sobic004G219300--Sobic004G055200 Sobic004G219300--Sobic009G185800 Sobic004G219300--Sobic008G033600 Sobic004G219300--Sobic010G232100 Sobic004G219300--Sobic006G180200 Sobic006G099700--Sobic008G025500 Sobic006G099700--Sobic007G088000 Sobic006G099700--Sobic010G232100 Sobic010G165500 Sobic010G165500 Sobic006G099700--Sobic010G165500 Sobic001G393500 Sobic001G393500 Sobic006G099700--Sobic001G393500 Sobic006G099700--Sobic004G330700 Sobic006G099700--Sobic003G279300 Sobic006G099700--Sobic001G499300 Sobic006G099700--Sobic004G187900
Octagon: transcription factors


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