Gene annotation
Transcriptome id Sobic.002G134001.1
Synonym -
Functional annotation -
UniProt A0A1W0W3T5
Pfam PF01627
Panther DB PTHR28242 PTHR28242:SF6
NCBI CDD KOG4747; Two-component phosphorelay intermediate involved in MAP kinase cascade regulation
KEGG Orthology K14490; histidine-containing phosphotransfer peotein
Gene Ontology GO:0004871; obsolete signal transducer activity GO:0000160phosphorelay signal transduction system


Orthologs (automatic annotation)
TAIR AT1G03430 : histidine-containing phosphotransfer factor 5
RAP-DB (Rice) LOC_Os09g39400.1 : histidine-containing phosphotransfer protein, putative, expressed
MaizeGDB (Corn) Zm00025a013495
Brachypodium -
Barley HORVU7Hr1G049600.1 , HORVU4Hr1G051390.1 , HORVU4Hr1G051390.2 , HORVU3Hr1G008710.1
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G229200 "domain confirmed by Pfam database, expression supported by NCBI EST database, expressed in root, expression induced by IAA and BR treatments"(PubMedID : 20499123)@OsIAA19 - Auxin-responsive Aux/IAA gene family member, expressed K14484: auxin-responsive protein IAA
2 Sobic.009G174900 ubiquitin-conjugating enzyme, putative, expressed K06689: UBE2D, UBC4, ubiquitin-conjugating enzyme E2 D
3 Sobic.003G337000 ubiquitin-conjugating enzyme, putative, expressed K06689: UBE2D, UBC4, ubiquitin-conjugating enzyme E2 D
4 Sobic.006G212100 expressed protein -
5 Sobic.004G079100 zinc finger A20 and AN1 domain-containing stress-associated protein, putative, expressed -
6 Sobic.009G005900 actin, putative, expressed K10355: actin, other eukaryote
7 Sobic.001G433400 Zinc finger, C3HC4 type domain containing protein, expressed -
8 Sobic.001G007200 HSF-type DNA-binding domain containing protein, expressed K09419: heat shock transcription factor, other eukaryote
9 Sobic.002G400000 MBTB14 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed K10523: speckle-type POZ protein
10 Sobic.007G186300 ankyrin repeat domain containing protein, putative, expressed -
11 Sobic.009G146100 RNA recognition motif containing protein, putative, expressed K12831: SF3B4, splicing factor 3B subunit 4
12 Sobic.002G045300 ubiquitin-conjugating enzyme, putative, expressed K10573: UBE2A, UBC2, ubiquitin-conjugating enzyme E2 A
13 Sobic.004G130100 ubiquitin-conjugating enzyme, putative, expressed K10704: ubiquitin-conjugating enzyme E2 variant
14 Sobic.001G106700 expressed protein -
15 Sobic.001G314500 ubiquitin-conjugating enzyme, putative, expressed K10577: UBE2I, ubiquitin-conjugating enzyme E2 I
16 Sobic.003G115800 miro, putative, expressed K07953: GTP-binding protein SAR1
17 Sobic.010G083700 formin-binding protein-related, putative, expressed K13220: WBP4, WW domain-binding protein 4
18 Sobic.003G130800 pyruvate kinase, putative, expressed K00873: PK, pyruvate kinase
19 Sobic.006G232200 SNARE domain containing protein, putative, expressed K08501: syntaxin 8
K08503: syntaxin of plants SYP5
20 Sobic.001G415500 zinc finger, C3HC4 type domain containing protein, expressed K13125: nitric oxide synthase-interacting protein


Gene co-expression network
sample Sobic002G134001 Sobic002G134001 Sobic009G229200 Sobic009G229200 Sobic002G134001--Sobic009G229200 Sobic009G174900 Sobic009G174900 Sobic002G134001--Sobic009G174900 Sobic003G337000 Sobic003G337000 Sobic002G134001--Sobic003G337000 Sobic006G212100 Sobic006G212100 Sobic002G134001--Sobic006G212100 Sobic004G079100 Sobic004G079100 Sobic002G134001--Sobic004G079100 Sobic009G005900 Sobic009G005900 Sobic002G134001--Sobic009G005900 Sobic001G433400 Sobic001G433400 Sobic002G134001--Sobic001G433400 Sobic001G007200 Sobic001G007200 Sobic002G134001--Sobic001G007200 Sobic002G400000 Sobic002G400000 Sobic002G134001--Sobic002G400000 Sobic009G229200--Sobic002G134001 Sobic004G203400 Sobic004G203400 Sobic009G229200--Sobic004G203400 Sobic003G264200 Sobic003G264200 Sobic009G229200--Sobic003G264200 Sobic009G165800 Sobic009G165800 Sobic009G229200--Sobic009G165800 Sobic001G391600 Sobic001G391600 Sobic009G229200--Sobic001G391600 Sobic009G229200--Sobic009G005900 Sobic004G130100 Sobic004G130100 Sobic009G229200--Sobic004G130100 Sobic003G010400 Sobic003G010400 Sobic009G229200--Sobic003G010400 Sobic009G229200--Sobic009G174900 Sobic009G174900--Sobic003G337000 Sobic009G174900--Sobic002G400000 Sobic004G327300 Sobic004G327300 Sobic009G174900--Sobic004G327300 Sobic009G135600 Sobic009G135600 Sobic009G174900--Sobic009G135600 Sobic007G168600 Sobic007G168600 Sobic009G174900--Sobic007G168600 Sobic009G174900--Sobic006G212100 Sobic001G491100 Sobic001G491100 Sobic009G174900--Sobic001G491100 Sobic009G174900--Sobic002G134001 Sobic001G054200 Sobic001G054200 Sobic009G174900--Sobic001G054200 Sobic003G337000--Sobic009G174900 Sobic001G415500 Sobic001G415500 Sobic003G337000--Sobic001G415500 Sobic003G337000--Sobic001G054200 Sobic006G232200 Sobic006G232200 Sobic003G337000--Sobic006G232200 Sobic008G161800 Sobic008G161800 Sobic003G337000--Sobic008G161800 Sobic004G248800 Sobic004G248800 Sobic003G337000--Sobic004G248800 Sobic003G253000 Sobic003G253000 Sobic003G337000--Sobic003G253000 Sobic009G185800 Sobic009G185800 Sobic003G337000--Sobic009G185800 Sobic003G337000--Sobic009G135600 Sobic006G212100--Sobic001G054200 Sobic009G198500 Sobic009G198500 Sobic006G212100--Sobic009G198500 Sobic001G314500 Sobic001G314500 Sobic006G212100--Sobic001G314500 Sobic006G263900 Sobic006G263900 Sobic006G212100--Sobic006G263900 Sobic006G212100--Sobic002G400000 Sobic006G212100--Sobic007G168600 Sobic006G212100--Sobic009G174900 Sobic010G083700 Sobic010G083700 Sobic006G212100--Sobic010G083700 Sobic001G005900 Sobic001G005900 Sobic006G212100--Sobic001G005900 Sobic004G293700 Sobic004G293700 Sobic004G079100--Sobic004G293700 Sobic001G138300 Sobic001G138300 Sobic004G079100--Sobic001G138300 Sobic004G079100--Sobic001G054200 Sobic004G079100--Sobic010G083700 Sobic003G115800 Sobic003G115800 Sobic004G079100--Sobic003G115800 Sobic007G186300 Sobic007G186300 Sobic004G079100--Sobic007G186300 Sobic009G246950 Sobic009G246950 Sobic004G079100--Sobic009G246950 Sobic009G171700 Sobic009G171700 Sobic004G079100--Sobic009G171700 Sobic001G371300 Sobic001G371300 Sobic004G079100--Sobic001G371300 Sobic009G005900--Sobic009G174900 Sobic009G005900--Sobic009G135600 Sobic004G321900 Sobic004G321900 Sobic009G005900--Sobic004G321900 Sobic009G005900--Sobic001G433400 Sobic009G005900--Sobic002G400000 Sobic009G005900--Sobic002G134001 Sobic001G461900 Sobic001G461900 Sobic009G005900--Sobic001G461900 Sobic009G005900--Sobic003G010400 Sobic009G005900--Sobic006G212100 Sobic002G045300 Sobic002G045300 Sobic001G433400--Sobic002G045300 Sobic001G433400--Sobic002G400000 Sobic003G367451 Sobic003G367451 Sobic001G433400--Sobic003G367451 Sobic009G146100 Sobic009G146100 Sobic001G433400--Sobic009G146100 Sobic001G433400--Sobic009G135600 Sobic001G433400--Sobic003G253000 Sobic003G220600 Sobic003G220600 Sobic001G433400--Sobic003G220600 Sobic001G433400--Sobic004G327300 Sobic001G433400--Sobic007G186300 Sobic001G007200--Sobic010G083700 Sobic001G007200--Sobic001G415500 Sobic001G007200--Sobic007G186300 Sobic010G253800 Sobic010G253800 Sobic001G007200--Sobic010G253800 Sobic004G086600 Sobic004G086600 Sobic001G007200--Sobic004G086600 Sobic001G073000 Sobic001G073000 Sobic001G007200--Sobic001G073000 Sobic001G007200--Sobic009G246950 Sobic004G141700 Sobic004G141700 Sobic001G007200--Sobic004G141700 Sobic001G007200--Sobic009G146100 Sobic002G400000--Sobic007G168600 Sobic003G077900 Sobic003G077900 Sobic002G400000--Sobic003G077900 Sobic002G400000--Sobic009G198500 Sobic004G130900 Sobic004G130900 Sobic002G400000--Sobic004G130900 Sobic002G400000--Sobic001G433400 Sobic001G395400 Sobic001G395400 Sobic002G400000--Sobic001G395400 Sobic002G400000--Sobic004G327300 Sobic009G004600 Sobic009G004600 Sobic002G400000--Sobic009G004600 Sobic010G000900 Sobic010G000900 Sobic002G400000--Sobic010G000900
Octagon: transcription factors


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