Gene annotation
Transcriptome id Sobic.004G219300.1
Synonym Sb04g026420, GLTP1, ATGLTP1
Functional annotation GLTP domain containing protein, putative, expressed
UniProt C5XXS7
Pfam PF08718
Panther DB PTHR10219 PTHR10219:SF36
NCBI CDD KOG3221; Glycolipid transfer protein
KEGG Orthology -
Gene Ontology GO:0017089; glycolipid transfer activity GO:0005737cytoplasm


Orthologs (automatic annotation)
TAIR AT2G33470 : glycolipid transfer protein 1
RAP-DB (Rice) LOC_Os07g26460.1 : GLTP domain containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a041572 , Zm00025a032016
Brachypodium KQK00396 , PNT76658
Barley HORVU6Hr1G058570.2
Wheat TraesCS6D02G209500 , TraesCS6A02G224700 , TraesCS6B02G256700
Populus -


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cDNA sequences
Sobic.004G219300


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G459200 MYB family transcription factor, putative, expressed -
2 Sobic.003G130800 pyruvate kinase, putative, expressed K00873: PK, pyruvate kinase
3 Sobic.004G330700 CAF1 family ribonuclease containing protein, putative, expressed K12581: CNOT7_8, CAF1, CCR4-NOT transcription complex subunit 7/8
4 Sobic.010G135000 thioredoxin reductase 2, putative, expressed K00384: trxB, thioredoxin reductase (NADPH)
5 Sobic.004G055200 phosphoglycerate kinase protein, putative, expressed K00927: PGK, phosphoglycerate kinase
6 Sobic.009G185800 translation initiation factor SUI1, putative, expressed K03113: EIF1, translation initiation factor 1
7 Sobic.008G033600 Pyruvate kinase family protein(PubMedID : 26465154)@pyruvate kinase, putative, expressed K00873: PK, pyruvate kinase
8 Sobic.010G232100 Constitutively expressed genes(PubMedID : 24456189)@ubiquitin family protein, putative, expressed K08770: ubiquitin C
K08770: ubiquitin C
K04551: ubiquitin B
9 Sobic.006G180200 transmembrane amino acid transporter protein, putative, expressed K14209: SLC36A, solute carrier family 36 (proton-coupled amino acid transporter)
10 Sobic.002G291200 UDP-glucose Pyrophosphorylase(PubMedID : 26616172)@UTP--glucose-1-phosphate uridylyltransferase, putative, expressed K00963: UGP2, galU, UTP--glucose-1-phosphate uridylyltransferase
11 Sobic.010G185500 ethanol tolerance protein GEKO1, putative, expressed K09716: dtdA, D-aminoacyl-tRNA deacylase
12 Sobic.002G194100 annexin, putative, expressed K17095: annexin A7/11
13 Sobic.003G337000 ubiquitin-conjugating enzyme, putative, expressed K06689: UBE2D, UBC4, ubiquitin-conjugating enzyme E2 D
14 Sobic.009G203100 expressed protein -
15 Sobic.003G136000 OsRhmbd3 - Putative Rhomboid homologue, expressed K09651: rhomboid domain-containing protein 1
16 Sobic.010G178200 hemoglobin-like protein HbO, putative, expressed -
17 Sobic.003G253000 ubiquitin-conjugating enzyme, putative, expressed K10580: UBE2N, BLU, ubiquitin-conjugating enzyme E2 N
18 Sobic.001G499300 high-affinity nickel-transport family protein, putative, expressed -
19 Sobic.002G134001 - K14490: histidine-containing phosphotransfer peotein
20 Sobic.006G232200 SNARE domain containing protein, putative, expressed K08501: syntaxin 8
K08503: syntaxin of plants SYP5


Gene co-expression network
sample Sobic004G219300 Sobic004G219300 Sobic001G459200 Sobic001G459200 Sobic004G219300--Sobic001G459200 Sobic003G130800 Sobic003G130800 Sobic004G219300--Sobic003G130800 Sobic004G330700 Sobic004G330700 Sobic004G219300--Sobic004G330700 Sobic010G135000 Sobic010G135000 Sobic004G219300--Sobic010G135000 Sobic004G055200 Sobic004G055200 Sobic004G219300--Sobic004G055200 Sobic009G185800 Sobic009G185800 Sobic004G219300--Sobic009G185800 Sobic008G033600 Sobic008G033600 Sobic004G219300--Sobic008G033600 Sobic010G232100 Sobic010G232100 Sobic004G219300--Sobic010G232100 Sobic006G180200 Sobic006G180200 Sobic004G219300--Sobic006G180200 Sobic001G459200--Sobic009G185800 Sobic003G253000 Sobic003G253000 Sobic001G459200--Sobic003G253000 Sobic001G499300 Sobic001G499300 Sobic001G459200--Sobic001G499300 Sobic001G459200--Sobic004G055200 Sobic002G267500 Sobic002G267500 Sobic001G459200--Sobic002G267500 Sobic002G046100 Sobic002G046100 Sobic001G459200--Sobic002G046100 Sobic004G272800 Sobic004G272800 Sobic001G459200--Sobic004G272800 Sobic003G181500 Sobic003G181500 Sobic001G459200--Sobic003G181500 Sobic001G459200--Sobic003G130800 Sobic003G130800--Sobic009G185800 Sobic003G130800--Sobic003G253000 Sobic003G130800--Sobic001G459200 Sobic003G130800--Sobic006G180200 Sobic002G345300 Sobic002G345300 Sobic003G130800--Sobic002G345300 Sobic004G049900 Sobic004G049900 Sobic003G130800--Sobic004G049900 Sobic003G130800--Sobic004G055200 Sobic003G130800--Sobic010G135000 Sobic003G130800--Sobic003G181500 Sobic004G330700--Sobic004G055200 Sobic004G330700--Sobic001G459200 Sobic004G330700--Sobic009G185800 Sobic001G393500 Sobic001G393500 Sobic004G330700--Sobic001G393500 Sobic004G330700--Sobic003G130800 Sobic004G330700--Sobic001G499300 Sobic004G330700--Sobic003G181500 Sobic004G330700--Sobic010G135000 Sobic003G136000 Sobic003G136000 Sobic004G330700--Sobic003G136000 Sobic010G135000--Sobic003G130800 Sobic010G135000--Sobic006G180200 Sobic010G135000--Sobic002G345300 Sobic010G135000--Sobic003G181500 Sobic010G135000--Sobic001G459200 Sobic009G023200 Sobic009G023200 Sobic010G135000--Sobic009G023200 Sobic003G350300 Sobic003G350300 Sobic010G135000--Sobic003G350300 Sobic010G135000--Sobic004G330700 Sobic010G135000--Sobic009G185800 Sobic004G055200--Sobic008G033600 Sobic004G055200--Sobic001G459200 Sobic004G055200--Sobic003G130800 Sobic004G055200--Sobic004G330700 Sobic001G281400 Sobic001G281400 Sobic004G055200--Sobic001G281400 Sobic004G187900 Sobic004G187900 Sobic004G055200--Sobic004G187900 Sobic004G055200--Sobic001G499300 Sobic001G477300 Sobic001G477300 Sobic004G055200--Sobic001G477300 Sobic007G051000 Sobic007G051000 Sobic004G055200--Sobic007G051000 Sobic009G185800--Sobic001G459200 Sobic009G185800--Sobic004G049900 Sobic009G185800--Sobic003G253000 Sobic009G185800--Sobic003G130800 Sobic006G108400 Sobic006G108400 Sobic009G185800--Sobic006G108400 Sobic009G185800--Sobic003G350300 Sobic009G185800--Sobic004G330700 Sobic009G185800--Sobic004G272800 Sobic009G185800--Sobic003G181500 Sobic008G033600--Sobic004G055200 Sobic006G173900 Sobic006G173900 Sobic008G033600--Sobic006G173900 Sobic008G033600--Sobic004G187900 Sobic008G033600--Sobic001G281400 Sobic008G033600--Sobic002G267500 Sobic003G377900 Sobic003G377900 Sobic008G033600--Sobic003G377900 Sobic009G008900 Sobic009G008900 Sobic008G033600--Sobic009G008900 Sobic008G033600--Sobic001G459200 Sobic010G149300 Sobic010G149300 Sobic008G033600--Sobic010G149300 Sobic010G232100--Sobic004G055200 Sobic008G025500 Sobic008G025500 Sobic010G232100--Sobic008G025500 Sobic010G232100--Sobic003G130800 Sobic010G178200 Sobic010G178200 Sobic010G232100--Sobic010G178200 Sobic010G232100--Sobic006G180200 Sobic009G046600 Sobic009G046600 Sobic010G232100--Sobic009G046600 Sobic003G380000 Sobic003G380000 Sobic010G232100--Sobic003G380000 Sobic010G232100--Sobic004G219300 Sobic006G099700 Sobic006G099700 Sobic010G232100--Sobic006G099700 Sobic006G180200--Sobic003G130800 Sobic006G180200--Sobic010G135000 Sobic006G180200--Sobic009G185800 Sobic006G180200--Sobic004G055200 Sobic001G131400 Sobic001G131400 Sobic006G180200--Sobic001G131400 Sobic006G180200--Sobic008G033600 Sobic006G180200--Sobic004G187900 Sobic006G180200--Sobic003G181500 Sobic008G189300 Sobic008G189300 Sobic006G180200--Sobic008G189300
Octagon: transcription factors


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